RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 FUCA2Q9BTY2 467 aa16.4■□□□□ 0.22
SENP3-208ENST00000583277 LRRC27Q9C0I9 530 aa16.4■□□□□ 0.22
SENP3-208ENST00000583277 VTA1Q9NP79 307 aa16.4■□□□□ 0.22
SENP3-208ENST00000583277 TUBE1Q9UJT0 475 aa16.4■□□□□ 0.22
SENP3-208ENST00000583277 KIAA1024Q9UPX6 916 aa16.4■□□□□ 0.22
SENP3-208ENST00000583277 SYNGAP1Q96PV0 1343 aa16.4■□□□□ 0.22
SENP3-208ENST00000583277 TNPO2O14787 897 aaKnown RBP16.39■□□□□ 0.21
SENP3-208ENST00000583277 SPATA31C1P0DKV0 1188 aa16.39■□□□□ 0.21
SENP3-208ENST00000583277 RGS2P41220 211 aa16.39■□□□□ 0.21
SENP3-208ENST00000583277 AFMP43652 599 aa16.39■□□□□ 0.21
SENP3-208ENST00000583277 VEGFBP49765 207 aa16.39■□□□□ 0.21
SENP3-208ENST00000583277 FCGRTP55899 365 aa16.39■□□□□ 0.21
SENP3-208ENST00000583277 NEDD9Q14511 834 aa16.39■□□□□ 0.21
SENP3-208ENST00000583277 STX1AQ16623 288 aa16.39■□□□□ 0.21
SENP3-208ENST00000583277 NT5DC1Q5TFE4 455 aa16.39■□□□□ 0.21
SENP3-208ENST00000583277 SV2BQ7L1I2 683 aa16.39■□□□□ 0.21
SENP3-208ENST00000583277 GRAMD1CQ8IYS0 662 aa16.39■□□□□ 0.21
SENP3-208ENST00000583277 SMARCE1Q969G3 411 aa16.39■□□□□ 0.21
SENP3-208ENST00000583277 SLC9A2Q9UBY0 812 aa16.39■□□□□ 0.21
SENP3-208ENST00000583277 SAMM50Q9Y512 469 aa16.39■□□□□ 0.21
SENP3-208ENST00000583277 CASP8AP2Q9UKL3 1982 aa16.39■□□□□ 0.21
SENP3-208ENST00000583277 POTEFA5A3E0 1075 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 FOXN1O15353 648 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 P4HBP07237 508 aaKnown RBP16.38■□□□□ 0.21
SENP3-208ENST00000583277 UBA1P22314 1058 aaKnown RBP16.38■□□□□ 0.21
SENP3-208ENST00000583277 CYP4A11Q02928 519 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 ECM1Q16610 540 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 POTEGQ6S5H5 508 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 FBXO16Q8IX29 292 aaPredicted RBP16.38■□□□□ 0.21
SENP3-208ENST00000583277 SPATA20Q8TB22 786 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 SCFD2Q8WU76 684 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 BLOC1S4Q9NUP1 217 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 ANO10Q9NW15 660 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 DNM3Q9UQ16 869 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 MYH9P35579 1960 aaKnown RBP16.38■□□□□ 0.21
SENP3-208ENST00000583277 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.38■□□□□ 0.21
SENP3-208ENST00000583277 CAVIN2O95810 425 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 PRR29P0C7W0 189 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 DPYDQ12882 1025 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 IRF5Q13568 498 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 TTLL4Q14679 1199 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 EEPD1Q7L9B9 569 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 TRIML1Q8N9V2 468 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 LRRC15Q8TF66 581 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 USP6NLQ92738 828 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 DYDC2Q96IM9 177 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 GSDMAQ96QA5 445 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 APBA2Q99767 749 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 LXNQ9BS40 222 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 TINF2Q9BSI4 451 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.38■□□□□ 0.21
SENP3-208ENST00000583277 RGL1Q9NZL6 768 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 PCDHA5Q9Y5H7 936 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 PCDHA10Q9Y5I2 948 aa16.38■□□□□ 0.21
SENP3-208ENST00000583277 DKC1O60832 514 aaKnown RBP eCLIP16.37■□□□□ 0.21
SENP3-208ENST00000583277 SLITRK3O94933 977 aa16.37■□□□□ 0.21
SENP3-208ENST00000583277 CCNE2O96020 404 aa16.37■□□□□ 0.21
SENP3-208ENST00000583277 LACTBP83111 547 aaPredicted RBP16.37■□□□□ 0.21
SENP3-208ENST00000583277 METTL7BQ6UX53 244 aa16.37■□□□□ 0.21
SENP3-208ENST00000583277 KCNK18Q7Z418 384 aa16.37■□□□□ 0.21
SENP3-208ENST00000583277 TPH2Q8IWU9 490 aa16.37■□□□□ 0.21
SENP3-208ENST00000583277 ERCC4Q92889 916 aaPredicted RBP16.37■□□□□ 0.21
SENP3-208ENST00000583277 MTRQ99707 1265 aa16.37■□□□□ 0.21
SENP3-208ENST00000583277 ZSWIM4Q9H7M6 989 aa16.37■□□□□ 0.21
SENP3-208ENST00000583277 RMND1Q9NWS8 449 aa16.37■□□□□ 0.21
SENP3-208ENST00000583277 PSAPP07602 524 aa16.36■□□□□ 0.21
SENP3-208ENST00000583277 QARSP47897 775 aaKnown RBP16.36■□□□□ 0.21
SENP3-208ENST00000583277 SARSP49591 514 aaKnown RBP16.36■□□□□ 0.21
SENP3-208ENST00000583277 ACTR2P61160 394 aa16.36■□□□□ 0.21
SENP3-208ENST00000583277 SP2Q02086 613 aa16.36■□□□□ 0.21
SENP3-208ENST00000583277 CTTNQ14247 550 aaKnown RBP16.36■□□□□ 0.21
SENP3-208ENST00000583277 MCM6Q14566 821 aa16.36■□□□□ 0.21
SENP3-208ENST00000583277 KIF22Q14807 665 aa16.36■□□□□ 0.21
SENP3-208ENST00000583277 OLFML2BQ68BL8 750 aa16.36■□□□□ 0.21
SENP3-208ENST00000583277 MIS18BP1Q6P0N0 1132 aa16.36■□□□□ 0.21
SENP3-208ENST00000583277 CNNM4Q6P4Q7 775 aa16.36■□□□□ 0.21
SENP3-208ENST00000583277 NPLOC4Q8TAT6 608 aa16.36■□□□□ 0.21
SENP3-208ENST00000583277 CCDC47Q96A33 483 aaKnown RBP16.36■□□□□ 0.21
SENP3-208ENST00000583277 NACC1Q96RE7 527 aa16.36■□□□□ 0.21
SENP3-208ENST00000583277 C7orf25Q9BPX7 421 aa16.36■□□□□ 0.21
SENP3-208ENST00000583277 TRIM9Q9C026 710 aa16.36■□□□□ 0.21
SENP3-208ENST00000583277 ABHD16BQ9H3Z7 469 aa16.36■□□□□ 0.21
SENP3-208ENST00000583277 DDX41Q9UJV9 622 aaKnown RBP16.36■□□□□ 0.21
SENP3-208ENST00000583277 RBM47A0AV96 593 aaKnown RBP16.35■□□□□ 0.21
SENP3-208ENST00000583277 GOLGA6L3A6NEY3 463 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 FARP2O94887 1054 aaPredicted RBP16.35■□□□□ 0.21
SENP3-208ENST00000583277 LYPLA2O95372 231 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 EYA4O95677 639 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 PLA2G4BP0C869 781 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 PSMC4P43686 418 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 NLRP12P59046 1061 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 PSMC5P62195 406 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 CUL4BQ13620 913 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 CCDC62Q6P9F0 684 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 CYFIP1Q7L576 1253 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 STAMQ92783 540 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 ATP6V0A1Q93050 837 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 BMP2KQ9NSY1 1161 aaPredicted RBP16.35■□□□□ 0.21
SENP3-208ENST00000583277 RNF186Q9NXI6 227 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 GJD2Q9UKL4 321 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms