RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 USP11P51784 963 aa27.2■■□□□ 1.94
LIMD2-207ENST00000579329 ITGB3BPQ13352 177 aaPredicted RBP27.2■■□□□ 1.94
LIMD2-207ENST00000579329 TRIM50Q86XT4 487 aa27.2■■□□□ 1.94
LIMD2-207ENST00000579329 IL27Q8NEV9 243 aa27.2■■□□□ 1.94
LIMD2-207ENST00000579329 SH2B1Q9NRF2 756 aaPredicted RBP27.2■■□□□ 1.94
LIMD2-207ENST00000579329 UMODL1Q5DID0 1318 aa27.19■■□□□ 1.94
LIMD2-207ENST00000579329 GSTTP1A0A1W2PQM5 241 aa27.19■■□□□ 1.94
LIMD2-207ENST00000579329 KRT25Q7Z3Z0 450 aa27.19■■□□□ 1.94
LIMD2-207ENST00000579329 CCDC83Q8IWF9 413 aa27.19■■□□□ 1.94
LIMD2-207ENST00000579329 TBCKQ8TEA7 893 aa27.19■■□□□ 1.94
LIMD2-207ENST00000579329 JAK2O60674 1132 aa27.18■■□□□ 1.94
LIMD2-207ENST00000579329 CSF2RAP15509 400 aa27.18■■□□□ 1.94
LIMD2-207ENST00000579329 EPHB4P54760 987 aa27.18■■□□□ 1.94
LIMD2-207ENST00000579329 NONOQ15233 471 aaKnown RBP eCLIP27.18■■□□□ 1.94
LIMD2-207ENST00000579329 PRR16Q569H4 304 aa27.18■■□□□ 1.94
LIMD2-207ENST00000579329 CCDC155Q8N6L0 562 aa27.18■■□□□ 1.94
LIMD2-207ENST00000579329 TBC1D32Q96NH3 1257 aa27.18■■□□□ 1.94
LIMD2-207ENST00000579329 GJB4Q9NTQ9 266 aa27.18■■□□□ 1.94
LIMD2-207ENST00000579329 ST18O60284 1047 aa27.17■■□□□ 1.94
LIMD2-207ENST00000579329 SMIM10L2AP0DMW4 78 aa27.17■■□□□ 1.94
LIMD2-207ENST00000579329 SMIM10L2BP0DMW5 78 aa27.17■■□□□ 1.94
LIMD2-207ENST00000579329 CCL23P55773 120 aa27.17■■□□□ 1.94
LIMD2-207ENST00000579329 BFSP2Q13515 415 aa27.17■■□□□ 1.94
LIMD2-207ENST00000579329 SHHQ15465 462 aa27.17■■□□□ 1.94
LIMD2-207ENST00000579329 C9orf50Q5SZB4 431 aa27.17■■□□□ 1.94
LIMD2-207ENST00000579329 CTAGE1Q96RT6 745 aa27.17■■□□□ 1.94
LIMD2-207ENST00000579329 ZNF577Q9BSK1 485 aa27.17■■□□□ 1.94
LIMD2-207ENST00000579329 WNT8AQ9H1J5 351 aa27.17■■□□□ 1.94
LIMD2-207ENST00000579329 EMSYQ7Z589 1322 aa27.16■■□□□ 1.94
LIMD2-207ENST00000579329 C17orf102A2RUQ5 167 aa27.16■■□□□ 1.94
LIMD2-207ENST00000579329 IPO5O00410 1097 aaKnown RBP27.16■■□□□ 1.94
LIMD2-207ENST00000579329 PITPNM1O00562 1244 aa27.16■■□□□ 1.94
LIMD2-207ENST00000579329 ACTR2P61160 394 aa27.16■■□□□ 1.94
LIMD2-207ENST00000579329 RETREG2Q8NC44 543 aa27.16■■□□□ 1.94
LIMD2-207ENST00000579329 CAGE1Q8TC20 777 aa27.16■■□□□ 1.94
LIMD2-207ENST00000579329 LLPHQ9BRT6 129 aaKnown RBP27.16■■□□□ 1.94
LIMD2-207ENST00000579329 SMARCAD1Q9H4L7 1026 aa27.16■■□□□ 1.94
LIMD2-207ENST00000579329 BRMS1Q9HCU9 246 aa27.16■■□□□ 1.94
LIMD2-207ENST00000579329 CCDC194A0A1B0GVG4 234 aa27.15■■□□□ 1.94
LIMD2-207ENST00000579329 DDX39AO00148 427 aaKnown RBP27.15■■□□□ 1.94
LIMD2-207ENST00000579329 EDIL3O43854 480 aa27.15■■□□□ 1.94
LIMD2-207ENST00000579329 GLG1Q92896 1179 aa27.15■■□□□ 1.94
LIMD2-207ENST00000579329 LENG9Q96B70 501 aa27.15■■□□□ 1.94
LIMD2-207ENST00000579329 GUCD1Q96NT3 240 aa27.15■■□□□ 1.94
LIMD2-207ENST00000579329 IL23AQ9NPF7 189 aa27.15■■□□□ 1.94
LIMD2-207ENST00000579329 TBC1D22BQ9NU19 505 aa27.15■■□□□ 1.94
LIMD2-207ENST00000579329 ERAP1Q9NZ08 941 aa27.15■■□□□ 1.94
LIMD2-207ENST00000579329 LGR5O75473 907 aa27.14■■□□□ 1.94
LIMD2-207ENST00000579329 HOXC8P31273 242 aa27.14■■□□□ 1.94
LIMD2-207ENST00000579329 PTK7Q13308 1070 aa27.14■■□□□ 1.94
LIMD2-207ENST00000579329 TRIM29Q14134 588 aa27.14■■□□□ 1.94
LIMD2-207ENST00000579329 PSRC1Q6PGN9 363 aaPredicted RBP27.14■■□□□ 1.94
LIMD2-207ENST00000579329 MOXD1Q6UVY6 613 aa27.14■■□□□ 1.94
LIMD2-207ENST00000579329 COL25A1Q9BXS0 654 aaPredicted RBP27.14■■□□□ 1.94
LIMD2-207ENST00000579329 AZI2Q9H6S1 392 aa27.14■■□□□ 1.94
LIMD2-207ENST00000579329 TCEAL9Q9UHQ7 104 aa27.14■■□□□ 1.94
LIMD2-207ENST00000579329 DHX15O43143 795 aaKnown RBP27.13■■□□□ 1.93
LIMD2-207ENST00000579329 GNAT1P11488 350 aa27.13■■□□□ 1.93
LIMD2-207ENST00000579329 KRT2P35908 639 aa27.13■■□□□ 1.93
LIMD2-207ENST00000579329 ZNF200P98182 395 aaPredicted RBP27.13■■□□□ 1.93
LIMD2-207ENST00000579329 RBL2Q08999 1139 aa27.13■■□□□ 1.93
LIMD2-207ENST00000579329 HIC1Q14526 733 aa27.13■■□□□ 1.93
LIMD2-207ENST00000579329 INF2Q27J81 1249 aa27.13■■□□□ 1.93
LIMD2-207ENST00000579329 OXER1Q8TDS5 423 aa27.13■■□□□ 1.93
LIMD2-207ENST00000579329 AFAP1L1Q8TED9 768 aa27.13■■□□□ 1.93
LIMD2-207ENST00000579329 DHX38Q92620 1227 aaKnown RBP27.13■■□□□ 1.93
LIMD2-207ENST00000579329 SCLYQ96I15 445 aa27.13■■□□□ 1.93
LIMD2-207ENST00000579329 RNPC3Q96LT9 517 aaKnown RBP27.13■■□□□ 1.93
LIMD2-207ENST00000579329 RNPEPQ9H4A4 650 aa27.13■■□□□ 1.93
LIMD2-207ENST00000579329 ATG7O95352 703 aa27.12■■□□□ 1.93
LIMD2-207ENST00000579329 CCNE2O96020 404 aa27.12■■□□□ 1.93
LIMD2-207ENST00000579329 Q4G0T1 1027 aa27.12■■□□□ 1.93
LIMD2-207ENST00000579329 RPUSD2Q8IZ73 545 aaKnown RBP27.12■■□□□ 1.93
LIMD2-207ENST00000579329 ATP6V0A1Q93050 837 aa27.12■■□□□ 1.93
LIMD2-207ENST00000579329 FAM161BQ96MY7 647 aa27.12■■□□□ 1.93
LIMD2-207ENST00000579329 UIMC1Q96RL1 719 aa27.12■■□□□ 1.93
LIMD2-207ENST00000579329 PCYT2Q99447 389 aa27.12■■□□□ 1.93
LIMD2-207ENST00000579329 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.12■■□□□ 1.93
LIMD2-207ENST00000579329 BACH2Q9BYV9 841 aa27.12■■□□□ 1.93
LIMD2-207ENST00000579329 TANC1Q9C0D5 1861 aa27.11■■□□□ 1.93
LIMD2-207ENST00000579329 CYP3A7-CYP3A51PA0A087WV96 503 aa27.11■■□□□ 1.93
LIMD2-207ENST00000579329 TDP2O95551 362 aa27.11■■□□□ 1.93
LIMD2-207ENST00000579329 MMP1P03956 469 aa27.11■■□□□ 1.93
LIMD2-207ENST00000579329 ACRP10323 421 aa27.11■■□□□ 1.93
LIMD2-207ENST00000579329 CYP3A7P24462 503 aa27.11■■□□□ 1.93
LIMD2-207ENST00000579329 MARK3P27448 753 aa27.11■■□□□ 1.93
LIMD2-207ENST00000579329 RFC2P35250 354 aa27.11■■□□□ 1.93
LIMD2-207ENST00000579329 HMGN5P82970 282 aaKnown RBP27.11■■□□□ 1.93
LIMD2-207ENST00000579329 TMEM240Q5SV17 173 aa27.11■■□□□ 1.93
LIMD2-207ENST00000579329 FAM109BQ6ICB4 259 aaPredicted RBP27.11■■□□□ 1.93
LIMD2-207ENST00000579329 C16orf59Q7L2K0 433 aa27.11■■□□□ 1.93
LIMD2-207ENST00000579329 SETD4Q9NVD3 440 aa27.11■■□□□ 1.93
LIMD2-207ENST00000579329 MSH4O15457 936 aa27.1■■□□□ 1.93
LIMD2-207ENST00000579329 PFKMP08237 780 aa27.1■■□□□ 1.93
LIMD2-207ENST00000579329 IQCF3P0C7M6 154 aa27.1■■□□□ 1.93
LIMD2-207ENST00000579329 FOSBP53539 338 aa27.1■■□□□ 1.93
LIMD2-207ENST00000579329 KRT76Q01546 638 aa27.1■■□□□ 1.93
LIMD2-207ENST00000579329 KRT40Q6A162 431 aa27.1■■□□□ 1.93
LIMD2-207ENST00000579329 ZNF746Q6NUN9 644 aaPredicted RBP27.1■■□□□ 1.93
LIMD2-207ENST00000579329 MIS18BP1Q6P0N0 1132 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms