RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 MCM10Q7L590 875 aa8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 TMPRSS7Q7RTY8 843 aa8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 SP8Q8IXZ3 490 aa8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 ASCC2Q9H1I8 757 aaPredicted RBP8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 MIS18AQ9NYP9 233 aa8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 MAP3K15Q6ZN16 1313 aa8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 RTL9Q8NET4 1388 aa8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 IBTKQ9P2D0 1353 aaPredicted RBP8.44□□□□□ -1.06
PPP4R1-216ENST00000580283 KDM3BQ7LBC6 1761 aa8.43□□□□□ -1.06
PPP4R1-216ENST00000580283 UBOX5O94941 541 aa8.43□□□□□ -1.06
PPP4R1-216ENST00000580283 HSPA5P11021 654 aaKnown RBP8.43□□□□□ -1.06
PPP4R1-216ENST00000580283 JUNBP17275 347 aaPredicted RBP8.43□□□□□ -1.06
PPP4R1-216ENST00000580283 TPP2P29144 1249 aaPredicted RBP8.43□□□□□ -1.06
PPP4R1-216ENST00000580283 POLR2BP30876 1174 aaKnown RBP8.43□□□□□ -1.06
PPP4R1-216ENST00000580283 TM4SF4P48230 202 aa8.43□□□□□ -1.06
PPP4R1-216ENST00000580283 RAD51AP2Q09MP3 1159 aa8.43□□□□□ -1.06
PPP4R1-216ENST00000580283 PAK2Q13177 524 aa8.43□□□□□ -1.06
PPP4R1-216ENST00000580283 DPP8Q6V1X1 898 aaPredicted RBP8.43□□□□□ -1.06
PPP4R1-216ENST00000580283 LRRN4CLQ8ND94 238 aa8.43□□□□□ -1.06
PPP4R1-216ENST00000580283 ANTXR1Q9H6X2 564 aa8.43□□□□□ -1.06
PPP4R1-216ENST00000580283 KNSTRNQ9Y448 316 aa8.43□□□□□ -1.06
PPP4R1-216ENST00000580283 DDX60Q8IY21 1712 aaKnown RBP8.43□□□□□ -1.06
PPP4R1-216ENST00000580283 CUL9Q8IWT3 2517 aa8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 UNC80Q8N2C7 3258 aa8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 MEIS3P2A8K0S8 358 aa8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 NME1P15531 152 aaKnown RBP8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 CCNFP41002 786 aa8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 CLEC16AQ2KHT3 1053 aa8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 LRP10Q7Z4F1 713 aa8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 CREG2Q8IUH2 290 aa8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 SUPT20HQ8NEM7 779 aa8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 DCPSQ96C86 337 aaKnown RBP8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 CDCA5Q96FF9 252 aa8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 ASIC4Q96FT7 647 aa8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 SPATA32Q96LK8 384 aa8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 GPR62Q9BZJ7 368 aa8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 DUSP15Q9H1R2 295 aaPredicted RBP8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 SCAF8Q9UPN6 1271 aaKnown RBP8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 LAMB1P07942 1786 aa8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 ZNF646O15015 1829 aaPredicted RBP8.42□□□□□ -1.06
PPP4R1-216ENST00000580283 U2SURPO15042 1029 aaKnown RBP8.41□□□□□ -1.06
PPP4R1-216ENST00000580283 CLEC3AO75596 197 aa8.41□□□□□ -1.06
PPP4R1-216ENST00000580283 BBOX1O75936 387 aa8.41□□□□□ -1.06
PPP4R1-216ENST00000580283 ITGB5P18084 799 aa8.41□□□□□ -1.06
PPP4R1-216ENST00000580283 EN2P19622 333 aaPredicted RBP8.41□□□□□ -1.06
PPP4R1-216ENST00000580283 CAP1Q01518 475 aa8.41□□□□□ -1.06
PPP4R1-216ENST00000580283 COL9A2Q14055 689 aaPredicted RBP8.41□□□□□ -1.06
PPP4R1-216ENST00000580283 ATG4DQ86TL0 474 aaPredicted RBP8.41□□□□□ -1.06
PPP4R1-216ENST00000580283 CCDC120Q96HB5 630 aa8.41□□□□□ -1.06
PPP4R1-216ENST00000580283 DBNDD1Q9H9R9 158 aa8.41□□□□□ -1.06
PPP4R1-216ENST00000580283 POLLQ9UGP5 575 aa8.41□□□□□ -1.06
PPP4R1-216ENST00000580283 DUSP13Q9UII6 198 aa8.41□□□□□ -1.06
PPP4R1-216ENST00000580283 HDAC9Q9UKV0 1011 aa8.41□□□□□ -1.06
PPP4R1-216ENST00000580283 RRP7AQ9Y3A4 280 aaKnown RBP8.41□□□□□ -1.06
PPP4R1-216ENST00000580283 UBE2Q2LH0YL09 131 aa8.4□□□□□ -1.06
PPP4R1-216ENST00000580283 MYL6BP14649 208 aa8.4□□□□□ -1.06
PPP4R1-216ENST00000580283 PRKAR2BP31323 418 aa8.4□□□□□ -1.06
PPP4R1-216ENST00000580283 PRAMEF18Q5VWM3 479 aa8.4□□□□□ -1.06
PPP4R1-216ENST00000580283 TSPYL5Q86VY4 417 aaPredicted RBP8.4□□□□□ -1.06
PPP4R1-216ENST00000580283 GPRASP2Q96D09 838 aa8.4□□□□□ -1.06
PPP4R1-216ENST00000580283 GGA3Q9NZ52 723 aa8.4□□□□□ -1.06
PPP4R1-216ENST00000580283 LAMA3Q16787 3333 aa8.39□□□□□ -1.07
PPP4R1-216ENST00000580283 WASH4PA8MWX3 477 aa8.39□□□□□ -1.07
PPP4R1-216ENST00000580283 TNFRSF10CO14798 259 aa8.39□□□□□ -1.07
PPP4R1-216ENST00000580283 VIL1P09327 827 aaKnown RBP8.39□□□□□ -1.07
PPP4R1-216ENST00000580283 SRFP11831 508 aa8.39□□□□□ -1.07
PPP4R1-216ENST00000580283 TAF7Q15545 349 aaPredicted RBP8.39□□□□□ -1.07
PPP4R1-216ENST00000580283 ALPK1Q96QP1 1244 aa8.39□□□□□ -1.07
PPP4R1-216ENST00000580283 CRBNQ96SW2 442 aa8.39□□□□□ -1.07
PPP4R1-216ENST00000580283 THUMPD2Q9BTF0 503 aaKnown RBP8.39□□□□□ -1.07
PPP4R1-216ENST00000580283 CCSER2Q9H7U1 834 aa8.39□□□□□ -1.07
PPP4R1-216ENST00000580283 PODXL2Q9NZ53 605 aa8.39□□□□□ -1.07
PPP4R1-216ENST00000580283 SLAMF8Q9P0V8 285 aa8.39□□□□□ -1.07
PPP4R1-216ENST00000580283 PPT2Q9UMR5 302 aa8.39□□□□□ -1.07
PPP4R1-216ENST00000580283 RNF114Q9Y508 228 aa8.39□□□□□ -1.07
PPP4R1-216ENST00000580283 FKTNO75072 461 aa8.38□□□□□ -1.07
PPP4R1-216ENST00000580283 PAPLNO95428 1278 aa8.38□□□□□ -1.07
PPP4R1-216ENST00000580283 ESR1P03372 595 aa8.38□□□□□ -1.07
PPP4R1-216ENST00000580283 RPS12P25398 132 aaKnown RBP8.38□□□□□ -1.07
PPP4R1-216ENST00000580283 CC2D1BQ5T0F9 858 aaKnown RBP8.38□□□□□ -1.07
PPP4R1-216ENST00000580283 NBPF12Q5TAG4 269 aaPredicted RBP8.38□□□□□ -1.07
PPP4R1-216ENST00000580283 OTOP1Q7RTM1 612 aa8.38□□□□□ -1.07
PPP4R1-216ENST00000580283 PPP1R42Q7Z4L9 355 aa8.38□□□□□ -1.07
PPP4R1-216ENST00000580283 VWCEQ96DN2 955 aa8.38□□□□□ -1.07
PPP4R1-216ENST00000580283 GMLQ99445 158 aa8.38□□□□□ -1.07
PPP4R1-216ENST00000580283 TGIF2Q9GZN2 237 aa8.38□□□□□ -1.07
PPP4R1-216ENST00000580283 GINM1Q9NU53 330 aa8.38□□□□□ -1.07
PPP4R1-216ENST00000580283 EFR3BQ9Y2G0 817 aa8.38□□□□□ -1.07
PPP4R1-216ENST00000580283 FAM86C2PA6NEL3 165 aa8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 ECE2O60344 883 aa8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 ZNF280AP59817 542 aaPredicted RBP8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 EIF4A1P60842 406 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 EGR3Q06889 387 aa8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 NMIQ13287 307 aaPredicted RBP8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 GRAPQ13588 217 aa8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 GAB4Q2WGN9 574 aa8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 INTS3Q68E01 1043 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 GRAPLQ8TC17 118 aaPredicted RBP8.37□□□□□ -1.07
PPP4R1-216ENST00000580283 CELF1Q92879 486 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms