RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 MLXIPQ9HAP2 919 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 ARHGEF10LQ9HCE6 1279 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 ARHGAP20Q9P2F6 1191 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 ZNRF3Q9ULT6 936 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 PLAGL2Q9UPG8 496 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 CNTNAP1P78357 1384 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 SLC26A4O43511 780 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 RPS6KA5O75582 802 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 MOCS3O95396 460 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 HOXA7P31268 230 aaPredicted RBP12.63□□□□□ -0.39
GGA3-205ENST00000578348 KIF11P52732 1056 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 TMEM119Q4V9L6 283 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 VWA3BQ502W6 1294 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 COBLL1Q53SF7 1204 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 LRRC31Q6UY01 552 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 SNX29Q8TEQ0 813 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 MBOAT7Q96N66 472 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 PSMB7Q99436 277 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 LRRC27Q9C0I9 530 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 RASSF4Q9H2L5 321 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 NDST4Q9H3R1 872 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 PLEKHA4Q9H4M7 779 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 BLOC1S4Q9NUP1 217 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 SNX12Q9UMY4 172 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 JRKLQ9Y4A0 524 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 PCDHA13Q9Y5I0 950 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 ZC3H4Q9UPT8 1303 aaKnown RBP12.62□□□□□ -0.39
GGA3-205ENST00000578348 CYP3A7-CYP3A51PA0A087WV96 503 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 TACC1O75410 805 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 CYP3A7P24462 503 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 MMP14P50281 582 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 IKQ13123 557 aaPredicted RBP12.62□□□□□ -0.39
GGA3-205ENST00000578348 CENPPQ6IPU0 288 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 CCDC70Q6NSX1 233 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 CREG2Q8IUH2 290 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 HAS1Q92839 578 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 SH2D4AQ9H788 454 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 SIK3Q9Y2K2 1263 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 POTEMA6NI47 508 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 MYMKA6NI61 221 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 USP17L15C9J2P7 530 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 USP17L13C9JLJ4 530 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 USP17L11C9JVI0 530 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 USP17L18D6R9N7 530 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 USP17L22D6RA61 530 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 USP17L17D6RBQ6 530 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 USP17L19D6RCP7 530 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 USP17L20D6RJB6 530 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 AKR1B10O60218 316 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 MARCH6O60337 910 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 EIF4A3P38919 411 aaKnown RBP12.62□□□□□ -0.39
GGA3-205ENST00000578348 MATR3P43243 847 aaKnown RBP eCLIP12.62□□□□□ -0.39
GGA3-205ENST00000578348 MRPS25P82663 173 aaKnown RBP12.62□□□□□ -0.39
GGA3-205ENST00000578348 USP17L24Q0WX57 530 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 TRAF1Q13077 416 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 USP17L6PQ6QN14 398 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 TEX2Q8IWB9 1127 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 PLCD3Q8N3E9 789 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 LARP4BQ92615 738 aaKnown RBP12.62□□□□□ -0.39
GGA3-205ENST00000578348 RAD54LQ92698 747 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 RSPH14Q9UHP6 348 aa12.62□□□□□ -0.39
GGA3-205ENST00000578348 KDM3AQ9Y4C1 1321 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 PVALEFA0A1B0GWK0 134 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 A0A1W2PRG0 241 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 LRRC53A6NM62 1247 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 MEIS2O14770 477 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 TBC1D12O60347 775 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 FOSP01100 380 aaPredicted RBP12.61□□□□□ -0.39
GGA3-205ENST00000578348 CXCR5P32302 372 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 UNC13DQ70J99 1090 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 RRAGAQ7L523 313 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 FAM83AQ86UY5 434 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 HDAC7Q8WUI4 952 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 LRRC1Q9BTT6 524 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 EFCC1Q9HA90 598 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 ZBTB21Q9ULJ3 1066 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 TMX2Q9Y320 296 aa12.61□□□□□ -0.39
GGA3-205ENST00000578348 ZBTB12Q9Y330 459 aaPredicted RBP12.61□□□□□ -0.39
GGA3-205ENST00000578348 AGPSO00116 658 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 HNRNPH3P31942 346 aaKnown RBP12.6□□□□□ -0.39
GGA3-205ENST00000578348 TGFB2P61812 414 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 MAN2A1Q16706 1144 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 HYIQ5T013 277 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 NFRKBQ6P4R8 1299 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.6□□□□□ -0.39
GGA3-205ENST00000578348 ANKRD13CQ8N6S4 541 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 IQCDQ96DY2 449 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 GOPCQ9HD26 462 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 KCNMB3Q9NPA1 279 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 SMARCAL1Q9NZC9 954 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 FAM184BQ9ULE4 1060 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 PCDHA12Q9UN75 941 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 GOLGA6BA6NDN3 693 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 SLC7A5Q01650 507 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
GGA3-205ENST00000578348 SKIDA1Q1XH10 827 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 SLFN12Q8IYM2 578 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 SPATA4Q8NEY3 305 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 CRYGNQ8WXF5 182 aa12.6□□□□□ -0.39
GGA3-205ENST00000578348 ALS2CR12Q96Q35 445 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms