RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 PTPROQ16827 1216 aa17.25■□□□□ 0.35
VAPA-209ENST00000585042 FAM117BQ6P1L5 589 aa17.25■□□□□ 0.35
VAPA-209ENST00000585042 TAF2Q6P1X5 1199 aa17.25■□□□□ 0.35
VAPA-209ENST00000585042 SEPT1Q8WYJ6 367 aa17.25■□□□□ 0.35
VAPA-209ENST00000585042 NECAB3Q96P71 396 aaPredicted RBP17.25■□□□□ 0.35
VAPA-209ENST00000585042 SIP14410 1827 aa17.25■□□□□ 0.35
VAPA-209ENST00000585042 SH2B2O14492 632 aaPredicted RBP17.24■□□□□ 0.35
VAPA-209ENST00000585042 ARHGAP4P98171 946 aa17.24■□□□□ 0.35
VAPA-209ENST00000585042 NECTIN1Q15223 517 aa17.24■□□□□ 0.35
VAPA-209ENST00000585042 UTP14CQ5TAP6 766 aaKnown RBP17.24■□□□□ 0.35
VAPA-209ENST00000585042 RSPH3Q86UC2 560 aa17.24■□□□□ 0.35
VAPA-209ENST00000585042 LMBR1Q8WVP7 490 aa17.24■□□□□ 0.35
VAPA-209ENST00000585042 MRPL38Q96DV4 380 aaKnown RBP17.24■□□□□ 0.35
VAPA-209ENST00000585042 YME1L1Q96TA2 773 aa17.24■□□□□ 0.35
VAPA-209ENST00000585042 MYL10Q9BUA6 226 aa17.24■□□□□ 0.35
VAPA-209ENST00000585042 LSG1Q9H089 658 aaKnown RBP17.24■□□□□ 0.35
VAPA-209ENST00000585042 ERAP1Q9NZ08 941 aa17.24■□□□□ 0.35
VAPA-209ENST00000585042 MTUS1Q9ULD2 1270 aa17.24■□□□□ 0.35
VAPA-209ENST00000585042 COL4A4P53420 1690 aaPredicted RBP17.23■□□□□ 0.35
VAPA-209ENST00000585042 COL4A6Q14031 1691 aa17.23■□□□□ 0.35
VAPA-209ENST00000585042 KAT6AQ92794 2004 aa17.23■□□□□ 0.35
VAPA-209ENST00000585042 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.23■□□□□ 0.35
VAPA-209ENST00000585042 H3BNC9 293 aa17.23■□□□□ 0.35
VAPA-209ENST00000585042 PLEKHA8P1O95397 391 aa17.23■□□□□ 0.35
VAPA-209ENST00000585042 KCNA2P16389 499 aa17.23■□□□□ 0.35
VAPA-209ENST00000585042 TCF7P36402 384 aaPredicted RBP17.23■□□□□ 0.35
VAPA-209ENST00000585042 EPC2Q52LR7 807 aa17.23■□□□□ 0.35
VAPA-209ENST00000585042 FAM43BQ6ZT52 329 aaPredicted RBP17.23■□□□□ 0.35
VAPA-209ENST00000585042 SGMS1Q86VZ5 419 aa17.23■□□□□ 0.35
VAPA-209ENST00000585042 FANCBQ8NB91 859 aa17.23■□□□□ 0.35
VAPA-209ENST00000585042 TNPO1Q92973 898 aaKnown RBP17.23■□□□□ 0.35
VAPA-209ENST00000585042 C17orf80Q9BSJ5 609 aa17.23■□□□□ 0.35
VAPA-209ENST00000585042 IFIH1Q9BYX4 1025 aaKnown RBP17.23■□□□□ 0.35
VAPA-209ENST00000585042 SMARCAD1Q9H4L7 1026 aa17.23■□□□□ 0.35
VAPA-209ENST00000585042 EHMT1Q9H9B1 1298 aa17.23■□□□□ 0.35
VAPA-209ENST00000585042 UBIAD1Q9Y5Z9 338 aa17.23■□□□□ 0.35
VAPA-209ENST00000585042 SLC12A7Q9Y666 1083 aa17.23■□□□□ 0.35
VAPA-209ENST00000585042 SPDYE3A6NKU9 549 aa17.22■□□□□ 0.35
VAPA-209ENST00000585042 SLC27A2O14975 620 aa17.22■□□□□ 0.35
VAPA-209ENST00000585042 ATP9AO75110 1047 aa17.22■□□□□ 0.35
VAPA-209ENST00000585042 ITGB5P18084 799 aa17.22■□□□□ 0.35
VAPA-209ENST00000585042 PUS10Q3MIT2 529 aaKnown RBP17.22■□□□□ 0.35
VAPA-209ENST00000585042 LEXMQ3ZCV2 418 aa17.22■□□□□ 0.35
VAPA-209ENST00000585042 TRIM50Q86XT4 487 aa17.22■□□□□ 0.35
VAPA-209ENST00000585042 ESYT1Q9BSJ8 1104 aa17.22■□□□□ 0.35
VAPA-209ENST00000585042 UBE2ZQ9H832 354 aaPredicted RBP17.22■□□□□ 0.35
VAPA-209ENST00000585042 JADE2Q9NQC1 790 aa17.22■□□□□ 0.35
VAPA-209ENST00000585042 ARIH1Q9Y4X5 557 aaPredicted RBP17.22■□□□□ 0.35
VAPA-209ENST00000585042 GSTTP1A0A1W2PQM5 241 aa17.21■□□□□ 0.35
VAPA-209ENST00000585042 MBLAC1A4D2B0 266 aaPredicted RBP17.21■□□□□ 0.35
VAPA-209ENST00000585042 RRN3P2A6NIE6 340 aa17.21■□□□□ 0.35
VAPA-209ENST00000585042 CHRNA1P02708 482 aa17.21■□□□□ 0.35
VAPA-209ENST00000585042 CTSHP09668 335 aa17.21■□□□□ 0.35
VAPA-209ENST00000585042 MTMR1Q13613 665 aa17.21■□□□□ 0.35
VAPA-209ENST00000585042 CREB3L3Q68CJ9 461 aa17.21■□□□□ 0.35
VAPA-209ENST00000585042 SYNE3Q6ZMZ3 975 aa17.21■□□□□ 0.35
VAPA-209ENST00000585042 TMEM192Q8IY95 271 aa17.21■□□□□ 0.35
VAPA-209ENST00000585042 IL17RAQ96F46 866 aa17.21■□□□□ 0.35
VAPA-209ENST00000585042 PCDHA6Q9UN73 950 aa17.21■□□□□ 0.35
VAPA-209ENST00000585042 RWDD3Q9Y3V2 267 aa17.21■□□□□ 0.35
VAPA-209ENST00000585042 PCDHA8Q9Y5H6 950 aa17.21■□□□□ 0.35
VAPA-209ENST00000585042 SQORQ9Y6N5 450 aa17.21■□□□□ 0.35
VAPA-209ENST00000585042 DOCK5Q9H7D0 1870 aa17.2■□□□□ 0.34
VAPA-209ENST00000585042 UPP2O95045 317 aa17.2■□□□□ 0.34
VAPA-209ENST00000585042 RB1P06400 928 aa17.2■□□□□ 0.34
VAPA-209ENST00000585042 SP4Q02446 784 aa17.2■□□□□ 0.34
VAPA-209ENST00000585042 PPFIA1Q13136 1202 aa17.2■□□□□ 0.34
VAPA-209ENST00000585042 TIGD5Q53EQ6 642 aa17.2■□□□□ 0.34
VAPA-209ENST00000585042 RNF20Q5VTR2 975 aa17.2■□□□□ 0.34
VAPA-209ENST00000585042 TMTC3Q6ZXV5 915 aa17.2■□□□□ 0.34
VAPA-209ENST00000585042 OSBPL7Q9BZF2 842 aa17.2■□□□□ 0.34
VAPA-209ENST00000585042 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
VAPA-209ENST00000585042 TELO2Q9Y4R8 837 aa17.2■□□□□ 0.34
VAPA-209ENST00000585042 C5orf67F2Z3F1 127 aa17.19■□□□□ 0.34
VAPA-209ENST00000585042 NCK2O43639 380 aa17.19■□□□□ 0.34
VAPA-209ENST00000585042 FOSP01100 380 aaPredicted RBP17.19■□□□□ 0.34
VAPA-209ENST00000585042 MGAT3Q09327 533 aa17.19■□□□□ 0.34
VAPA-209ENST00000585042 GPM6BQ13491 265 aa17.19■□□□□ 0.34
VAPA-209ENST00000585042 GRIK4Q16099 956 aa17.19■□□□□ 0.34
VAPA-209ENST00000585042 CMTR1Q8N1G2 835 aaKnown RBP17.19■□□□□ 0.34
VAPA-209ENST00000585042 FIBCD1Q8N539 461 aa17.19■□□□□ 0.34
VAPA-209ENST00000585042 GLG1Q92896 1179 aa17.19■□□□□ 0.34
VAPA-209ENST00000585042 TUBE1Q9UJT0 475 aa17.19■□□□□ 0.34
VAPA-209ENST00000585042 BRWD1Q9NSI6 2320 aa17.18■□□□□ 0.34
VAPA-209ENST00000585042 hCG_1984214I3L0E3 225 aa17.18■□□□□ 0.34
VAPA-209ENST00000585042 ENPP3O14638 875 aa17.18■□□□□ 0.34
VAPA-209ENST00000585042 COL19A1Q14993 1142 aa17.18■□□□□ 0.34
VAPA-209ENST00000585042 MARCH8Q5T0T0 291 aa17.18■□□□□ 0.34
VAPA-209ENST00000585042 FAM178BQ8IXR5 827 aa17.18■□□□□ 0.34
VAPA-209ENST00000585042 ZNF713Q8N859 430 aaPredicted RBP17.18■□□□□ 0.34
VAPA-209ENST00000585042 BANK1Q8NDB2 785 aa17.18■□□□□ 0.34
VAPA-209ENST00000585042 NEK9Q8TD19 979 aa17.18■□□□□ 0.34
VAPA-209ENST00000585042 MXRA8Q9BRK3 442 aa17.18■□□□□ 0.34
VAPA-209ENST00000585042 LMAN2LQ9H0V9 348 aa17.18■□□□□ 0.34
VAPA-209ENST00000585042 GLT8D2Q9H1C3 349 aa17.18■□□□□ 0.34
VAPA-209ENST00000585042 NFASCO94856 1347 aa17.18■□□□□ 0.34
VAPA-209ENST00000585042 PI4K2BG5E9Z4 385 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 GPR37L1O60883 481 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 RXRAP19793 462 aa17.17■□□□□ 0.34
VAPA-209ENST00000585042 BMPR1AP36894 532 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms