RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 ATP8A2Q9NTI2 1148 aa11.53□□□□□ -0.56
TOP3A-214ENST00000582981 BLOC1S4Q9NUP1 217 aa11.53□□□□□ -0.56
TOP3A-214ENST00000582981 PCNTO95613 3336 aa11.53□□□□□ -0.56
TOP3A-214ENST00000582981 BCORQ6W2J9 1755 aa11.53□□□□□ -0.56
TOP3A-214ENST00000582981 M0R2N6 131 aa11.53□□□□□ -0.56
TOP3A-214ENST00000582981 USO1O60763 962 aaKnown RBP11.53□□□□□ -0.56
TOP3A-214ENST00000582981 GRM4Q14833 912 aa11.53□□□□□ -0.56
TOP3A-214ENST00000582981 TLDC1Q6P9B6 456 aa11.53□□□□□ -0.56
TOP3A-214ENST00000582981 NEK8Q86SG6 692 aa11.53□□□□□ -0.56
TOP3A-214ENST00000582981 EHBP1Q8NDI1 1231 aa11.53□□□□□ -0.56
TOP3A-214ENST00000582981 ACTR5Q9H9F9 607 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-214ENST00000582981 NOD2Q9HC29 1040 aa11.53□□□□□ -0.56
TOP3A-214ENST00000582981 BCS1LQ9Y276 419 aa11.53□□□□□ -0.56
TOP3A-214ENST00000582981 HYOU1Q9Y4L1 999 aa11.53□□□□□ -0.56
TOP3A-214ENST00000582981 DOCK2Q92608 1830 aa11.53□□□□□ -0.56
TOP3A-214ENST00000582981 ZNF233A6NK53 670 aa11.52□□□□□ -0.56
TOP3A-214ENST00000582981 ACTN1P12814 892 aa11.52□□□□□ -0.56
TOP3A-214ENST00000582981 RASA1P20936 1047 aa11.52□□□□□ -0.56
TOP3A-214ENST00000582981 TMOD1P28289 359 aa11.52□□□□□ -0.56
TOP3A-214ENST00000582981 SCTRP47872 440 aa11.52□□□□□ -0.56
TOP3A-214ENST00000582981 VWA3BQ502W6 1294 aa11.52□□□□□ -0.56
TOP3A-214ENST00000582981 CCDC47Q96A33 483 aaKnown RBP11.52□□□□□ -0.56
TOP3A-214ENST00000582981 CALML4Q96GE6 196 aa11.52□□□□□ -0.56
TOP3A-214ENST00000582981 NLRP3Q96P20 1036 aa11.52□□□□□ -0.56
TOP3A-214ENST00000582981 IKZF4Q9H2S9 585 aa11.52□□□□□ -0.56
TOP3A-214ENST00000582981 ADAMTS1Q9UHI8 967 aa11.52□□□□□ -0.56
TOP3A-214ENST00000582981 GOLGA6L10A6NI86 522 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 PALMO75781 387 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 FGRP09769 529 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 RWDD2BP57060 319 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 SNAP25P60880 206 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 ANKRD20A8PQ5CZ79 823 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 KDM7AQ6ZMT4 941 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 SV2BQ7L1I2 683 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 FAM133AQ8N9E0 248 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 DDX12PQ92771 950 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 TATDN2Q93075 761 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 DHTKD1Q96HY7 919 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-214ENST00000582981 PNMA5Q96PV4 448 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 LSM14BQ9BX40 385 aaKnown RBP11.52□□□□□ -0.57
TOP3A-214ENST00000582981 TLR10Q9BXR5 811 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 CCSER1Q9C0I3 900 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 STIM2Q9P246 746 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 ZNF652Q9Y2D9 606 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 DISP2A7MBM2 1401 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 GNPATO15228 680 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 HEXIM1O94992 359 aaKnown RBP11.52□□□□□ -0.57
TOP3A-214ENST00000582981 SNUPNO95149 360 aaKnown RBP11.52□□□□□ -0.57
TOP3A-214ENST00000582981 KLRC1P26715 233 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 CALCRLQ16602 461 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 QPCTQ16769 361 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 TTBK2Q6IQ55 1244 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 REXO1Q8N1G1 1221 aaKnown RBP11.52□□□□□ -0.57
TOP3A-214ENST00000582981 TBC1D5Q92609 795 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 SPAG5Q96R06 1193 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 FAM167BQ9BTA0 163 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 SEC63Q9UGP8 760 aaKnown RBP11.52□□□□□ -0.57
TOP3A-214ENST00000582981 SIK3Q9Y2K2 1263 aa11.52□□□□□ -0.57
TOP3A-214ENST00000582981 BICDL2A1A5D9 508 aa11.51□□□□□ -0.57
TOP3A-214ENST00000582981 FAM196BA6NMK8 535 aa11.51□□□□□ -0.57
TOP3A-214ENST00000582981 E9PMD0 336 aa11.51□□□□□ -0.57
TOP3A-214ENST00000582981 STAT3P40763 770 aa11.51□□□□□ -0.57
TOP3A-214ENST00000582981 HLTFQ14527 1009 aaKnown RBP eCLIP11.51□□□□□ -0.57
TOP3A-214ENST00000582981 EMBQ6PCB8 327 aa11.51□□□□□ -0.57
TOP3A-214ENST00000582981 BZW1Q7L1Q6 419 aaKnown RBP11.51□□□□□ -0.57
TOP3A-214ENST00000582981 ADAT2Q7Z6V5 191 aaKnown RBP11.51□□□□□ -0.57
TOP3A-214ENST00000582981 CPLX4Q7Z7G2 160 aa11.51□□□□□ -0.57
TOP3A-214ENST00000582981 TRIM58Q8NG06 486 aa11.51□□□□□ -0.57
TOP3A-214ENST00000582981 LARP4BQ92615 738 aaKnown RBP11.51□□□□□ -0.57
TOP3A-214ENST00000582981 EPB41P11171 864 aaKnown RBP11.51□□□□□ -0.57
TOP3A-214ENST00000582981 BTDP43251 543 aa11.51□□□□□ -0.57
TOP3A-214ENST00000582981 SLC8A3P57103 927 aa11.51□□□□□ -0.57
TOP3A-214ENST00000582981 FAM98CQ17RN3 349 aaKnown RBP11.51□□□□□ -0.57
TOP3A-214ENST00000582981 SHROOM1Q2M3G4 852 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-214ENST00000582981 SPTY2D1Q68D10 685 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-214ENST00000582981 CACNA2D3Q8IZS8 1091 aa11.51□□□□□ -0.57
TOP3A-214ENST00000582981 HVCN1Q96D96 273 aa11.51□□□□□ -0.57
TOP3A-214ENST00000582981 SETDB2Q96T68 719 aa11.51□□□□□ -0.57
TOP3A-214ENST00000582981 AP1M1Q9BXS5 423 aa11.51□□□□□ -0.57
TOP3A-214ENST00000582981 PLAGL2Q9UPG8 496 aa11.51□□□□□ -0.57
TOP3A-214ENST00000582981 MEIS1O00470 390 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 TLR2O60603 784 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 ANP32DO95626 131 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 ATP6V1G2O95670 118 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 PAFAH1B1P43034 410 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 CDK8P49336 464 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 GNPTABQ3T906 1256 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 TRIM31Q9BZY9 425 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 TRPC6Q9Y210 931 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 GMNCA6NCL1 334 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 KCNMA1Q12791 1236 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 KLHDC7AQ5VTJ3 777 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 CNNM4Q6P4Q7 775 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 TBC1D1Q86TI0 1168 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-214ENST00000582981 CUL5Q93034 780 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 ALS2CR12Q96Q35 445 aa11.5□□□□□ -0.57
TOP3A-214ENST00000582981 PYM1Q9BRP8 204 aaKnown RBP11.5□□□□□ -0.57
TOP3A-214ENST00000582981 NUCKS1Q9H1E3 243 aaKnown RBP11.5□□□□□ -0.57
TOP3A-214ENST00000582981 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.5□□□□□ -0.576e-9■■■■■ 134.6
TOP3A-214ENST00000582981 G3BP2Q9UN86 482 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms