RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 ST18O60284 1047 aa13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 PPFIA3O75145 1194 aa13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 USP11P51784 963 aa13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 KRT76Q01546 638 aa13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 NONOQ15233 471 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 C8orf34Q49A92 452 aa13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 MIS18BP1Q6P0N0 1132 aa13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 TAF2Q6P1X5 1199 aa13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 RSPH3Q86UC2 560 aa13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 TRIM50Q86XT4 487 aa13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 SMAP1Q8IYB5 467 aaPredicted RBP13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 BLIDQ8IZY5 108 aa13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 LRCH3Q96II8 777 aa13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 LARP6Q9BRS8 491 aaKnown RBP13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 WNT8AQ9H1J5 351 aa13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 ORC3Q9UBD5 711 aaPredicted RBP13.31□□□□□ -0.28
PRKCSH-206ENST00000587509 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 ZBBXA8MT70 800 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 SOX1O00570 391 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 BACH1O14867 736 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 EFCAB14O75071 495 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 ATP9AO75110 1047 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 BAIAP3O94812 1187 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 IQCF3P0C7M6 154 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 CIITAP33076 1130 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 ACTR2P61160 394 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 PPFIA1Q13136 1202 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 RAB30Q15771 203 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 PRR16Q569H4 304 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 TMEM240Q5SV17 173 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 FAM109BQ6ICB4 259 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 ZNF365Q70YC5 407 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 SERINC5Q86VE9 423 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 HERVK_113Q902F9 699 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 SCLYQ96I15 445 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 ZSCAN31Q96LW9 406 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 FTOQ9C0B1 505 aaKnown RBP eCLIP13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 SH2B1Q9NRF2 756 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 LIMCH1Q9UPQ0 1083 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 UMODL1Q5DID0 1318 aa13.3□□□□□ -0.28
PRKCSH-206ENST00000587509 RRN3P2A6NIE6 340 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 FAM86B1E9PN63 330 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 FAM86B2P0C5J1 330 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 GCFC2P16383 781 aaKnown RBP13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 HOXC8P31273 242 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 KCNJ6P48051 423 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 EPHB4P54760 987 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 RABEP1Q15276 862 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 ZNF746Q6NUN9 644 aaPredicted RBP13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 MOXD1Q6UVY6 613 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 PLPPR4Q7Z2D5 763 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 DEFB128Q7Z7B8 93 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 RASGRP4Q8TDF6 673 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 TBCKQ8TEA7 893 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 CRYGNQ8WXF5 182 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 KIF3AQ9Y496 699 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 SLC4A7Q9Y6M7 1214 aa13.29□□□□□ -0.28
PRKCSH-206ENST00000587509 IGLV3-22A0A075B6J6 115 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 WDR64B1ANS9 1081 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 DDX39AO00148 427 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 GAS7O60861 476 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 LGR5O75473 907 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 ARP10275 920 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 ACRP10323 421 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 CKBP12277 381 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 MARK3P27448 753 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 KRT2P35908 639 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 THPOP40225 353 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 RBM25P49756 843 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 STAT5BP51692 787 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 JAK3P52333 1124 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 HMGN5P82970 282 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 ITGB3BPQ13352 177 aaPredicted RBP13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 SAFBQ15424 915 aaKnown RBP eCLIP13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 ME3Q16798 604 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 OTOP2Q7RTS6 562 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 DEFB123Q8N688 67 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 CYP2W1Q8TAV3 490 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 LMBR1Q8WVP7 490 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 FAM167AQ96KS9 214 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 SLC9A7Q96T83 725 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 RIT2Q99578 217 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 LLPHQ9BRT6 129 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 PHF20Q9BVI0 1012 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 PCDH10Q9P2E7 1040 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 MSRAQ9UJ68 235 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 TUBE1Q9UJT0 475 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 SAMM50Q9Y512 469 aa13.28□□□□□ -0.28
PRKCSH-206ENST00000587509 GSTTP1A0A1W2PQM5 241 aa13.27□□□□□ -0.29
PRKCSH-206ENST00000587509 M0QZ92 97 aa13.27□□□□□ -0.29
PRKCSH-206ENST00000587509 SEC24BO95487 1268 aa13.27□□□□□ -0.29
PRKCSH-206ENST00000587509 PSAPP07602 524 aa13.27□□□□□ -0.29
PRKCSH-206ENST00000587509 SFNP31947 248 aa13.27□□□□□ -0.29
PRKCSH-206ENST00000587509 GRIK4Q16099 956 aa13.27□□□□□ -0.29
PRKCSH-206ENST00000587509 CNKSR3Q6P9H4 555 aa13.27□□□□□ -0.29
PRKCSH-206ENST00000587509 NEK8Q86SG6 692 aa13.27□□□□□ -0.29
PRKCSH-206ENST00000587509 PPP1R13LQ8WUF5 828 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms