RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 FPGSQ05932 587 aa18.47■□□□□ 0.55
ERBB2-222ENST00000584908 NONOQ15233 471 aaKnown RBP eCLIP18.47■□□□□ 0.55
ERBB2-222ENST00000584908 PPP1R13LQ8WUF5 828 aa18.47■□□□□ 0.55
ERBB2-222ENST00000584908 MBOAT7Q96N66 472 aa18.47■□□□□ 0.55
ERBB2-222ENST00000584908 ZNF215Q9UL58 517 aaPredicted RBP18.47■□□□□ 0.55
ERBB2-222ENST00000584908 PITPNM1O00562 1244 aa18.46■□□□□ 0.55
ERBB2-222ENST00000584908 CYP2C9P11712 490 aa18.46■□□□□ 0.55
ERBB2-222ENST00000584908 HMGN5P82970 282 aaKnown RBP18.46■□□□□ 0.55
ERBB2-222ENST00000584908 SP4Q02446 784 aa18.46■□□□□ 0.55
ERBB2-222ENST00000584908 RBL2Q08999 1139 aa18.46■□□□□ 0.55
ERBB2-222ENST00000584908 PTGISQ16647 500 aa18.46■□□□□ 0.55
ERBB2-222ENST00000584908 Q4G0T1 1027 aa18.46■□□□□ 0.55
ERBB2-222ENST00000584908 OXER1Q8TDS5 423 aa18.46■□□□□ 0.55
ERBB2-222ENST00000584908 TNFRSF25Q93038 417 aa18.46■□□□□ 0.55
ERBB2-222ENST00000584908 PPP1R12CQ9BZL4 782 aa18.46■□□□□ 0.55
ERBB2-222ENST00000584908 TBC1D22BQ9NU19 505 aa18.46■□□□□ 0.55
ERBB2-222ENST00000584908 UMODL1Q5DID0 1318 aa18.45■□□□□ 0.54
ERBB2-222ENST00000584908 IGKV6D-21A0A0A0MT36 114 aa18.45■□□□□ 0.54
ERBB2-222ENST00000584908 MMP1P03956 469 aa18.45■□□□□ 0.54
ERBB2-222ENST00000584908 CYP2C18P33260 490 aa18.45■□□□□ 0.54
ERBB2-222ENST00000584908 MCM2P49736 904 aa18.45■□□□□ 0.54
ERBB2-222ENST00000584908 ACTR2P61160 394 aa18.45■□□□□ 0.54
ERBB2-222ENST00000584908 PRR16Q569H4 304 aa18.45■□□□□ 0.54
ERBB2-222ENST00000584908 TRIM50Q86XT4 487 aa18.45■□□□□ 0.54
ERBB2-222ENST00000584908 TMEM199Q8N511 208 aa18.45■□□□□ 0.54
ERBB2-222ENST00000584908 PCYT2Q99447 389 aa18.45■□□□□ 0.54
ERBB2-222ENST00000584908 ZNF577Q9BSK1 485 aa18.45■□□□□ 0.54
ERBB2-222ENST00000584908 WNT8AQ9H1J5 351 aa18.45■□□□□ 0.54
ERBB2-222ENST00000584908 SMARCAD1Q9H4L7 1026 aa18.45■□□□□ 0.54
ERBB2-222ENST00000584908 MYH9P35579 1960 aaKnown RBP18.44■□□□□ 0.54
ERBB2-222ENST00000584908 CCDC194A0A1B0GVG4 234 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 MSH4O15457 936 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 CD2BP2O95400 341 aaKnown RBP18.44■□□□□ 0.54
ERBB2-222ENST00000584908 CCNE2O96020 404 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 SMIM10L2AP0DMW4 78 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 SMIM10L2BP0DMW5 78 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 KRT2P35908 639 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 EPHB4P54760 987 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 CHMP4BP1P59074 171 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 ADAM17P78536 824 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 PPIGQ13427 754 aaKnown RBP eCLIP18.44■□□□□ 0.543e-9■□□□□ 10.1
ERBB2-222ENST00000584908 HIC1Q14526 733 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 INF2Q27J81 1249 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 LRIT3Q3SXY7 679 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 UTP14CQ5TAP6 766 aaKnown RBP18.44■□□□□ 0.54
ERBB2-222ENST00000584908 KRT40Q6A162 431 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 CAGE1Q8TC20 777 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 BRMS1Q9HCU9 246 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 ERAP1Q9NZ08 941 aa18.44■□□□□ 0.54
ERBB2-222ENST00000584908 SCN5AQ14524 2016 aa18.43■□□□□ 0.54
ERBB2-222ENST00000584908 CSF2RAP15509 400 aa18.43■□□□□ 0.54
ERBB2-222ENST00000584908 PTK7Q13308 1070 aa18.43■□□□□ 0.54
ERBB2-222ENST00000584908 BFSP2Q13515 415 aa18.43■□□□□ 0.54
ERBB2-222ENST00000584908 PPP4R3AQ6IN85 833 aa18.43■□□□□ 0.54
ERBB2-222ENST00000584908 ZNF746Q6NUN9 644 aaPredicted RBP18.43■□□□□ 0.54
ERBB2-222ENST00000584908 ABHD15Q6UXT9 468 aa18.43■□□□□ 0.54
ERBB2-222ENST00000584908 PLPPR4Q7Z2D5 763 aa18.43■□□□□ 0.54
ERBB2-222ENST00000584908 NEK8Q86SG6 692 aa18.43■□□□□ 0.54
ERBB2-222ENST00000584908 SERINC5Q86VE9 423 aa18.43■□□□□ 0.54
ERBB2-222ENST00000584908 DHX38Q92620 1227 aaKnown RBP18.43■□□□□ 0.54
ERBB2-222ENST00000584908 SLC5A5Q92911 643 aa18.43■□□□□ 0.54
ERBB2-222ENST00000584908 RIT2Q99578 217 aa18.43■□□□□ 0.54
ERBB2-222ENST00000584908 RNPEPQ9H4A4 650 aa18.43■□□□□ 0.54
ERBB2-222ENST00000584908 NOD1Q9Y239 953 aa18.43■□□□□ 0.54
ERBB2-222ENST00000584908 C17orf102A2RUQ5 167 aa18.42■□□□□ 0.54
ERBB2-222ENST00000584908 TDP2O95551 362 aa18.42■□□□□ 0.54
ERBB2-222ENST00000584908 GCFC2P16383 781 aaKnown RBP18.42■□□□□ 0.54
ERBB2-222ENST00000584908 FXR1P51114 621 aaKnown RBP eCLIP18.42■□□□□ 0.54
ERBB2-222ENST00000584908 KRT76Q01546 638 aa18.42■□□□□ 0.54
ERBB2-222ENST00000584908 NR5A1Q13285 461 aa18.42■□□□□ 0.54
ERBB2-222ENST00000584908 TRIM29Q14134 588 aa18.42■□□□□ 0.54
ERBB2-222ENST00000584908 TRIM71Q2Q1W2 868 aaKnown RBP18.42■□□□□ 0.54
ERBB2-222ENST00000584908 EARS2Q5JPH6 523 aaKnown RBP18.42■□□□□ 0.54
ERBB2-222ENST00000584908 C16orf59Q7L2K0 433 aa18.42■□□□□ 0.54
ERBB2-222ENST00000584908 SMAP1Q8IYB5 467 aaPredicted RBP18.42■□□□□ 0.54
ERBB2-222ENST00000584908 CCDC155Q8N6L0 562 aa18.42■□□□□ 0.54
ERBB2-222ENST00000584908 AFAP1L1Q8TED9 768 aa18.42■□□□□ 0.54
ERBB2-222ENST00000584908 VWCEQ96DN2 955 aa18.42■□□□□ 0.54
ERBB2-222ENST00000584908 TMX3Q96JJ7 454 aa18.42■□□□□ 0.54
ERBB2-222ENST00000584908 NRCAMQ92823 1304 aa18.42■□□□□ 0.54
ERBB2-222ENST00000584908 GNAT1P11488 350 aa18.41■□□□□ 0.54
ERBB2-222ENST00000584908 SLC26A2P50443 739 aa18.41■□□□□ 0.54
ERBB2-222ENST00000584908 ZNF200P98182 395 aaPredicted RBP18.41■□□□□ 0.54
ERBB2-222ENST00000584908 SHHQ15465 462 aa18.41■□□□□ 0.54
ERBB2-222ENST00000584908 C9orf50Q5SZB4 431 aa18.41■□□□□ 0.54
ERBB2-222ENST00000584908 PIK3AP1Q6ZUJ8 805 aa18.41■□□□□ 0.54
ERBB2-222ENST00000584908 DIS3L2Q8IYB7 885 aaKnown RBP18.41■□□□□ 0.54
ERBB2-222ENST00000584908 ETNPPLQ8TBG4 499 aa18.41■□□□□ 0.54
ERBB2-222ENST00000584908 GLG1Q92896 1179 aa18.41■□□□□ 0.54
ERBB2-222ENST00000584908 NAP1L4Q99733 375 aaKnown RBP18.41■□□□□ 0.54
ERBB2-222ENST00000584908 AZI2Q9H6S1 392 aa18.41■□□□□ 0.54
ERBB2-222ENST00000584908 IL23AQ9NPF7 189 aa18.41■□□□□ 0.54
ERBB2-222ENST00000584908 BTBD18B2RXH4 712 aa18.4■□□□□ 0.54
ERBB2-222ENST00000584908 PSMD10O75832 226 aa18.4■□□□□ 0.54
ERBB2-222ENST00000584908 IQCF3P0C7M6 154 aa18.4■□□□□ 0.54
ERBB2-222ENST00000584908 RFC2P35250 354 aa18.4■□□□□ 0.54
ERBB2-222ENST00000584908 STAT5BP51692 787 aa18.4■□□□□ 0.54
ERBB2-222ENST00000584908 CCL23P55773 120 aa18.4■□□□□ 0.54
ERBB2-222ENST00000584908 TMEM240Q5SV17 173 aa18.4■□□□□ 0.54
ERBB2-222ENST00000584908 B3GNT9Q6UX72 402 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms