RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 SPZ1Q9BXG8 430 aa20.43■□□□□ 0.86
SNX11-212ENST00000583320 GRXCR2A6NFK2 248 aa20.42■□□□□ 0.86
SNX11-212ENST00000583320 DTNBO60941 627 aa20.42■□□□□ 0.86
SNX11-212ENST00000583320 CXCL10P02778 98 aa20.42■□□□□ 0.86
SNX11-212ENST00000583320 SELPP16109 830 aa20.42■□□□□ 0.86
SNX11-212ENST00000583320 EDNRBP24530 442 aa20.42■□□□□ 0.86
SNX11-212ENST00000583320 CCDC96Q2M329 555 aa20.42■□□□□ 0.86
SNX11-212ENST00000583320 BRDTQ58F21 947 aaPredicted RBP20.42■□□□□ 0.86
SNX11-212ENST00000583320 CNKSR3Q6P9H4 555 aa20.42■□□□□ 0.86
SNX11-212ENST00000583320 FAM177A1Q8N128 213 aaPredicted RBP20.42■□□□□ 0.86
SNX11-212ENST00000583320 CAGE1Q8TC20 777 aa20.42■□□□□ 0.86
SNX11-212ENST00000583320 KAT2BQ92831 832 aa20.42■□□□□ 0.86
SNX11-212ENST00000583320 C17orf80Q9BSJ5 609 aa20.42■□□□□ 0.86
SNX11-212ENST00000583320 LOC102724159A0A0B4J2E5 919 aa20.41■□□□□ 0.86
SNX11-212ENST00000583320 KLRF2D3W0D1 207 aa20.41■□□□□ 0.86
SNX11-212ENST00000583320 H3BQ06 376 aaPredicted RBP20.41■□□□□ 0.86
SNX11-212ENST00000583320 ZNF543Q08ER8 600 aa20.41■□□□□ 0.86
SNX11-212ENST00000583320 PWP2Q15269 919 aaKnown RBP20.41■□□□□ 0.86
SNX11-212ENST00000583320 STAG2Q8N3U4 1231 aa20.41■□□□□ 0.86
SNX11-212ENST00000583320 SCFD2Q8WU76 684 aa20.41■□□□□ 0.86
SNX11-212ENST00000583320 ZSCAN16Q9H4T2 348 aaPredicted RBP20.41■□□□□ 0.86
SNX11-212ENST00000583320 NKRFO15226 690 aaKnown RBP eCLIP20.4■□□□□ 0.86
SNX11-212ENST00000583320 KPNA6O60684 536 aa20.4■□□□□ 0.86
SNX11-212ENST00000583320 TXNP10599 105 aaKnown RBP20.4■□□□□ 0.86
SNX11-212ENST00000583320 ALADP13716 330 aa20.4■□□□□ 0.86
SNX11-212ENST00000583320 PDE4DQ08499 809 aa20.4■□□□□ 0.86
SNX11-212ENST00000583320 TRAF7Q6Q0C0 670 aa20.4■□□□□ 0.86
SNX11-212ENST00000583320 CCDC155Q8N6L0 562 aa20.4■□□□□ 0.86
SNX11-212ENST00000583320 NEK9Q8TD19 979 aa20.4■□□□□ 0.86
SNX11-212ENST00000583320 WNT8BQ93098 351 aa20.4■□□□□ 0.86
SNX11-212ENST00000583320 USP34Q70CQ2 3546 aa20.4■□□□□ 0.86
SNX11-212ENST00000583320 FRMPD2Q68DX3 1309 aaPredicted RBP20.39■□□□□ 0.85
SNX11-212ENST00000583320 POTEB3A0JP26 581 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 DCXO43602 365 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 BAG4O95429 457 aaKnown RBP20.39■□□□□ 0.85
SNX11-212ENST00000583320 CKBP12277 381 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 XBP1P17861 261 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 RPS6P62753 249 aaKnown RBP20.39■□□□□ 0.85
SNX11-212ENST00000583320 RBL2Q08999 1139 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 TRIM29Q14134 588 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 MBTPS1Q14703 1052 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 PKN1Q16512 942 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 CSPP1Q1MSJ5 1256 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 SYDE2Q5VT97 1194 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 POTEBQ6S5H4 581 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 BTNL9Q6UXG8 535 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 SESTD1Q86VW0 696 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 CMTR1Q8N1G2 835 aaKnown RBP20.39■□□□□ 0.85
SNX11-212ENST00000583320 AFG1LQ8WV93 481 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 SNX27Q96L92 541 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 RIOX1Q9H6W3 641 aa20.39■□□□□ 0.85
SNX11-212ENST00000583320 V9GY48 417 aaPredicted RBP20.39■□□□□ 0.85
SNX11-212ENST00000583320 PPFIA3O75145 1194 aa20.38■□□□□ 0.85
SNX11-212ENST00000583320 MMP3P08254 477 aa20.38■□□□□ 0.85
SNX11-212ENST00000583320 RESTQ13127 1097 aa20.38■□□□□ 0.85
SNX11-212ENST00000583320 PFKFB3Q16875 520 aaPredicted RBP20.38■□□□□ 0.85
SNX11-212ENST00000583320 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.38■□□□□ 0.85
SNX11-212ENST00000583320 RNF207Q6ZRF8 634 aa20.38■□□□□ 0.85
SNX11-212ENST00000583320 CCDC82Q8N4S0 544 aa20.38■□□□□ 0.85
SNX11-212ENST00000583320 FBXO22Q8NEZ5 403 aa20.38■□□□□ 0.85
SNX11-212ENST00000583320 MYO7AQ13402 2215 aa20.37■□□□□ 0.85
SNX11-212ENST00000583320 BAZ2BQ9UIF8 2168 aaKnown RBP20.37■□□□□ 0.85
SNX11-212ENST00000583320 ABHD14A-ACY1A0A1B0GW23 586 aa20.37■□□□□ 0.85
SNX11-212ENST00000583320 ZP2Q05996 745 aa20.37■□□□□ 0.85
SNX11-212ENST00000583320 ARHGAP1Q07960 439 aa20.37■□□□□ 0.85
SNX11-212ENST00000583320 NFKBIBQ15653 356 aa20.37■□□□□ 0.85
SNX11-212ENST00000583320 TRIM71Q2Q1W2 868 aaKnown RBP20.37■□□□□ 0.85
SNX11-212ENST00000583320 CCDC62Q6P9F0 684 aa20.37■□□□□ 0.85
SNX11-212ENST00000583320 PHOX2BQ99453 314 aa20.37■□□□□ 0.85
SNX11-212ENST00000583320 GPCPD1Q9NPB8 672 aa20.37■□□□□ 0.85
SNX11-212ENST00000583320 SH3GLB2Q9NR46 395 aa20.37■□□□□ 0.85
SNX11-212ENST00000583320 ATG2AQ2TAZ0 1938 aa20.37■□□□□ 0.85
SNX11-212ENST00000583320 MICAL3Q7RTP6 2002 aa20.36■□□□□ 0.85
SNX11-212ENST00000583320 CYTH3O43739 400 aa20.36■□□□□ 0.85
SNX11-212ENST00000583320 GOLGA8HP0CJ92 632 aa20.36■□□□□ 0.85
SNX11-212ENST00000583320 SCG2P13521 617 aa20.36■□□□□ 0.85
SNX11-212ENST00000583320 PTMSP20962 102 aa20.36■□□□□ 0.85
SNX11-212ENST00000583320 MCM4P33991 863 aa20.36■□□□□ 0.85
SNX11-212ENST00000583320 MKRN4PQ13434 485 aaPredicted RBP20.36■□□□□ 0.85
SNX11-212ENST00000583320 LY6KQ17RY6 165 aa20.36■□□□□ 0.85
SNX11-212ENST00000583320 SLC35G1Q2M3R5 365 aa20.36■□□□□ 0.85
SNX11-212ENST00000583320 FOXD4L5Q5VV16 416 aaPredicted RBP20.36■□□□□ 0.85
SNX11-212ENST00000583320 HFE2Q6ZVN8 426 aa20.36■□□□□ 0.85
SNX11-212ENST00000583320 FOXD4L4Q8WXT5 416 aaPredicted RBP20.36■□□□□ 0.85
SNX11-212ENST00000583320 MRPL38Q96DV4 380 aaKnown RBP20.36■□□□□ 0.85
SNX11-212ENST00000583320 AIFM3Q96NN9 605 aa20.36■□□□□ 0.85
SNX11-212ENST00000583320 HDAC6Q9UBN7 1215 aa20.36■□□□□ 0.85
SNX11-212ENST00000583320 GTF2IRD1Q9UHL9 959 aa20.36■□□□□ 0.85
SNX11-212ENST00000583320 DDX11L8A8MPP1 907 aa20.35■□□□□ 0.85
SNX11-212ENST00000583320 GOLGA6L22H0YM25 854 aa20.35■□□□□ 0.85
SNX11-212ENST00000583320 hCG_1984214I3L0E3 225 aa20.35■□□□□ 0.85
SNX11-212ENST00000583320 SAFBQ15424 915 aaKnown RBP eCLIP20.35■□□□□ 0.85
SNX11-212ENST00000583320 ZNF618Q5T7W0 954 aa20.35■□□□□ 0.85
SNX11-212ENST00000583320 BRAPQ7Z569 592 aa20.35■□□□□ 0.85
SNX11-212ENST00000583320 ZNF713Q8N859 430 aaPredicted RBP20.35■□□□□ 0.85
SNX11-212ENST00000583320 RRP36Q96EU6 259 aaKnown RBP20.35■□□□□ 0.85
SNX11-212ENST00000583320 MYH15Q9Y2K3 1946 aa20.35■□□□□ 0.85
SNX11-212ENST00000583320 TCHHQ07283 1943 aa20.34■□□□□ 0.85
SNX11-212ENST00000583320 C19orf67A6NJJ6 358 aa20.34■□□□□ 0.85
SNX11-212ENST00000583320 ZNF200P98182 395 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms