RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 PROB1E7EW31 1015 aa21.07■□□□□ 0.96
TOP3A-220ENST00000585031 MCMDC2Q4G0Z9 681 aa21.07■□□□□ 0.96
TOP3A-220ENST00000585031 FAM26DQ5JW98 314 aa21.07■□□□□ 0.96
TOP3A-220ENST00000585031 STAG2Q8N3U4 1231 aa21.07■□□□□ 0.96
TOP3A-220ENST00000585031 ZNF689Q96CS4 500 aaPredicted RBP21.07■□□□□ 0.96
TOP3A-220ENST00000585031 ADGRA3Q8IWK6 1321 aa21.06■□□□□ 0.96
TOP3A-220ENST00000585031 LOXHD1Q8IVV2 1947 aa21.06■□□□□ 0.96
TOP3A-220ENST00000585031 AVPR2P30518 371 aa21.06■□□□□ 0.96
TOP3A-220ENST00000585031 VCPP55072 806 aaKnown RBP21.06■□□□□ 0.96
TOP3A-220ENST00000585031 NMIQ13287 307 aaPredicted RBP21.06■□□□□ 0.96
TOP3A-220ENST00000585031 TRIM50Q86XT4 487 aa21.06■□□□□ 0.96
TOP3A-220ENST00000585031 EVI5LQ96CN4 794 aa21.06■□□□□ 0.96
TOP3A-220ENST00000585031 ASIC4Q96FT7 647 aa21.06■□□□□ 0.96
TOP3A-220ENST00000585031 PLAGL2Q9UPG8 496 aa21.06■□□□□ 0.96
TOP3A-220ENST00000585031 PLXNA4Q9HCM2 1894 aa21.06■□□□□ 0.96
TOP3A-220ENST00000585031 LAMA4Q16363 1823 aa21.06■□□□□ 0.96
TOP3A-220ENST00000585031 ENPP3O14638 875 aa21.05■□□□□ 0.96
TOP3A-220ENST00000585031 CAND2O75155 1236 aa21.05■□□□□ 0.96
TOP3A-220ENST00000585031 MMP1P03956 469 aa21.05■□□□□ 0.96
TOP3A-220ENST00000585031 RRP1P56182 461 aaKnown RBP21.05■□□□□ 0.96
TOP3A-220ENST00000585031 SIGLEC14Q08ET2 396 aa21.05■□□□□ 0.96
TOP3A-220ENST00000585031 SLC35G1Q2M3R5 365 aa21.05■□□□□ 0.96
TOP3A-220ENST00000585031 RUFY4Q6ZNE9 571 aa21.05■□□□□ 0.96
TOP3A-220ENST00000585031 SMRP1Q8NCR6 262 aa21.05■□□□□ 0.96
TOP3A-220ENST00000585031 ATOH1Q92858 354 aaPredicted RBP21.05■□□□□ 0.96
TOP3A-220ENST00000585031 APBB2Q92870 758 aa21.05■□□□□ 0.96
TOP3A-220ENST00000585031 MLXIPQ9HAP2 919 aa21.05■□□□□ 0.96
TOP3A-220ENST00000585031 RWDD3Q9Y3V2 267 aa21.05■□□□□ 0.96
TOP3A-220ENST00000585031 KDM4AO75164 1064 aa21.04■□□□□ 0.96
TOP3A-220ENST00000585031 GLP2RO95838 553 aa21.04■□□□□ 0.96
TOP3A-220ENST00000585031 GHRP10912 638 aa21.04■□□□□ 0.96
TOP3A-220ENST00000585031 SEMA3FQ13275 785 aa21.04■□□□□ 0.96
TOP3A-220ENST00000585031 KCNV1Q6PIU1 500 aa21.04■□□□□ 0.96
TOP3A-220ENST00000585031 EHMT1Q9H9B1 1298 aa21.04■□□□□ 0.96
TOP3A-220ENST00000585031 PCDHGC5Q9Y5F6 944 aa21.04■□□□□ 0.96
TOP3A-220ENST00000585031 ITGB1P05556 798 aa21.03■□□□□ 0.96
TOP3A-220ENST00000585031 TGFB3P10600 412 aa21.03■□□□□ 0.96
TOP3A-220ENST00000585031 NDUFV1P49821 464 aa21.03■□□□□ 0.96
TOP3A-220ENST00000585031 COASYQ13057 564 aa21.03■□□□□ 0.96
TOP3A-220ENST00000585031 LPIN1Q14693 890 aa21.03■□□□□ 0.96
TOP3A-220ENST00000585031 ASPRV1Q53RT3 343 aa21.03■□□□□ 0.96
TOP3A-220ENST00000585031 ENAHQ8N8S7 591 aaPredicted RBP21.03■□□□□ 0.96
TOP3A-220ENST00000585031 SPPL3Q8TCT6 385 aa21.03■□□□□ 0.96
TOP3A-220ENST00000585031 LMBR1Q8WVP7 490 aa21.03■□□□□ 0.96
TOP3A-220ENST00000585031 LINC01599Q8WXQ3 324 aa21.03■□□□□ 0.96
TOP3A-220ENST00000585031 ESR2Q92731 530 aa21.03■□□□□ 0.96
TOP3A-220ENST00000585031 MTMR8Q96EF0 704 aa21.03■□□□□ 0.96
TOP3A-220ENST00000585031 KAT14Q9H8E8 782 aa21.03■□□□□ 0.96
TOP3A-220ENST00000585031 FAM186AA6NE01 2351 aa21.02■□□□□ 0.96
TOP3A-220ENST00000585031 DHX16O60231 1041 aaKnown RBP21.02■□□□□ 0.96
TOP3A-220ENST00000585031 NUBP1P53384 320 aa21.02■□□□□ 0.96
TOP3A-220ENST00000585031 MRPS9P82933 396 aaKnown RBP21.02■□□□□ 0.96
TOP3A-220ENST00000585031 RBM10P98175 930 aaKnown RBP21.02■□□□□ 0.96
TOP3A-220ENST00000585031 MGAT3Q09327 533 aa21.02■□□□□ 0.96
TOP3A-220ENST00000585031 BTG3Q14201 252 aaPredicted RBP21.02■□□□□ 0.96
TOP3A-220ENST00000585031 CYFIP1Q7L576 1253 aa21.02■□□□□ 0.96
TOP3A-220ENST00000585031 RTN4RL1Q86UN2 441 aaPredicted RBP21.02■□□□□ 0.96
TOP3A-220ENST00000585031 CRIPAKQ8N1N5 446 aa21.02■□□□□ 0.96
TOP3A-220ENST00000585031 GPR20Q99678 358 aa21.02■□□□□ 0.96
TOP3A-220ENST00000585031 PLVAPQ9BX97 442 aa21.02■□□□□ 0.96
TOP3A-220ENST00000585031 AMNQ9BXJ7 453 aa21.02■□□□□ 0.96
TOP3A-220ENST00000585031 MRPL42Q9Y6G3 142 aaKnown RBP21.02■□□□□ 0.96
TOP3A-220ENST00000585031 CCDC171Q6TFL3 1326 aa21.02■□□□□ 0.95
TOP3A-220ENST00000585031 DGKIO75912 1065 aa21.01■□□□□ 0.95
TOP3A-220ENST00000585031 PARP1P09874 1014 aaKnown RBP21.01■□□□□ 0.95
TOP3A-220ENST00000585031 PCP11498 1178 aaKnown RBP21.01■□□□□ 0.95
TOP3A-220ENST00000585031 ARHGAP4P98171 946 aa21.01■□□□□ 0.95
TOP3A-220ENST00000585031 ASCL5Q7RTU5 278 aa21.01■□□□□ 0.95
TOP3A-220ENST00000585031 ERMP1Q7Z2K6 904 aa21.01■□□□□ 0.95
TOP3A-220ENST00000585031 EFHBQ8N7U6 833 aa21.01■□□□□ 0.95
TOP3A-220ENST00000585031 ZSCAN10Q96SZ4 725 aaPredicted RBP21.01■□□□□ 0.95
TOP3A-220ENST00000585031 USP26Q9BXU7 913 aa21.01■□□□□ 0.95
TOP3A-220ENST00000585031 ZSWIM5Q9P217 1185 aa21.01■□□□□ 0.95
TOP3A-220ENST00000585031 BARX2Q9UMQ3 279 aaPredicted RBP21.01■□□□□ 0.95
TOP3A-220ENST00000585031 USP15Q9Y4E8 981 aaPredicted RBP21.01■□□□□ 0.95
TOP3A-220ENST00000585031 MYO10Q9HD67 2058 aa21.01■□□□□ 0.95
TOP3A-220ENST00000585031 B4E1Z4 1266 aa21■□□□□ 0.95
TOP3A-220ENST00000585031 H0Y858 1186 aa21■□□□□ 0.95
TOP3A-220ENST00000585031 CCND2P30279 289 aa21■□□□□ 0.95
TOP3A-220ENST00000585031 PDE1AP54750 535 aa21■□□□□ 0.95
TOP3A-220ENST00000585031 RBM23Q86U06 439 aaKnown RBP21■□□□□ 0.95
TOP3A-220ENST00000585031 FCHSD1Q86WN1 690 aa21■□□□□ 0.95
TOP3A-220ENST00000585031 PHF7Q9BWX1 381 aaPredicted RBP21■□□□□ 0.95
TOP3A-220ENST00000585031 TLR9Q9NR96 1032 aa21■□□□□ 0.95
TOP3A-220ENST00000585031 PCDHA1Q9Y5I3 950 aa21■□□□□ 0.95
TOP3A-220ENST00000585031 PDGFBP01127 241 aaPredicted RBP20.99■□□□□ 0.95
TOP3A-220ENST00000585031 NRIP1P48552 1158 aa20.99■□□□□ 0.95
TOP3A-220ENST00000585031 UTP14CQ5TAP6 766 aaKnown RBP20.99■□□□□ 0.95
TOP3A-220ENST00000585031 P2RX5Q93086 422 aa20.99■□□□□ 0.95
TOP3A-220ENST00000585031 RNF41Q9H4P4 317 aaPredicted RBP20.99■□□□□ 0.95
TOP3A-220ENST00000585031 SPATA31C2B4DYI2 1134 aa20.98■□□□□ 0.95
TOP3A-220ENST00000585031 GNAT1P11488 350 aa20.98■□□□□ 0.95
TOP3A-220ENST00000585031 ICAM3P32942 547 aa20.98■□□□□ 0.95
TOP3A-220ENST00000585031 FBXO47Q5MNV8 452 aa20.98■□□□□ 0.95
TOP3A-220ENST00000585031 METTL7BQ6UX53 244 aa20.98■□□□□ 0.95
TOP3A-220ENST00000585031 KLHL23Q8NBE8 558 aa20.98■□□□□ 0.95
TOP3A-220ENST00000585031 VN1R2Q8NFZ6 395 aa20.98■□□□□ 0.95
TOP3A-220ENST00000585031 ZBTB10Q96DT7 871 aa20.98■□□□□ 0.95
TOP3A-220ENST00000585031 RPGRIP1Q96KN7 1286 aa20.98■□□□□ 0.95
TOP3A-220ENST00000585031 AGO3Q9H9G7 860 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms