RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 EPHA7Q15375 998 aa12.95□□□□□ -0.34
GGA3-211ENST00000582232 ABHD15Q6UXT9 468 aa12.95□□□□□ -0.34
GGA3-211ENST00000582232 PPTC7Q8NI37 304 aa12.95□□□□□ -0.34
GGA3-211ENST00000582232 SH3TC2Q8TF17 1288 aa12.95□□□□□ -0.34
GGA3-211ENST00000582232 COPS5Q92905 334 aa12.95□□□□□ -0.34
GGA3-211ENST00000582232 ARMC5Q96C12 935 aa12.95□□□□□ -0.34
GGA3-211ENST00000582232 CLIC6Q96NY7 704 aa12.95□□□□□ -0.34
GGA3-211ENST00000582232 UIMC1Q96RL1 719 aa12.95□□□□□ -0.34
GGA3-211ENST00000582232 UPF3AQ9H1J1 476 aaKnown RBP12.95□□□□□ -0.34
GGA3-211ENST00000582232 PCDHA10Q9Y5I2 948 aa12.95□□□□□ -0.34
GGA3-211ENST00000582232 FRMPD3Q5JV73 1810 aa12.95□□□□□ -0.34
GGA3-211ENST00000582232 MYH9P35579 1960 aaKnown RBP12.94□□□□□ -0.34
GGA3-211ENST00000582232 FAM237AA0A1B0GTK4 181 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 GSTTP1A0A1W2PQM5 241 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 A6NJR5 290 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 GOLGA6L22H0YM25 854 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 DDX39AO00148 427 aaKnown RBP12.94□□□□□ -0.34
GGA3-211ENST00000582232 EML1O00423 815 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 PPFIA4O75335 1185 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 RARBP10826 455 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 MUTP22033 750 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 CNGA1P29973 690 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 ACTR2P61160 394 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 HSDL1Q3SXM5 330 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 GJC2Q5T442 439 aaPredicted RBP12.94□□□□□ -0.34
GGA3-211ENST00000582232 RESP18Q5W5W9 173 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 SHC4Q6S5L8 630 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 MIER3Q7Z3K6 550 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 TLK2Q86UE8 772 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 KCTD17Q8N5Z5 321 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 NEK9Q8TD19 979 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 SEPT1Q8WYJ6 367 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 SPATA33Q96N06 139 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 GPR20Q99678 358 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 HSD17B14Q9BPX1 270 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 POLR3CQ9BUI4 534 aaPredicted RBP12.94□□□□□ -0.34
GGA3-211ENST00000582232 CCSER1Q9C0I3 900 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 PAK6Q9NQU5 681 aaPredicted RBP12.94□□□□□ -0.34
GGA3-211ENST00000582232 DISC1Q9NRI5 854 aa12.94□□□□□ -0.34
GGA3-211ENST00000582232 DDX20Q9UHI6 824 aaKnown RBP12.94□□□□□ -0.34
GGA3-211ENST00000582232 CTAGE5O15320 804 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 DYNC1LI2O43237 492 aaPredicted RBP12.93□□□□□ -0.34
GGA3-211ENST00000582232 LGR5O75473 907 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 P4HBP07237 508 aaKnown RBP12.93□□□□□ -0.34
GGA3-211ENST00000582232 PSAPP07602 524 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 SUPT20HL2P0C7V6 817 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 RPA1P27694 616 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 UBE2HP62256 183 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 HYIQ5T013 277 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 HAUS3Q68CZ6 603 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 LHX8Q68G74 356 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 NCAPH2Q6IBW4 605 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 MIS18BP1Q6P0N0 1132 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 ERMNQ8TAM6 284 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 ZNF333Q96JL9 665 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 EIF2AK1Q9BQI3 630 aaKnown RBP12.93□□□□□ -0.34
GGA3-211ENST00000582232 MMTAG2Q9BU76 263 aaKnown RBP12.93□□□□□ -0.34
GGA3-211ENST00000582232 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.93□□□□□ -0.34
GGA3-211ENST00000582232 AP5M1Q9H0R1 490 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 TUFT1Q9NNX1 390 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 LMBRD1Q9NUN5 540 aa12.93□□□□□ -0.34
GGA3-211ENST00000582232 EMSYQ7Z589 1322 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 SYNRGQ9UMZ2 1314 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 GOLGA6L4A6NEF3 574 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 NOP56O00567 594 aaKnown RBP12.92□□□□□ -0.34
GGA3-211ENST00000582232 CHMP2AO43633 222 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 ADAMTS4O75173 837 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 PRPF40AO75400 957 aaKnown RBP12.92□□□□□ -0.34
GGA3-211ENST00000582232 SLITRK3O94933 977 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 MMP3P08254 477 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 SPATA31C1P0DKV0 1188 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 PTGS1P23219 599 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 CST5P28325 142 aaPredicted RBP12.92□□□□□ -0.34
GGA3-211ENST00000582232 MCM4P33991 863 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 UBA7P41226 1012 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 CPT1AP50416 773 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 KRT79Q5XKE5 535 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 USP49Q70CQ1 688 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 KLHDC9Q8NEP7 349 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 AFAP1L1Q8TED9 768 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 AFG1LQ8WV93 481 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 SYMPKQ92797 1274 aaKnown RBP12.92□□□□□ -0.34
GGA3-211ENST00000582232 EPSTI1Q96J88 318 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 SPC25Q9HBM1 224 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 TELO2Q9Y4R8 837 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 MAFBQ9Y5Q3 323 aaPredicted RBP12.92□□□□□ -0.34
GGA3-211ENST00000582232 LOXHD1Q8IVV2 1947 aa12.92□□□□□ -0.34
GGA3-211ENST00000582232 IGSF9BQ9UPX0 1349 aa12.91□□□□□ -0.34
GGA3-211ENST00000582232 KDM3AQ9Y4C1 1321 aa12.91□□□□□ -0.34
GGA3-211ENST00000582232 PP2D1A8MPX8 630 aa12.91□□□□□ -0.34
GGA3-211ENST00000582232 KPNA6O60684 536 aa12.91□□□□□ -0.34
GGA3-211ENST00000582232 DKC1O60832 514 aaKnown RBP eCLIP12.91□□□□□ -0.34
GGA3-211ENST00000582232 GADD45BO75293 160 aaPredicted RBP12.91□□□□□ -0.34
GGA3-211ENST00000582232 LYPLA2O95372 231 aa12.91□□□□□ -0.34
GGA3-211ENST00000582232 CCL5P13501 91 aa12.91□□□□□ -0.34
GGA3-211ENST00000582232 CAPN2P17655 700 aa12.91□□□□□ -0.34
GGA3-211ENST00000582232 CDC25AP30304 524 aa12.91□□□□□ -0.34
GGA3-211ENST00000582232 TCF7P36402 384 aaPredicted RBP12.91□□□□□ -0.34
GGA3-211ENST00000582232 TXLNAP40222 546 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms