RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 CDK5RAP3Q96JB5 506 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 MTRQ99707 1265 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 PYM1Q9BRP8 204 aaKnown RBP12.69□□□□□ -0.38
VMP1-207ENST00000588131 PDGFCQ9NRA1 345 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 BLOC1S4Q9NUP1 217 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 RGL1Q9NZL6 768 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 FLRT1Q9NZU1 646 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 USP25Q9UHP3 1055 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 DOCK3Q8IZD9 2030 aa12.69□□□□□ -0.38
VMP1-207ENST00000588131 KDM3AQ9Y4C1 1321 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 A0A087WWV3 80 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 SLC26A4O43511 780 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 HSPA6P17066 643 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 RPA1P27694 616 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 CASP1P29466 404 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 RGS2P41220 211 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 AFMP43652 599 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 ZNF445P59923 1031 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 KRT76Q01546 638 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 SP3Q02447 781 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 PNOCQ13519 176 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 CTTNQ14247 550 aaKnown RBP12.68□□□□□ -0.38
VMP1-207ENST00000588131 CCL14Q16627 93 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 LY6KQ17RY6 165 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 TMEM63BQ5T3F8 832 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 TAPT1Q6NXT6 567 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 POTEGQ6S5H5 508 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 ELOA2Q8IYF1 753 aaPredicted RBP12.68□□□□□ -0.38
VMP1-207ENST00000588131 CEP57L1Q8IYX8 460 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 SOCS4Q8WXH5 440 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 HSD17B14Q9BPX1 270 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 TINF2Q9BSI4 451 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 POLR3CQ9BUI4 534 aaPredicted RBP12.68□□□□□ -0.38
VMP1-207ENST00000588131 JPH1Q9HDC5 661 aaPredicted RBP12.68□□□□□ -0.38
VMP1-207ENST00000588131 SLC5A4Q9NY91 659 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 WRAP73Q9P2S5 460 aaPredicted RBP12.68□□□□□ -0.38
VMP1-207ENST00000588131 DDX41Q9UJV9 622 aaKnown RBP12.68□□□□□ -0.38
VMP1-207ENST00000588131 GABRQQ9UN88 632 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 KIAA1024Q9UPX6 916 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 STK24Q9Y6E0 443 aa12.68□□□□□ -0.38
VMP1-207ENST00000588131 SYNGAP1Q96PV0 1343 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 E9PMD0 336 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 SLITRK3O94933 977 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 LETM1O95202 739 aaPredicted RBP12.67□□□□□ -0.38
VMP1-207ENST00000588131 PTGS1P23219 599 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 SP4Q02446 784 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 MCM6Q14566 821 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 POSTNQ15063 836 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 ZNF746Q6NUN9 644 aaPredicted RBP12.67□□□□□ -0.38
VMP1-207ENST00000588131 KANK3Q6NY19 840 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 CCDC62Q6P9F0 684 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 CYFIP1Q7L576 1253 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 BANK1Q8NDB2 785 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 RAD54LQ92698 747 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 COPS5Q92905 334 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 APBA2Q99767 749 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 SENP7Q9BQF6 1050 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 ANP32EQ9BTT0 268 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 FUCA2Q9BTY2 467 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 CUEDC2Q9H467 287 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 TUFT1Q9NNX1 390 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 VTA1Q9NP79 307 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 SLC9A2Q9UBY0 812 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 STK17AQ9UEE5 414 aa12.67□□□□□ -0.38
VMP1-207ENST00000588131 RBM47A0AV96 593 aaKnown RBP12.66□□□□□ -0.38
VMP1-207ENST00000588131 WDR64B1ANS9 1081 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 GPR25O00155 361 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 FARP2O94887 1054 aaPredicted RBP12.66□□□□□ -0.38
VMP1-207ENST00000588131 GGPS1O95749 300 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 IGHA2P01877 340 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 TXNP10599 105 aaKnown RBP12.66□□□□□ -0.38
VMP1-207ENST00000588131 TGFB3P10600 412 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 ADCYAP1R1P41586 468 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 JAK3P52333 1124 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 ACTR2P61160 394 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 PSMC6P62333 389 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 PRKCZQ05513 592 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 NEDD9Q14511 834 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 DHX8Q14562 1220 aaKnown RBP12.66□□□□□ -0.38
VMP1-207ENST00000588131 UGCGQ16739 394 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 KCNV1Q6PIU1 500 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 TPH2Q8IWU9 490 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 MSL3Q8N5Y2 521 aaKnown RBP12.66□□□□□ -0.38
VMP1-207ENST00000588131 CD99L2Q8TCZ2 262 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 NEK9Q8TD19 979 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 SCFD2Q8WU76 684 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 LXNQ9BS40 222 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 NT5C3AQ9H0P0 336 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 BLZF1Q9H2G9 400 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 KBTBD4Q9NVX7 518 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 KIAA1468Q9P260 1216 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 TCEAL9Q9UHQ7 104 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 SAMM50Q9Y512 469 aa12.66□□□□□ -0.38
VMP1-207ENST00000588131 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.65□□□□□ -0.38
VMP1-207ENST00000588131 GTPBP6O43824 516 aaPredicted RBP12.65□□□□□ -0.38
VMP1-207ENST00000588131 P4HBP07237 508 aaKnown RBP12.65□□□□□ -0.38
VMP1-207ENST00000588131 SFNP31947 248 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 CYP2C19P33261 490 aa12.65□□□□□ -0.38
VMP1-207ENST00000588131 FLT3LGP49771 235 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms