RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 BCAS3Q9H6U6 928 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 PXMP2Q9NR77 195 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 MYH7P12883 1935 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 ABCB11O95342 1321 aa15.41■□□□□ 0.06
CDK5RAP3-213ENST00000579605 CFBP00751 764 aa15.4■□□□□ 0.06
CDK5RAP3-213ENST00000579605 LGALS2P05162 132 aa15.4■□□□□ 0.06
CDK5RAP3-213ENST00000579605 GNAT1P11488 350 aa15.4■□□□□ 0.06
CDK5RAP3-213ENST00000579605 CDC37Q16543 378 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-213ENST00000579605 NAALADL2Q58DX5 795 aa15.4■□□□□ 0.06
CDK5RAP3-213ENST00000579605 FAM26DQ5JW98 314 aa15.4■□□□□ 0.06
CDK5RAP3-213ENST00000579605 ASTLQ6HA08 431 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-213ENST00000579605 GPKOWQ92917 476 aaPredicted RBP eCLIP15.4■□□□□ 0.06
CDK5RAP3-213ENST00000579605 CNTNAP3BQ96NU0 1288 aa15.4■□□□□ 0.06
CDK5RAP3-213ENST00000579605 NEK1Q96PY6 1258 aa15.4■□□□□ 0.06
CDK5RAP3-213ENST00000579605 CNTNAP3Q9BZ76 1288 aa15.4■□□□□ 0.06
CDK5RAP3-213ENST00000579605 ATG2AQ2TAZ0 1938 aa15.39■□□□□ 0.05
CDK5RAP3-213ENST00000579605 ORC4O43929 436 aa15.39■□□□□ 0.05
CDK5RAP3-213ENST00000579605 BRD1O95696 1058 aa15.39■□□□□ 0.05
CDK5RAP3-213ENST00000579605 HSPD1P10809 573 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP3-213ENST00000579605 HOXC8P31273 242 aa15.39■□□□□ 0.05
CDK5RAP3-213ENST00000579605 TECP42680 631 aa15.39■□□□□ 0.05
CDK5RAP3-213ENST00000579605 LPIN1Q14693 890 aa15.39■□□□□ 0.05
CDK5RAP3-213ENST00000579605 GPATCH3Q96I76 525 aa15.39■□□□□ 0.05
CDK5RAP3-213ENST00000579605 VAT1LQ9HCJ6 419 aa15.39■□□□□ 0.05
CDK5RAP3-213ENST00000579605 RALGAPA2Q2PPJ7 1873 aa15.39■□□□□ 0.05
CDK5RAP3-213ENST00000579605 FAM186AA6NE01 2351 aa15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 NOP56O00567 594 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 FOXP2O15409 715 aa15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 UBA1P22314 1058 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 GATMP50440 423 aa15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 MTMR3Q13615 1198 aa15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 SPOUT1Q5T280 376 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 UTP14CQ5TAP6 766 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 LLGL2Q6P1M3 1020 aa15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 UBALD2Q8IYN6 164 aa15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 KIAA2013Q8IYS2 634 aa15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 CMTR2Q8IYT2 770 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 FLCNQ8NFG4 579 aa15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 ATP8B4Q8TF62 1192 aa15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 DDX19BQ9UMR2 479 aa15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 SORCS3Q9UPU3 1222 aa15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 MRPL11Q9Y3B7 192 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-213ENST00000579605 DHX16O60231 1041 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-213ENST00000579605 ZMYM1Q5SVZ6 1142 aa15.37■□□□□ 0.05
CDK5RAP3-213ENST00000579605 VPS53Q5VIR6 699 aa15.37■□□□□ 0.05
CDK5RAP3-213ENST00000579605 KCNV1Q6PIU1 500 aa15.37■□□□□ 0.05
CDK5RAP3-213ENST00000579605 RUFY4Q6ZNE9 571 aa15.37■□□□□ 0.05
CDK5RAP3-213ENST00000579605 TRIM50Q86XT4 487 aa15.37■□□□□ 0.05
CDK5RAP3-213ENST00000579605 ADGRF4Q8IZF3 695 aa15.37■□□□□ 0.05
CDK5RAP3-213ENST00000579605 PDCD2LQ9BRP1 358 aa15.37■□□□□ 0.05
CDK5RAP3-213ENST00000579605 S1PR5Q9H228 398 aa15.37■□□□□ 0.05
CDK5RAP3-213ENST00000579605 CHMP4BQ9H444 224 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-213ENST00000579605 EHMT1Q9H9B1 1298 aa15.37■□□□□ 0.05
CDK5RAP3-213ENST00000579605 ZBTB40Q9NUA8 1239 aa15.37■□□□□ 0.05
CDK5RAP3-213ENST00000579605 CDH22Q9UJ99 828 aa15.37■□□□□ 0.05
CDK5RAP3-213ENST00000579605 ANAPC4Q9UJX5 808 aa15.37■□□□□ 0.05
CDK5RAP3-213ENST00000579605 SNHG28P0DPA3 235 aa15.36■□□□□ 0.05
CDK5RAP3-213ENST00000579605 ERVFC1P60507 584 aa15.36■□□□□ 0.05
CDK5RAP3-213ENST00000579605 DUSP6Q16828 381 aa15.36■□□□□ 0.05
CDK5RAP3-213ENST00000579605 QRICH1Q2TAL8 776 aa15.36■□□□□ 0.05
CDK5RAP3-213ENST00000579605 GPATCH4Q5T3I0 446 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP3-213ENST00000579605 RTN4RL1Q86UN2 441 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-213ENST00000579605 IL31RAQ8NI17 732 aa15.36■□□□□ 0.05
CDK5RAP3-213ENST00000579605 LMBR1Q8WVP7 490 aa15.36■□□□□ 0.05
CDK5RAP3-213ENST00000579605 TCP11L1Q9NUJ3 509 aa15.36■□□□□ 0.05
CDK5RAP3-213ENST00000579605 NR2E1Q9Y466 385 aa15.36■□□□□ 0.05
CDK5RAP3-213ENST00000579605 CCDC171Q6TFL3 1326 aa15.36■□□□□ 0.05
CDK5RAP3-213ENST00000579605 ASGR2P07307 311 aa15.35■□□□□ 0.05
CDK5RAP3-213ENST00000579605 SRGAP2BP0DMP2 458 aa15.35■□□□□ 0.05
CDK5RAP3-213ENST00000579605 CD52P31358 61 aa15.35■□□□□ 0.05
CDK5RAP3-213ENST00000579605 SP4Q02446 784 aa15.35■□□□□ 0.05
CDK5RAP3-213ENST00000579605 ANKRD54Q6NXT1 300 aa15.35■□□□□ 0.05
CDK5RAP3-213ENST00000579605 LINC01599Q8WXQ3 324 aa15.35■□□□□ 0.05
CDK5RAP3-213ENST00000579605 ZKSCAN3Q9BRR0 538 aa15.35■□□□□ 0.05
CDK5RAP3-213ENST00000579605 USP26Q9BXU7 913 aa15.35■□□□□ 0.05
CDK5RAP3-213ENST00000579605 MAF1Q9H063 256 aa15.35■□□□□ 0.05
CDK5RAP3-213ENST00000579605 VPS13AQ96RL7 3174 aa15.35■□□□□ 0.05
CDK5RAP3-213ENST00000579605 C2CD4DB7Z1M9 353 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 PI15O43692 258 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 FGRP09769 529 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 ARP10275 920 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 TGFB3P10600 412 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 HOXA13P31271 388 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 CLCN5P51795 746 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 ADAM17P78536 824 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 MGAT3Q09327 533 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 APOBRQ0VD83 1088 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 PGM5Q15124 567 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 FBXO47Q5MNV8 452 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 PLPP4Q5VZY2 271 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 SYCE2Q6PIF2 218 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 CYFIP1Q7L576 1253 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 VSIG10LQ86VR7 867 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 NPAS4Q8IUM7 802 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 TTC14Q96N46 770 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 AGO3Q9H9G7 860 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 TELO2Q9Y4R8 837 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 PCDHB12Q9Y5F1 795 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 CDY2AQ9Y6F7 541 aa15.34■□□□□ 0.05
CDK5RAP3-213ENST00000579605 STAG3L1P0CL83 205 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms