RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 GJD3Q8N144 294 aa15.54■□□□□ 0.08
CCDC57-218ENST00000583593 BANK1Q8NDB2 785 aa15.54■□□□□ 0.08
CCDC57-218ENST00000583593 MYL10Q9BUA6 226 aa15.54■□□□□ 0.08
CCDC57-218ENST00000583593 EHMT1Q9H9B1 1298 aa15.54■□□□□ 0.08
CCDC57-218ENST00000583593 H3BQ06 376 aaPredicted RBP15.53■□□□□ 0.08
CCDC57-218ENST00000583593 ARHGAP4P98171 946 aa15.53■□□□□ 0.08
CCDC57-218ENST00000583593 SP4Q02446 784 aa15.53■□□□□ 0.08
CCDC57-218ENST00000583593 MGAT3Q09327 533 aa15.53■□□□□ 0.08
CCDC57-218ENST00000583593 COL9A3Q14050 684 aaPredicted RBP15.53■□□□□ 0.08
CCDC57-218ENST00000583593 PTPROQ16827 1216 aa15.53■□□□□ 0.08
CCDC57-218ENST00000583593 TCEAL5Q5H9L2 206 aa15.53■□□□□ 0.08
CCDC57-218ENST00000583593 CATIPQ7Z7H3 387 aa15.53■□□□□ 0.08
CCDC57-218ENST00000583593 RALYLQ86SE5 291 aaKnown RBP15.53■□□□□ 0.08
CCDC57-218ENST00000583593 APBB2Q92870 758 aa15.53■□□□□ 0.08
CCDC57-218ENST00000583593 PABPC5Q96DU9 382 aaKnown RBP15.53■□□□□ 0.08
CCDC57-218ENST00000583593 MAP3K14Q99558 947 aa15.53■□□□□ 0.08
CCDC57-218ENST00000583593 SPZ1Q9BXG8 430 aa15.53■□□□□ 0.08
CCDC57-218ENST00000583593 IFIH1Q9BYX4 1025 aaKnown RBP15.53■□□□□ 0.08
CCDC57-218ENST00000583593 LY9Q9HBG7 655 aa15.53■□□□□ 0.08
CCDC57-218ENST00000583593 ZNF215Q9UL58 517 aaPredicted RBP15.53■□□□□ 0.08
CCDC57-218ENST00000583593 HCN4Q9Y3Q4 1203 aa15.53■□□□□ 0.08
CCDC57-218ENST00000583593 MYO7AQ13402 2215 aa15.52■□□□□ 0.08
CCDC57-218ENST00000583593 NRCAMQ92823 1304 aa15.52■□□□□ 0.08
CCDC57-218ENST00000583593 GSTTP1A0A1W2PQM5 241 aa15.52■□□□□ 0.08
CCDC57-218ENST00000583593 SGSM2O43147 1006 aa15.52■□□□□ 0.08
CCDC57-218ENST00000583593 KCNA2P16389 499 aa15.52■□□□□ 0.08
CCDC57-218ENST00000583593 SART3Q15020 963 aaKnown RBP15.52■□□□□ 0.08
CCDC57-218ENST00000583593 TIGD5Q53EQ6 642 aa15.52■□□□□ 0.08
CCDC57-218ENST00000583593 XRRA1Q6P2D8 792 aa15.52■□□□□ 0.08
CCDC57-218ENST00000583593 RPAINQ86UA6 219 aa15.52■□□□□ 0.08
CCDC57-218ENST00000583593 ZNF654Q8IZM8 581 aa15.52■□□□□ 0.08
CCDC57-218ENST00000583593 SMARCC2Q8TAQ2 1214 aa15.52■□□□□ 0.08
CCDC57-218ENST00000583593 RUFY2Q8WXA3 655 aa15.52■□□□□ 0.08
CCDC57-218ENST00000583593 MAP4K1Q92918 833 aa15.52■□□□□ 0.08
CCDC57-218ENST00000583593 RC3H2Q9HBD1 1191 aaKnown RBP15.52■□□□□ 0.08
CCDC57-218ENST00000583593 C5orf67F2Z3F1 127 aa15.51■□□□□ 0.07
CCDC57-218ENST00000583593 PLEKHA8P1O95397 391 aa15.51■□□□□ 0.07
CCDC57-218ENST00000583593 GHRP10912 638 aa15.51■□□□□ 0.07
CCDC57-218ENST00000583593 ITGB5P18084 799 aa15.51■□□□□ 0.07
CCDC57-218ENST00000583593 SMARCA1P28370 1054 aa15.51■□□□□ 0.07
CCDC57-218ENST00000583593 TCF7P36402 384 aaPredicted RBP15.51■□□□□ 0.07
CCDC57-218ENST00000583593 LTBRP36941 435 aa15.51■□□□□ 0.07
CCDC57-218ENST00000583593 LPIN1Q14693 890 aa15.51■□□□□ 0.07
CCDC57-218ENST00000583593 CMTR1Q8N1G2 835 aaKnown RBP15.51■□□□□ 0.07
CCDC57-218ENST00000583593 SRBD1Q8N5C6 995 aaKnown RBP15.51■□□□□ 0.07
CCDC57-218ENST00000583593 RRP36Q96EU6 259 aaKnown RBP15.51■□□□□ 0.07
CCDC57-218ENST00000583593 IL17RAQ96F46 866 aa15.51■□□□□ 0.07
CCDC57-218ENST00000583593 NSUN3Q9H649 340 aaKnown RBP15.51■□□□□ 0.07
CCDC57-218ENST00000583593 WDFY4Q6ZS81 3184 aa15.5■□□□□ 0.07
CCDC57-218ENST00000583593 TRIOO75962 3097 aa15.5■□□□□ 0.07
CCDC57-218ENST00000583593 TTC3P53804 2025 aa15.5■□□□□ 0.07
CCDC57-218ENST00000583593 POTEB3A0JP26 581 aa15.5■□□□□ 0.07
CCDC57-218ENST00000583593 DDAH1O94760 285 aa15.5■□□□□ 0.07
CCDC57-218ENST00000583593 PUS10Q3MIT2 529 aaKnown RBP15.5■□□□□ 0.07
CCDC57-218ENST00000583593 MARCH8Q5T0T0 291 aa15.5■□□□□ 0.07
CCDC57-218ENST00000583593 POTEBQ6S5H4 581 aa15.5■□□□□ 0.07
CCDC57-218ENST00000583593 NLRX1Q86UT6 975 aa15.5■□□□□ 0.07
CCDC57-218ENST00000583593 CUL5Q93034 780 aa15.5■□□□□ 0.07
CCDC57-218ENST00000583593 ZNF689Q96CS4 500 aaPredicted RBP15.5■□□□□ 0.07
CCDC57-218ENST00000583593 GPRASP2Q96D09 838 aa15.5■□□□□ 0.07
CCDC57-218ENST00000583593 YTHDC1Q96MU7 727 aaKnown RBP15.5■□□□□ 0.07
CCDC57-218ENST00000583593 RBM8AQ9Y5S9 174 aaKnown RBP15.5■□□□□ 0.07
CCDC57-218ENST00000583593 MBLAC1A4D2B0 266 aaPredicted RBP15.49■□□□□ 0.07
CCDC57-218ENST00000583593 PRR33A8MZF0 331 aa15.49■□□□□ 0.07
CCDC57-218ENST00000583593 ENPP3O14638 875 aa15.49■□□□□ 0.07
CCDC57-218ENST00000583593 GRM6O15303 877 aa15.49■□□□□ 0.07
CCDC57-218ENST00000583593 SSTR3P32745 418 aaPredicted RBP15.49■□□□□ 0.07
CCDC57-218ENST00000583593 BMPR1AP36894 532 aa15.49■□□□□ 0.07
CCDC57-218ENST00000583593 GRIK4Q16099 956 aa15.49■□□□□ 0.07
CCDC57-218ENST00000583593 CTC1Q2NKJ3 1217 aa15.49■□□□□ 0.07
CCDC57-218ENST00000583593 FBXO47Q5MNV8 452 aa15.49■□□□□ 0.07
CCDC57-218ENST00000583593 TAF2Q6P1X5 1199 aa15.49■□□□□ 0.07
CCDC57-218ENST00000583593 FIBCD1Q8N539 461 aa15.49■□□□□ 0.07
CCDC57-218ENST00000583593 GIMAP8Q8ND71 665 aaPredicted RBP15.49■□□□□ 0.07
CCDC57-218ENST00000583593 CTCFLQ8NI51 663 aaPredicted RBP15.49■□□□□ 0.07
CCDC57-218ENST00000583593 DNAJB3Q8WWF6 145 aa15.49■□□□□ 0.07
CCDC57-218ENST00000583593 LINC01599Q8WXQ3 324 aa15.49■□□□□ 0.07
CCDC57-218ENST00000583593 SEPT1Q8WYJ6 367 aa15.49■□□□□ 0.07
CCDC57-218ENST00000583593 ZBTB10Q96DT7 871 aa15.49■□□□□ 0.07
CCDC57-218ENST00000583593 UBIAD1Q9Y5Z9 338 aa15.49■□□□□ 0.07
CCDC57-218ENST00000583593 ADGRA3Q8IWK6 1321 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 C19orf67A6NJJ6 358 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 RB1P06400 928 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 RXRAP19793 462 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 MARK3P27448 753 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 KIF5BP33176 963 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 CTNNB1P35222 781 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 ZP2Q05996 745 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 DLX2Q07687 328 aaPredicted RBP15.48■□□□□ 0.07
CCDC57-218ENST00000583593 PPFIA1Q13136 1202 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 UBE2SQ16763 222 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 RTN4RL1Q86UN2 441 aaPredicted RBP15.48■□□□□ 0.07
CCDC57-218ENST00000583593 CRIPAKQ8N1N5 446 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 CLP1Q92989 425 aaKnown RBP15.48■□□□□ 0.07
CCDC57-218ENST00000583593 PCYT2Q99447 389 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 LZTS2Q9BRK4 669 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 PSTPIP2Q9H939 334 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 AGO3Q9H9G7 860 aaKnown RBP15.48■□□□□ 0.07
CCDC57-218ENST00000583593 CLDND1Q9NY35 253 aa15.48■□□□□ 0.07
CCDC57-218ENST00000583593 TUBE1Q9UJT0 475 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms