RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 PDHBP11177 359 aa9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 NCLP19338 710 aaKnown RBP9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 GUCY1A2P33402 732 aa9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 NHLH1Q02575 133 aa9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 MAP3K10Q02779 954 aa9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 GNL2Q13823 731 aaKnown RBP9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 RRP1BQ14684 758 aaKnown RBP9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 SAFBQ15424 915 aaKnown RBP eCLIP9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 ASPRV1Q53RT3 343 aa9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 CCDC84Q86UT8 332 aaPredicted RBP9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 STAG2Q8N3U4 1231 aa9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 SRBD1Q8N5C6 995 aaKnown RBP9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 GAS2L1Q99501 681 aaPredicted RBP9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 SH2D4AQ9H788 454 aa9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 PRDM5Q9NQX1 630 aaPredicted RBP9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 MORF4L1Q9UBU8 362 aa9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 MAD2L2Q9UI95 211 aa9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 ATAD5Q96QE3 1844 aa9.68□□□□□ -0.86
SUPT4H1-206ENST00000581204 CNTNAP5Q8WYK1 1306 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 hCG_1642624A0A1W2PR95 340 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 PEX10O60683 326 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 CTNND1O60716 968 aaKnown RBP9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 NR3C2P08235 984 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 PTMSP20962 102 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 MCM4P33991 863 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 GCLCP48506 637 aaPredicted RBP9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 JAG1P78504 1218 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 NNTQ13423 1086 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 TRIM60Q495X7 471 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 SLFN13Q68D06 897 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 KRT40Q6A162 431 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 SLC39A5Q6ZMH5 540 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 FBXO18Q8NFZ0 1043 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 DCAF4Q8WV16 495 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 SOCS4Q8WXH5 440 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 MKL1Q969V6 931 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 RRP36Q96EU6 259 aaKnown RBP9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 AIFM3Q96NN9 605 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 ZSCAN16Q9H4T2 348 aaPredicted RBP9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 ETNK1Q9HBU6 452 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 VAT1LQ9HCJ6 419 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 GINM1Q9NU53 330 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 PLA2G2EQ9NZK7 142 aa9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 SEC63Q9UGP8 760 aaKnown RBP9.67□□□□□ -0.86
SUPT4H1-206ENST00000581204 PLXNA1Q9UIW2 1896 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 TRIM75PA6NK02 468 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 ADH1AP07327 375 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 SCG2P13521 617 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 SMARCA1P28370 1054 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 SLC1A4P43007 532 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 ZNF543Q08ER8 600 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 GPATCH4Q5T3I0 446 aaKnown RBP9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 CLEC17AQ6ZS10 378 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 RASGRP2Q7LDG7 609 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 GMCL1P1Q8NEA9 526 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 LPAR1Q92633 364 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 VTI1AQ96AJ9 217 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 FEZ1Q99689 392 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 SPZ1Q9BXG8 430 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 PBX4Q9BYU1 374 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 PICK1Q9NRD5 415 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 GJB4Q9NTQ9 266 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 SYNPO2Q9UMS6 1093 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 TCHHQ07283 1943 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 CFAP54Q96N23 3096 aa9.66□□□□□ -0.86
SUPT4H1-206ENST00000581204 F5H6K3 240 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 SNHG28P0DPA3 235 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 SERPINB4P48594 390 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 DNM1Q05193 864 aaKnown RBP9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 KLRC3Q07444 240 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 IKQ13123 557 aaPredicted RBP9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 RESTQ13127 1097 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 PKN1Q16512 942 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 PFKFB3Q16875 520 aaPredicted RBP9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 KCTD1Q719H9 257 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 HOMER1Q86YM7 354 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 SIAH1Q8IUQ4 282 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 ZNF396Q96N95 335 aaPredicted RBP9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 UBA5Q9GZZ9 404 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 ASCC2Q9H1I8 757 aaPredicted RBP9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 CPVLQ9H3G5 476 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 BRMS1Q9HCU9 246 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 TXNRD2Q9NNW7 524 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 FLRT1Q9NZU1 646 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 VPS54Q9P1Q0 977 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 DDX20Q9UHI6 824 aaKnown RBP9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 KCNJ14Q9UNX9 436 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 TMX2Q9Y320 296 aa9.65□□□□□ -0.86
SUPT4H1-206ENST00000581204 A0A1W2PRG0 241 aa9.64□□□□□ -0.87
SUPT4H1-206ENST00000581204 GRXCR1A8MXD5 290 aa9.64□□□□□ -0.87
SUPT4H1-206ENST00000581204 PI4K2BG5E9Z4 385 aa9.64□□□□□ -0.87
SUPT4H1-206ENST00000581204 NDUFB10O96000 172 aa9.64□□□□□ -0.87
SUPT4H1-206ENST00000581204 IGHA2P01877 340 aa9.64□□□□□ -0.87
SUPT4H1-206ENST00000581204 MMP1P03956 469 aa9.64□□□□□ -0.87
SUPT4H1-206ENST00000581204 BMP3P12645 472 aa9.64□□□□□ -0.87
SUPT4H1-206ENST00000581204 SLC16A2P36021 539 aa9.64□□□□□ -0.87
SUPT4H1-206ENST00000581204 SMTNP53814 917 aa9.64□□□□□ -0.87
SUPT4H1-206ENST00000581204 NLRP5P59047 1200 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms