RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 FOXK2Q01167 660 aa10.59□□□□□ -0.71
PTPRM-210ENST00000578916 PGM5Q15124 567 aa10.59□□□□□ -0.71
PTPRM-210ENST00000578916 STOX1Q6ZVD7 989 aa10.59□□□□□ -0.71
PTPRM-210ENST00000578916 GPKOWQ92917 476 aaPredicted RBP eCLIP10.59□□□□□ -0.71
PTPRM-210ENST00000578916 ZFP91Q96JP5 570 aaPredicted RBP10.59□□□□□ -0.71
PTPRM-210ENST00000578916 USP26Q9BXU7 913 aa10.59□□□□□ -0.71
PTPRM-210ENST00000578916 PLAGL2Q9UPG8 496 aa10.59□□□□□ -0.71
PTPRM-210ENST00000578916 USP34Q70CQ2 3546 aa10.59□□□□□ -0.71
PTPRM-210ENST00000578916 NEDD4P46934 1319 aa10.58□□□□□ -0.71
PTPRM-210ENST00000578916 ENPP3O14638 875 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 OPLAHO14841 1288 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 CHRNA1P02708 482 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 HOXA13P31271 388 aaPredicted RBP10.58□□□□□ -0.72
PTPRM-210ENST00000578916 NT5C2P49902 561 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 VASPP50552 380 aaPredicted RBP10.58□□□□□ -0.72
PTPRM-210ENST00000578916 VCPP55072 806 aaKnown RBP10.58□□□□□ -0.72
PTPRM-210ENST00000578916 GHRHRQ02643 423 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 SIGLEC14Q08ET2 396 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 COASYQ13057 564 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 NEDD9Q14511 834 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 CBX2Q14781 532 aaPredicted RBP10.58□□□□□ -0.72
PTPRM-210ENST00000578916 GNPTABQ3T906 1256 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 NAALADL2Q58DX5 795 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 UTP14CQ5TAP6 766 aaKnown RBP10.58□□□□□ -0.72
PTPRM-210ENST00000578916 SAMD3Q8N6K7 520 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 EFHBQ8N7U6 833 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 SMRP1Q8NCR6 262 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 IL31RAQ8NI17 732 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 P2RX5Q93086 422 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 ZNF689Q96CS4 500 aaPredicted RBP10.58□□□□□ -0.72
PTPRM-210ENST00000578916 RPGRIP1Q96KN7 1286 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 PHF7Q9BWX1 381 aaPredicted RBP10.58□□□□□ -0.72
PTPRM-210ENST00000578916 RC3H2Q9HBD1 1191 aaKnown RBP10.58□□□□□ -0.72
PTPRM-210ENST00000578916 CLEC1BQ9P126 229 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 ZNF215Q9UL58 517 aaPredicted RBP10.58□□□□□ -0.72
PTPRM-210ENST00000578916 PCDHA1Q9Y5I3 950 aa10.58□□□□□ -0.72
PTPRM-210ENST00000578916 KIAA1217Q5T5P2 1943 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 GCOM1H8Y6P7 765 aaPredicted RBP10.57□□□□□ -0.72
PTPRM-210ENST00000578916 ZNF213O14771 459 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 KDM4AO75164 1064 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 DGKIO75912 1065 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 POLR2MP0CAP2 368 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 AVPR2P30518 371 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 NRIP1P48552 1158 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 NMIQ13287 307 aaPredicted RBP10.57□□□□□ -0.72
PTPRM-210ENST00000578916 CAMK1Q14012 370 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 LPIN1Q14693 890 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 METTL7BQ6UX53 244 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 CYFIP1Q7L576 1253 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 ADGRD2Q7Z7M1 963 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 RBM23Q86U06 439 aaKnown RBP10.57□□□□□ -0.72
PTPRM-210ENST00000578916 RSPH3Q86UC2 560 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 ZNF589Q86UQ0 364 aaPredicted RBP10.57□□□□□ -0.72
PTPRM-210ENST00000578916 FCHSD1Q86WN1 690 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 IFNLR1Q8IU57 520 aaPredicted RBP10.57□□□□□ -0.72
PTPRM-210ENST00000578916 SPPL3Q8TCT6 385 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 LMBR1Q8WVP7 490 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 ZSCAN10Q96SZ4 725 aaPredicted RBP10.57□□□□□ -0.72
PTPRM-210ENST00000578916 GPR20Q99678 358 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 BCAS3Q9H6U6 928 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 EHMT1Q9H9B1 1298 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 USP15Q9Y4E8 981 aaPredicted RBP10.57□□□□□ -0.72
PTPRM-210ENST00000578916 TECTAO75443 2155 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 NRCAMQ92823 1304 aa10.57□□□□□ -0.72
PTPRM-210ENST00000578916 RALGAPA2Q2PPJ7 1873 aa10.56□□□□□ -0.72
PTPRM-210ENST00000578916 B4E1Z4 1266 aa10.56□□□□□ -0.72
PTPRM-210ENST00000578916 ZBTB5O15062 677 aa10.56□□□□□ -0.72
PTPRM-210ENST00000578916 ITGB1P05556 798 aa10.56□□□□□ -0.72
PTPRM-210ENST00000578916 DNAJB1P25685 340 aa10.56□□□□□ -0.72
PTPRM-210ENST00000578916 MFAP1P55081 439 aaKnown RBP10.56□□□□□ -0.72
PTPRM-210ENST00000578916 ADAM17P78536 824 aa10.56□□□□□ -0.72
PTPRM-210ENST00000578916 TRAF1Q13077 416 aa10.56□□□□□ -0.72
PTPRM-210ENST00000578916 TAF2Q6P1X5 1199 aa10.56□□□□□ -0.72
PTPRM-210ENST00000578916 RUFY4Q6ZNE9 571 aa10.56□□□□□ -0.72
PTPRM-210ENST00000578916 TRIM50Q86XT4 487 aa10.56□□□□□ -0.72
PTPRM-210ENST00000578916 CMTR2Q8IYT2 770 aaKnown RBP10.56□□□□□ -0.72
PTPRM-210ENST00000578916 KLHL23Q8NBE8 558 aa10.56□□□□□ -0.72
PTPRM-210ENST00000578916 POF1BQ8WVV4 589 aa10.56□□□□□ -0.72
PTPRM-210ENST00000578916 BARX2Q9UMQ3 279 aaPredicted RBP10.56□□□□□ -0.72
PTPRM-210ENST00000578916 SUPT16HQ9Y5B9 1047 aaKnown RBP10.56□□□□□ -0.72
PTPRM-210ENST00000578916 MRPL42Q9Y6G3 142 aaKnown RBP10.56□□□□□ -0.72
PTPRM-210ENST00000578916 SALL3Q9BXA9 1300 aa10.56□□□□□ -0.72
PTPRM-210ENST00000578916 NLRC5Q86WI3 1866 aa10.55□□□□□ -0.72
PTPRM-210ENST00000578916 CFAP54Q96N23 3096 aa10.55□□□□□ -0.72
PTPRM-210ENST00000578916 SPATA31C2B4DYI2 1134 aa10.55□□□□□ -0.72
PTPRM-210ENST00000578916 KLRF2D3W0D1 207 aa10.55□□□□□ -0.72
PTPRM-210ENST00000578916 H0Y858 1186 aa10.55□□□□□ -0.72
PTPRM-210ENST00000578916 PPP1R11O60927 126 aaPredicted RBP10.55□□□□□ -0.72
PTPRM-210ENST00000578916 STAM2O75886 525 aa10.55□□□□□ -0.72
PTPRM-210ENST00000578916 ICAM3P32942 547 aa10.55□□□□□ -0.72
PTPRM-210ENST00000578916 SP4Q02446 784 aa10.55□□□□□ -0.72
PTPRM-210ENST00000578916 MGAT3Q09327 533 aa10.55□□□□□ -0.72
PTPRM-210ENST00000578916 PAN2Q504Q3 1202 aaKnown RBP10.55□□□□□ -0.72
PTPRM-210ENST00000578916 ANKRD45Q5TZF3 282 aa10.55□□□□□ -0.72
PTPRM-210ENST00000578916 ZBTB33Q86T24 672 aa10.55□□□□□ -0.72
PTPRM-210ENST00000578916 TICAM2Q86XR7 235 aa10.55□□□□□ -0.72
PTPRM-210ENST00000578916 HOMER1Q86YM7 354 aa10.55□□□□□ -0.72
PTPRM-210ENST00000578916 STAG2Q8N3U4 1231 aa10.55□□□□□ -0.72
PTPRM-210ENST00000578916 ENAHQ8N8S7 591 aaPredicted RBP10.55□□□□□ -0.72
PTPRM-210ENST00000578916 MICAL1Q8TDZ2 1067 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms