RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 EARS2Q5JPH6 523 aaKnown RBP11.37□□□□□ -0.59
MKS1-208ENST00000579358 ZNF746Q6NUN9 644 aaPredicted RBP11.37□□□□□ -0.59
MKS1-208ENST00000579358 SMAP1Q8IYB5 467 aaPredicted RBP11.37□□□□□ -0.59
MKS1-208ENST00000579358 INTS4Q96HW7 963 aaKnown RBP11.37□□□□□ -0.59
MKS1-208ENST00000579358 TUT1Q9H6E5 874 aaKnown RBP11.37□□□□□ -0.59
MKS1-208ENST00000579358 PRDM5Q9NQX1 630 aaPredicted RBP11.37□□□□□ -0.59
MKS1-208ENST00000579358 TMEM39AQ9NV64 488 aa11.37□□□□□ -0.59
MKS1-208ENST00000579358 DDX25Q9UHL0 483 aaKnown RBP11.37□□□□□ -0.59
MKS1-208ENST00000579358 GTF2IRD1Q9UHL9 959 aa11.37□□□□□ -0.59
MKS1-208ENST00000579358 ZMYND8Q9ULU4 1186 aaPredicted RBP11.37□□□□□ -0.59
MKS1-208ENST00000579358 TELO2Q9Y4R8 837 aa11.37□□□□□ -0.59
MKS1-208ENST00000579358 IGKV6D-21A0A0A0MT36 114 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 TRIM43BA6NCK2 446 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 FAM205CA6NFA0 338 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 TBX3O15119 743 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 CCNE2O96020 404 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 SYN1P17600 705 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 HOXC8P31273 242 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 FAM47CQ5HY64 1035 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 UTP14CQ5TAP6 766 aaKnown RBP11.36□□□□□ -0.59
MKS1-208ENST00000579358 SH3RF1Q7Z6J0 888 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 TRIM50Q86XT4 487 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 C7orf31Q8N865 590 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 ETNPPLQ8TBG4 499 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 SLC5A5Q92911 643 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 TRIM43Q96BQ3 446 aaPredicted RBP11.36□□□□□ -0.59
MKS1-208ENST00000579358 FAM20AQ96MK3 541 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 TEKT3Q9BXF9 490 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 SMARCAD1Q9H4L7 1026 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 AZI2Q9H6S1 392 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 KCNMB3Q9NPA1 279 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 ERAP1Q9NZ08 941 aa11.36□□□□□ -0.59
MKS1-208ENST00000579358 ALPK3Q96L96 1907 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 WDR64B1ANS9 1081 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 DDX39AO00148 427 aaKnown RBP11.35□□□□□ -0.59
MKS1-208ENST00000579358 SLC37A4O43826 429 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 CCNT1O60563 726 aaKnown RBP11.35□□□□□ -0.59
MKS1-208ENST00000579358 GAS7O60861 476 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 PSMD10O75832 226 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 U2AF2P26368 475 aaKnown RBP eCLIP11.35□□□□□ -0.59
MKS1-208ENST00000579358 TRAPPC10P48553 1259 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 SLC26A2P50443 739 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 ORC2Q13416 577 aaPredicted RBP11.35□□□□□ -0.59
MKS1-208ENST00000579358 GNL2Q13823 731 aaKnown RBP11.35□□□□□ -0.59
MKS1-208ENST00000579358 LRCH2Q5VUJ6 765 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 MIS18BP1Q6P0N0 1132 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 ABHD15Q6UXT9 468 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 PLPPR4Q7Z2D5 763 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 NOSTRINQ8IVI9 506 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 HSCBQ8IWL3 235 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 RDM1Q8NG50 284 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 AFAP1L1Q8TED9 768 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 GLG1Q92896 1179 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 PCYT2Q99447 389 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 GDF15Q99988 308 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 TRPV6Q9H1D0 765 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 HDAC6Q9UBN7 1215 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 SCN10AQ9Y5Y9 1956 aa11.35□□□□□ -0.59
MKS1-208ENST00000579358 TIMP1P01033 207 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 PSAPP07602 524 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 SMIM10L2AP0DMW4 78 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 SMIM10L2BP0DMW5 78 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 GNAT1P11488 350 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 RAG1P15918 1043 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 SFNP31947 248 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 BMP8BP34820 402 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 MAGEA10P43363 369 aaPredicted RBP11.34□□□□□ -0.59
MKS1-208ENST00000579358 STAT5BP51692 787 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 JAK3P52333 1124 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 CHMP4BP1P59074 171 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 RBL2Q08999 1139 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 FAM160B1Q5W0V3 765 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 GDF6Q6KF10 455 aaPredicted RBP11.34□□□□□ -0.59
MKS1-208ENST00000579358 B3GNT9Q6UX72 402 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 SLFN12Q8IYM2 578 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 TNPO1Q92973 898 aaKnown RBP11.34□□□□□ -0.59
MKS1-208ENST00000579358 LBHD1Q9BQE6 289 aaPredicted RBP11.34□□□□□ -0.59
MKS1-208ENST00000579358 PRO3102Q9H379 93 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 HIPK3Q9H422 1215 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 TRMT13Q9NUP7 481 aaKnown RBP11.34□□□□□ -0.59
MKS1-208ENST00000579358 NOD1Q9Y239 953 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 PCDHA10Q9Y5I2 948 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 NRCAMQ92823 1304 aa11.34□□□□□ -0.59
MKS1-208ENST00000579358 C17orf102A2RUQ5 167 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 KIF28PB7ZC32 967 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 H3BQV1 296 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 PITPNM1O00562 1244 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 NEMFO60524 1076 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 PDCP20941 246 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 ITGB8P26012 769 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 PTK7Q13308 1070 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 PPP2R5CQ13362 524 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 BFSP2Q13515 415 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 PTGISQ16647 500 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 POTEDQ86YR6 584 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 CCDC60Q8IWA6 550 aaPredicted RBP11.33□□□□□ -0.6
MKS1-208ENST00000579358 CCDC155Q8N6L0 562 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 CAGE1Q8TC20 777 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 CTAGE1Q96RT6 745 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 NOC4LQ9BVI4 516 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms