RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 ATP9AO75110 1047 aa15.05■□□□□ -0
SRSF1-202ENST00000578430 PLCG1P19174 1290 aa15.05■□□□□ -0
SRSF1-202ENST00000578430 LACTBP83111 547 aaPredicted RBP15.05■□□□□ -0
SRSF1-202ENST00000578430 SP3Q02447 781 aa15.05■□□□□ -0
SRSF1-202ENST00000578430 GRB10Q13322 594 aa15.05■□□□□ -0
SRSF1-202ENST00000578430 NEDD9Q14511 834 aa15.05■□□□□ -0
SRSF1-202ENST00000578430 MIER3Q7Z3K6 550 aa15.05■□□□□ -0
SRSF1-202ENST00000578430 SH3RF1Q7Z6J0 888 aa15.05■□□□□ -0
SRSF1-202ENST00000578430 SMAP1Q8IYB5 467 aaPredicted RBP15.05■□□□□ -0
SRSF1-202ENST00000578430 SCFD2Q8WU76 684 aa15.05■□□□□ -0
SRSF1-202ENST00000578430 EIF2AK1Q9BQI3 630 aaKnown RBP15.05■□□□□ -0
SRSF1-202ENST00000578430 LRRC27Q9C0I9 530 aa15.05■□□□□ -0
SRSF1-202ENST00000578430 GZF1Q9H116 711 aaPredicted RBP15.05■□□□□ -0
SRSF1-202ENST00000578430 RNF186Q9NXI6 227 aa15.05■□□□□ -0
SRSF1-202ENST00000578430 KIAA1217Q5T5P2 1943 aa15.04■□□□□ -0
SRSF1-202ENST00000578430 RBM47A0AV96 593 aaKnown RBP15.04■□□□□ -0
SRSF1-202ENST00000578430 EML1O00423 815 aa15.04■□□□□ -0
SRSF1-202ENST00000578430 AMPD3Q01432 767 aa15.04■□□□□ -0
SRSF1-202ENST00000578430 CAMK4Q16566 473 aa15.04■□□□□ -0
SRSF1-202ENST00000578430 OLFML2BQ68BL8 750 aa15.04■□□□□ -0
SRSF1-202ENST00000578430 PDXDC2PQ6P474 469 aa15.04■□□□□ -0
SRSF1-202ENST00000578430 SEPT14Q6ZU15 432 aa15.04■□□□□ -0
SRSF1-202ENST00000578430 PNMA5Q96PV4 448 aa15.04■□□□□ -0
SRSF1-202ENST00000578430 UIMC1Q96RL1 719 aa15.04■□□□□ -0
SRSF1-202ENST00000578430 APBA2Q99767 749 aa15.04■□□□□ -0
SRSF1-202ENST00000578430 HSD17B14Q9BPX1 270 aa15.04■□□□□ -0
SRSF1-202ENST00000578430 TINF2Q9BSI4 451 aa15.04■□□□□ -0
SRSF1-202ENST00000578430 ABHD16BQ9H3Z7 469 aa15.04■□□□□ -0
SRSF1-202ENST00000578430 JPH1Q9HDC5 661 aaPredicted RBP15.04■□□□□ -0
SRSF1-202ENST00000578430 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.04■□□□□ -0
SRSF1-202ENST00000578430 GJD2Q9UKL4 321 aa15.04■□□□□ -0
SRSF1-202ENST00000578430 DKC1O60832 514 aaKnown RBP eCLIP15.03■□□□□ -0
SRSF1-202ENST00000578430 P4HBP07237 508 aaKnown RBP15.03■□□□□ -0
SRSF1-202ENST00000578430 XRCC5P13010 732 aaKnown RBP15.03■□□□□ -0
SRSF1-202ENST00000578430 PSMC4P43686 418 aa15.03■□□□□ -0
SRSF1-202ENST00000578430 MDM2Q00987 491 aaPredicted RBP15.03■□□□□ -0
SRSF1-202ENST00000578430 TTLL4Q14679 1199 aa15.03■□□□□ -0
SRSF1-202ENST00000578430 POSTNQ15063 836 aa15.03■□□□□ -0
SRSF1-202ENST00000578430 ZRSR1Q15695 479 aaKnown RBP15.03■□□□□ -0
SRSF1-202ENST00000578430 NAALADL2Q58DX5 795 aa15.03■□□□□ -0
SRSF1-202ENST00000578430 CATSPER3Q86XQ3 398 aa15.03■□□□□ -0
SRSF1-202ENST00000578430 NPLOC4Q8TAT6 608 aa15.03■□□□□ -0
SRSF1-202ENST00000578430 PAGE5Q96GU1 130 aa15.03■□□□□ -0
SRSF1-202ENST00000578430 KBTBD4Q9NVX7 518 aa15.03■□□□□ -0
SRSF1-202ENST00000578430 PKD2L1Q9P0L9 805 aa15.03■□□□□ -0
SRSF1-202ENST00000578430 KIAA1468Q9P260 1216 aa15.03■□□□□ -0
SRSF1-202ENST00000578430 SLC9A2Q9UBY0 812 aa15.03■□□□□ -0
SRSF1-202ENST00000578430 MGAMO43451 1857 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 SYCE3A1L190 88 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 CHMP2AO43633 222 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 GTPBP6O43824 516 aaPredicted RBP15.02■□□□□ -0
SRSF1-202ENST00000578430 MED24O75448 989 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 TRPA1O75762 1119 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 SMC2O95347 1197 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 LYPLA2O95372 231 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 TBC1D8O95759 1140 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 GNRH1P01148 92 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 SPATA31C1P0DKV0 1188 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 UBA1P22314 1058 aaKnown RBP15.02■□□□□ -0
SRSF1-202ENST00000578430 HOXD10P28358 340 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 ARHGEF6Q15052 776 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 CCDC62Q6P9F0 684 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 SASS6Q6UVJ0 657 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 LRSAM1Q6UWE0 723 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 METTL7BQ6UX53 244 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 SV2BQ7L1I2 683 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 TRMT44Q8IYL2 757 aaKnown RBP15.02■□□□□ -0
SRSF1-202ENST00000578430 LARP4BQ92615 738 aaKnown RBP15.02■□□□□ -0
SRSF1-202ENST00000578430 RAD54LQ92698 747 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 ZSWIM4Q9H7M6 989 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 TUBE1Q9UJT0 475 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 DDX41Q9UJV9 622 aaKnown RBP15.02■□□□□ -0
SRSF1-202ENST00000578430 KIAA1024Q9UPX6 916 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 DNM3Q9UQ16 869 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 PCDHA10Q9Y5I2 948 aa15.02■□□□□ -0
SRSF1-202ENST00000578430 POTEB3A0JP26 581 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 DDX39AO00148 427 aaKnown RBP15.01□□□□□ -0.01
SRSF1-202ENST00000578430 SLITRK3O94933 977 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 SNAI1O95863 264 aaPredicted RBP15.01□□□□□ -0.01
SRSF1-202ENST00000578430 PSAPP07602 524 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 CCDC192P0DO97 292 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 XRCC6P12956 609 aaKnown RBP eCLIP15.01□□□□□ -0.01
SRSF1-202ENST00000578430 QARSP47897 775 aaKnown RBP15.01□□□□□ -0.01
SRSF1-202ENST00000578430 TAPT1Q6NXT6 567 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 MIS18BP1Q6P0N0 1132 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 POTEBQ6S5H4 581 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 EEPD1Q7L9B9 569 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 FBXO16Q8IX29 292 aaPredicted RBP15.01□□□□□ -0.01
SRSF1-202ENST00000578430 CKAP2LQ8IYA6 745 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 SPATA20Q8TB22 786 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 DYDC2Q96IM9 177 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 TRIM47Q96LD4 638 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 NACC1Q96RE7 527 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 KATNBL1Q9H079 304 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 BLOC1S4Q9NUP1 217 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 NRBP1Q9UHY1 535 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 SAMM50Q9Y512 469 aa15.01□□□□□ -0.01
SRSF1-202ENST00000578430 NKRFO15226 690 aaKnown RBP eCLIP15□□□□□ -0.01
SRSF1-202ENST00000578430 FARP2O94887 1054 aaPredicted RBP15□□□□□ -0.01
SRSF1-202ENST00000578430 ATG7O95352 703 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms