RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 NFASCO94856 1347 aa28.28■■■□□ 2.12
TTC39C-209ENST00000584250 CCNE2O96020 404 aa28.28■■■□□ 2.12
TTC39C-209ENST00000584250 SUPT20HL2P0C7V6 817 aa28.28■■■□□ 2.12
TTC39C-209ENST00000584250 ACRP10323 421 aa28.28■■■□□ 2.12
TTC39C-209ENST00000584250 RABEP1Q15276 862 aa28.28■■■□□ 2.12
TTC39C-209ENST00000584250 PRR16Q569H4 304 aa28.28■■■□□ 2.12
TTC39C-209ENST00000584250 SEPT1Q8WYJ6 367 aa28.28■■■□□ 2.12
TTC39C-209ENST00000584250 WNT8BQ93098 351 aa28.28■■■□□ 2.12
TTC39C-209ENST00000584250 SCN5AQ14524 2016 aa28.27■■■□□ 2.12
TTC39C-209ENST00000584250 EARS2Q5JPH6 523 aaKnown RBP28.27■■■□□ 2.12
TTC39C-209ENST00000584250 LRCH3Q96II8 777 aa28.27■■■□□ 2.12
TTC39C-209ENST00000584250 RNPEPQ9H4A4 650 aa28.27■■■□□ 2.12
TTC39C-209ENST00000584250 UPF2Q9HAU5 1272 aaKnown RBP28.27■■■□□ 2.12
TTC39C-209ENST00000584250 LAMA3Q16787 3333 aa28.26■■■□□ 2.12
TTC39C-209ENST00000584250 FAM205CA6NFA0 338 aa28.26■■■□□ 2.11
TTC39C-209ENST00000584250 TDP2O95551 362 aa28.26■■■□□ 2.11
TTC39C-209ENST00000584250 SMIM10L2AP0DMW4 78 aa28.26■■■□□ 2.11
TTC39C-209ENST00000584250 SMIM10L2BP0DMW5 78 aa28.26■■■□□ 2.11
TTC39C-209ENST00000584250 ACTR2P61160 394 aa28.26■■■□□ 2.11
TTC39C-209ENST00000584250 INF2Q27J81 1249 aa28.26■■■□□ 2.11
TTC39C-209ENST00000584250 GALNT17Q6IS24 598 aa28.26■■■□□ 2.11
TTC39C-209ENST00000584250 FAM177A1Q8N128 213 aaPredicted RBP28.26■■■□□ 2.11
TTC39C-209ENST00000584250 GJA10Q969M2 543 aa28.26■■■□□ 2.11
TTC39C-209ENST00000584250 SDF4Q9BRK5 362 aa28.26■■■□□ 2.11
TTC39C-209ENST00000584250 BACH2Q9BYV9 841 aa28.26■■■□□ 2.11
TTC39C-209ENST00000584250 NOD1Q9Y239 953 aa28.26■■■□□ 2.11
TTC39C-209ENST00000584250 IPO5O00410 1097 aaKnown RBP28.25■■■□□ 2.11
TTC39C-209ENST00000584250 MARK3P27448 753 aa28.25■■■□□ 2.11
TTC39C-209ENST00000584250 NR5A1Q13285 461 aa28.25■■■□□ 2.11
TTC39C-209ENST00000584250 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.25■■■□□ 2.11
TTC39C-209ENST00000584250 HOXC8P31273 242 aa28.24■■■□□ 2.11
TTC39C-209ENST00000584250 USP11P51784 963 aa28.24■■■□□ 2.11
TTC39C-209ENST00000584250 TMEM199Q8N511 208 aa28.24■■■□□ 2.11
TTC39C-209ENST00000584250 WASF1Q92558 559 aa28.24■■■□□ 2.11
TTC39C-209ENST00000584250 ZSCAN31Q96LW9 406 aaPredicted RBP28.24■■■□□ 2.11
TTC39C-209ENST00000584250 ZNF577Q9BSK1 485 aa28.24■■■□□ 2.11
TTC39C-209ENST00000584250 SETD4Q9NVD3 440 aa28.24■■■□□ 2.11
TTC39C-209ENST00000584250 LGR5O75473 907 aa28.23■■■□□ 2.11
TTC39C-209ENST00000584250 NONOQ15233 471 aaKnown RBP eCLIP28.23■■■□□ 2.11
TTC39C-209ENST00000584250 KRT25Q7Z3Z0 450 aa28.23■■■□□ 2.11
TTC39C-209ENST00000584250 MSH4O15457 936 aa28.22■■■□□ 2.11
TTC39C-209ENST00000584250 TREHO43280 583 aa28.22■■■□□ 2.11
TTC39C-209ENST00000584250 XBP1P17861 261 aa28.22■■■□□ 2.11
TTC39C-209ENST00000584250 SETQ01105 290 aaPredicted RBP28.22■■■□□ 2.11
TTC39C-209ENST00000584250 PPIGQ13427 754 aaKnown RBP eCLIP28.22■■■□□ 2.11
TTC39C-209ENST00000584250 TRIM71Q2Q1W2 868 aaKnown RBP28.22■■■□□ 2.11
TTC39C-209ENST00000584250 TMEM240Q5SV17 173 aa28.22■■■□□ 2.11
TTC39C-209ENST00000584250 KRT40Q6A162 431 aa28.22■■■□□ 2.11
TTC39C-209ENST00000584250 GLG1Q92896 1179 aa28.22■■■□□ 2.11
TTC39C-209ENST00000584250 TNFRSF25Q93038 417 aa28.22■■■□□ 2.11
TTC39C-209ENST00000584250 ZNF215Q9UL58 517 aaPredicted RBP28.22■■■□□ 2.11
TTC39C-209ENST00000584250 C17orf102A2RUQ5 167 aa28.21■■■□□ 2.11
TTC39C-209ENST00000584250 ATG7O95352 703 aa28.21■■■□□ 2.11
TTC39C-209ENST00000584250 GUCY1B3Q02153 619 aa28.21■■■□□ 2.11
TTC39C-209ENST00000584250 LRIT3Q3SXY7 679 aa28.21■■■□□ 2.11
TTC39C-209ENST00000584250 PIK3AP1Q6ZUJ8 805 aa28.21■■■□□ 2.11
TTC39C-209ENST00000584250 ZNF365Q70YC5 407 aa28.21■■■□□ 2.11
TTC39C-209ENST00000584250 IL23AQ9NPF7 189 aa28.21■■■□□ 2.11
TTC39C-209ENST00000584250 SH2B1Q9NRF2 756 aaPredicted RBP28.21■■■□□ 2.11
TTC39C-209ENST00000584250 TANC1Q9C0D5 1861 aa28.21■■■□□ 2.11
TTC39C-209ENST00000584250 TET1Q8NFU7 2136 aa28.21■■■□□ 2.11
TTC39C-209ENST00000584250 EMSYQ7Z589 1322 aa28.2■■■□□ 2.11
TTC39C-209ENST00000584250 CCDC194A0A1B0GVG4 234 aa28.2■■■□□ 2.1
TTC39C-209ENST00000584250 ABHD15Q6UXT9 468 aa28.2■■■□□ 2.1
TTC39C-209ENST00000584250 LMBR1Q8WVP7 490 aa28.2■■■□□ 2.1
TTC39C-209ENST00000584250 ATP6V0A1Q93050 837 aa28.2■■■□□ 2.1
TTC39C-209ENST00000584250 MBOAT7Q96N66 472 aa28.2■■■□□ 2.1
TTC39C-209ENST00000584250 SMARCAD1Q9H4L7 1026 aa28.2■■■□□ 2.1
TTC39C-209ENST00000584250 CYP3A7-CYP3A51PA0A087WV96 503 aa28.19■■■□□ 2.1
TTC39C-209ENST00000584250 BTBD18B2RXH4 712 aa28.19■■■□□ 2.1
TTC39C-209ENST00000584250 PITPNM1O00562 1244 aa28.19■■■□□ 2.1
TTC39C-209ENST00000584250 SLC37A4O43826 429 aa28.19■■■□□ 2.1
TTC39C-209ENST00000584250 MMP1P03956 469 aa28.19■■■□□ 2.1
TTC39C-209ENST00000584250 IQCF3P0C7M6 154 aa28.19■■■□□ 2.1
TTC39C-209ENST00000584250 CYP3A7P24462 503 aa28.19■■■□□ 2.1
TTC39C-209ENST00000584250 ADAM17P78536 824 aa28.19■■■□□ 2.1
TTC39C-209ENST00000584250 PTK7Q13308 1070 aa28.19■■■□□ 2.1
TTC39C-209ENST00000584250 GPNMBQ14956 572 aa28.19■■■□□ 2.1
TTC39C-209ENST00000584250 DEFB128Q7Z7B8 93 aa28.19■■■□□ 2.1
TTC39C-209ENST00000584250 SERINC5Q86VE9 423 aa28.19■■■□□ 2.1
TTC39C-209ENST00000584250 ZBTB10Q96DT7 871 aa28.19■■■□□ 2.1
TTC39C-209ENST00000584250 RNPC3Q96LT9 517 aaKnown RBP28.19■■■□□ 2.1
TTC39C-209ENST00000584250 LLPHQ9BRT6 129 aaKnown RBP28.19■■■□□ 2.1
TTC39C-209ENST00000584250 IGKV6D-21A0A0A0MT36 114 aa28.18■■■□□ 2.1
TTC39C-209ENST00000584250 CKBP12277 381 aa28.18■■■□□ 2.1
TTC39C-209ENST00000584250 KRT2P35908 639 aa28.18■■■□□ 2.1
TTC39C-209ENST00000584250 BFSP2Q13515 415 aa28.18■■■□□ 2.1
TTC39C-209ENST00000584250 LETM2Q2VYF4 491 aa28.18■■■□□ 2.1
TTC39C-209ENST00000584250 Q4G0T1 1027 aa28.18■■■□□ 2.1
TTC39C-209ENST00000584250 TRAF7Q6Q0C0 670 aa28.18■■■□□ 2.1
TTC39C-209ENST00000584250 CCDC60Q8IWA6 550 aaPredicted RBP28.18■■■□□ 2.1
TTC39C-209ENST00000584250 SLC5A5Q92911 643 aa28.18■■■□□ 2.1
TTC39C-209ENST00000584250 ERAP1Q9NZ08 941 aa28.18■■■□□ 2.1
TTC39C-209ENST00000584250 KAT6AQ92794 2004 aa28.18■■■□□ 2.1
TTC39C-209ENST00000584250 ST18O60284 1047 aa28.17■■■□□ 2.1
TTC39C-209ENST00000584250 PLCB4Q15147 1175 aa28.17■■■□□ 2.1
TTC39C-209ENST00000584250 DIS3L2Q8IYB7 885 aaKnown RBP28.17■■■□□ 2.1
TTC39C-209ENST00000584250 RETREG2Q8NC44 543 aa28.17■■■□□ 2.1
TTC39C-209ENST00000584250 TMX3Q96JJ7 454 aa28.17■■■□□ 2.1
TTC39C-209ENST00000584250 TBC1D22BQ9NU19 505 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms