RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 CCL23P55773 120 aa14.32□□□□□ -0.12
SMARCE1-218ENST00000582955 ITGB3BPQ13352 177 aaPredicted RBP14.32□□□□□ -0.12
SMARCE1-218ENST00000582955 TRIM29Q14134 588 aa14.32□□□□□ -0.12
SMARCE1-218ENST00000582955 NPY5RQ15761 445 aa14.32□□□□□ -0.12
SMARCE1-218ENST00000582955 KRT25Q7Z3Z0 450 aa14.32□□□□□ -0.12
SMARCE1-218ENST00000582955 TBC1D32Q96NH3 1257 aa14.32□□□□□ -0.12
SMARCE1-218ENST00000582955 ZNF577Q9BSK1 485 aa14.32□□□□□ -0.12
SMARCE1-218ENST00000582955 SH2B1Q9NRF2 756 aaPredicted RBP14.32□□□□□ -0.12
SMARCE1-218ENST00000582955 CCDC194A0A1B0GVG4 234 aa14.31□□□□□ -0.12
SMARCE1-218ENST00000582955 GSTTP1A0A1W2PQM5 241 aa14.31□□□□□ -0.12
SMARCE1-218ENST00000582955 M0R2N6 131 aa14.31□□□□□ -0.12
SMARCE1-218ENST00000582955 IPO5O00410 1097 aaKnown RBP14.31□□□□□ -0.12
SMARCE1-218ENST00000582955 CSF2RAP15509 400 aa14.31□□□□□ -0.12
SMARCE1-218ENST00000582955 CIITAP33076 1130 aa14.31□□□□□ -0.12
SMARCE1-218ENST00000582955 USP11P51784 963 aa14.31□□□□□ -0.12
SMARCE1-218ENST00000582955 PPIGQ13427 754 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMARCE1-218ENST00000582955 NONOQ15233 471 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMARCE1-218ENST00000582955 GLG1Q92896 1179 aa14.31□□□□□ -0.12
SMARCE1-218ENST00000582955 BRMS1Q9HCU9 246 aa14.31□□□□□ -0.12
SMARCE1-218ENST00000582955 TCEAL9Q9UHQ7 104 aa14.31□□□□□ -0.12
SMARCE1-218ENST00000582955 C17orf102A2RUQ5 167 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 SMIM10L2AP0DMW4 78 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 SMIM10L2BP0DMW5 78 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 KCNA4P22459 653 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 MARK3P27448 753 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 KRT2P35908 639 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 EPHB4P54760 987 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 ACTR2P61160 394 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 BFSP2Q13515 415 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 SHHQ15465 462 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 INF2Q27J81 1249 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 C9orf50Q5SZB4 431 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 CCDC155Q8N6L0 562 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 RETREG2Q8NC44 543 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 OXER1Q8TDS5 423 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 LLPHQ9BRT6 129 aaKnown RBP14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 BACH2Q9BYV9 841 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 WNT8AQ9H1J5 351 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 AZI2Q9H6S1 392 aa14.3□□□□□ -0.12
SMARCE1-218ENST00000582955 TDP2O95551 362 aa14.29□□□□□ -0.12
SMARCE1-218ENST00000582955 ACRP10323 421 aa14.29□□□□□ -0.12
SMARCE1-218ENST00000582955 FXR1P51114 621 aaKnown RBP eCLIP14.29□□□□□ -0.12
SMARCE1-218ENST00000582955 ZNF200P98182 395 aaPredicted RBP14.29□□□□□ -0.12
SMARCE1-218ENST00000582955 PIK3AP1Q6ZUJ8 805 aa14.29□□□□□ -0.12
SMARCE1-218ENST00000582955 SCLYQ96I15 445 aa14.29□□□□□ -0.12
SMARCE1-218ENST00000582955 SMARCAD1Q9H4L7 1026 aa14.29□□□□□ -0.12
SMARCE1-218ENST00000582955 TBC1D22BQ9NU19 505 aa14.29□□□□□ -0.12
SMARCE1-218ENST00000582955 ERAP1Q9NZ08 941 aa14.29□□□□□ -0.12
SMARCE1-218ENST00000582955 EMSYQ7Z589 1322 aa14.29□□□□□ -0.12
SMARCE1-218ENST00000582955 PITPNM1O00562 1244 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 BACH1O14867 736 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 EDIL3O43854 480 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 CCNE2O96020 404 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 MMP1P03956 469 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 GNAT1P11488 350 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 HMGN5P82970 282 aaKnown RBP14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 GUCY1B3Q02153 619 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 NR5A1Q13285 461 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 PTK7Q13308 1070 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 HIC1Q14526 733 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 LETM2Q2VYF4 491 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 KRT40Q6A162 431 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 FAM184AQ8NB25 1140 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 IL27Q8NEV9 243 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 CAGE1Q8TC20 777 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 ATP6V0A1Q93050 837 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 LENG9Q96B70 501 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 RNPC3Q96LT9 517 aaKnown RBP14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 CTAGE1Q96RT6 745 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.28□□□□□ -0.123e-7■■■□□ 15.4
SMARCE1-218ENST00000582955 RNPEPQ9H4A4 650 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 IL23AQ9NPF7 189 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 SETD4Q9NVD3 440 aa14.28□□□□□ -0.12
SMARCE1-218ENST00000582955 MSH4O15457 936 aa14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 DHX15O43143 795 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 LGR5O75473 907 aa14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 STAT5BP51692 787 aa14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 KRT76Q01546 638 aa14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 PPFIA1Q13136 1202 aa14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 LRIT3Q3SXY7 679 aa14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 Q4G0T1 1027 aa14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 MIS18BP1Q6P0N0 1132 aa14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 PSRC1Q6PGN9 363 aaPredicted RBP14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 MOXD1Q6UVY6 613 aa14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 DEFB128Q7Z7B8 93 aa14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 NEK8Q86SG6 692 aa14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 DIS3L2Q8IYB7 885 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 DHX38Q92620 1227 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 C8orf76Q96K31 380 aa14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 PCYT2Q99447 389 aa14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 DDX25Q9UHL0 483 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 TRPC6Q9Y210 931 aa14.27□□□□□ -0.13
SMARCE1-218ENST00000582955 NRCAMQ92823 1304 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 CYP3A7-CYP3A51PA0A087WV96 503 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 BTBD18B2RXH4 712 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 SOX1O00570 391 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 TREHO43280 583 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 GAS7O60861 476 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 ATG7O95352 703 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 CD2BP2O95400 341 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms