RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 B3GNT9Q6UX72 402 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 C16orf59Q7L2K0 433 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 PLPPR4Q7Z2D5 763 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 CCDC83Q8IWF9 413 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 TDHQ8IZJ6 230 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 OXER1Q8TDS5 423 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 RIT2Q99578 217 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 SDF4Q9BRK5 362 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 HIPK3Q9H422 1215 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 RNPEPQ9H4A4 650 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 SMARCAD1Q9H4L7 1026 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 JPH1Q9HDC5 661 aaPredicted RBP14.35□□□□□ -0.11
SNORD55-201ENST00000581525 PRDM5Q9NQX1 630 aaPredicted RBP14.35□□□□□ -0.11
SNORD55-201ENST00000581525 MSH4O15457 936 aa14.34□□□□□ -0.11
SNORD55-201ENST00000581525 SORBS3O60504 671 aa14.34□□□□□ -0.11
SNORD55-201ENST00000581525 DTNBO60941 627 aa14.34□□□□□ -0.11
SNORD55-201ENST00000581525 CD2BP2O95400 341 aaKnown RBP14.34□□□□□ -0.11
SNORD55-201ENST00000581525 CCNE2O96020 404 aa14.34□□□□□ -0.11
SNORD55-201ENST00000581525 PTK7Q13308 1070 aa14.34□□□□□ -0.11
SNORD55-201ENST00000581525 PTGISQ16647 500 aa14.34□□□□□ -0.11
SNORD55-201ENST00000581525 TRIM71Q2Q1W2 868 aaKnown RBP14.34□□□□□ -0.11
SNORD55-201ENST00000581525 KRT40Q6A162 431 aa14.34□□□□□ -0.11
SNORD55-201ENST00000581525 ZNF746Q6NUN9 644 aaPredicted RBP14.34□□□□□ -0.11
SNORD55-201ENST00000581525 C7orf31Q8N865 590 aa14.34□□□□□ -0.11
SNORD55-201ENST00000581525 CAGE1Q8TC20 777 aa14.34□□□□□ -0.11
SNORD55-201ENST00000581525 AFAP1L1Q8TED9 768 aa14.34□□□□□ -0.11
SNORD55-201ENST00000581525 SLC5A5Q92911 643 aa14.34□□□□□ -0.11
SNORD55-201ENST00000581525 TMX3Q96JJ7 454 aa14.34□□□□□ -0.11
SNORD55-201ENST00000581525 ZNF577Q9BSK1 485 aa14.34□□□□□ -0.11
SNORD55-201ENST00000581525 UBE2OQ9C0C9 1292 aaKnown RBP14.34□□□□□ -0.11
SNORD55-201ENST00000581525 WNT8AQ9H1J5 351 aa14.34□□□□□ -0.11
SNORD55-201ENST00000581525 PSMD10O75832 226 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 CYP2C9P11712 490 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 GCFC2P16383 781 aaKnown RBP14.33□□□□□ -0.12
SNORD55-201ENST00000581525 SLC26A2P50443 739 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 EPHB4P54760 987 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 FPGSQ05932 587 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 PPIGQ13427 754 aaKnown RBP eCLIP14.33□□□□□ -0.12
SNORD55-201ENST00000581525 PRR16Q569H4 304 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 EARS2Q5JPH6 523 aaKnown RBP14.33□□□□□ -0.12
SNORD55-201ENST00000581525 RASIP1Q5U651 963 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 RPAINQ86UA6 219 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 SERINC5Q86VE9 423 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 TMEM199Q8N511 208 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 FBXO18Q8NFZ0 1043 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 ETNPPLQ8TBG4 499 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 DHX38Q92620 1227 aaKnown RBP14.33□□□□□ -0.12
SNORD55-201ENST00000581525 NAP1L4Q99733 375 aaKnown RBP14.33□□□□□ -0.12
SNORD55-201ENST00000581525 KCNMB3Q9NPA1 279 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 ERAP1Q9NZ08 941 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 PCDH10Q9P2E7 1040 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 ZNF215Q9UL58 517 aaPredicted RBP14.33□□□□□ -0.12
SNORD55-201ENST00000581525 UMODL1Q5DID0 1318 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 NRCAMQ92823 1304 aa14.33□□□□□ -0.12
SNORD55-201ENST00000581525 BTBD18B2RXH4 712 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 TBX3O15119 743 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 PARNO95453 639 aaKnown RBP14.32□□□□□ -0.12
SNORD55-201ENST00000581525 SMIM10L2AP0DMW4 78 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 SMIM10L2BP0DMW5 78 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 CYP2C18P33260 490 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 KRT2P35908 639 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 KRT76Q01546 638 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 NR5A1Q13285 461 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 BFSP2Q13515 415 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 GPNMBQ14956 572 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 INF2Q27J81 1249 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 FAM47CQ5HY64 1035 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 TRAF7Q6Q0C0 670 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 NEK8Q86SG6 692 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 SMAP1Q8IYB5 467 aaPredicted RBP14.32□□□□□ -0.12
SNORD55-201ENST00000581525 FAM20AQ96MK3 541 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 IL23AQ9NPF7 189 aa14.32□□□□□ -0.12
SNORD55-201ENST00000581525 MAFBQ9Y5Q3 323 aaPredicted RBP14.32□□□□□ -0.12
SNORD55-201ENST00000581525 SZT2Q5T011 3432 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 TRIOBPQ9H2D6 2365 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 CCDC194A0A1B0GVG4 234 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 C17orf102A2RUQ5 167 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 MBLAC1A4D2B0 266 aaPredicted RBP14.31□□□□□ -0.12
SNORD55-201ENST00000581525 TDP2O95551 362 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 IQCF3P0C7M6 154 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 GNAT1P11488 350 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 CSF2RAP15509 400 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 RFC2P35250 354 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 FXR1P51114 621 aaKnown RBP eCLIP14.31□□□□□ -0.12
SNORD55-201ENST00000581525 STAT5BP51692 787 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 CUL4AQ13619 759 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 SHHQ15465 462 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 TMEM240Q5SV17 173 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 UTP14CQ5TAP6 766 aaKnown RBP14.31□□□□□ -0.12
SNORD55-201ENST00000581525 GPR153Q6NV75 609 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 PIK3AP1Q6ZUJ8 805 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 TRIM50Q86XT4 487 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 DIS3L2Q8IYB7 885 aaKnown RBP14.31□□□□□ -0.12
SNORD55-201ENST00000581525 RDM1Q8NG50 284 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 PPP1R13LQ8WUF5 828 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 TNPO1Q92973 898 aaKnown RBP14.31□□□□□ -0.12
SNORD55-201ENST00000581525 PPP1R12CQ9BZL4 782 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 FOXP1Q9H334 677 aaPredicted RBP14.31□□□□□ -0.12
SNORD55-201ENST00000581525 BRMS1Q9HCU9 246 aa14.31□□□□□ -0.12
SNORD55-201ENST00000581525 PKD2L1Q9P0L9 805 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms