RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ANKMY2Q8IV38 441 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 CCAR1Q8IX12 1150 aaKnown RBP9.09□□□□□ -0.95
COPS3-215ENST00000578317 DNAJC5GQ8N7S2 189 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 FAM133AQ8N9E0 248 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 LINC00301Q8NCQ3 95 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 NSUN6Q8TEA1 469 aaKnown RBP9.09□□□□□ -0.95
COPS3-215ENST00000578317 CLP1Q92989 425 aaKnown RBP9.09□□□□□ -0.95
COPS3-215ENST00000578317 TAAR1Q96RJ0 339 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 RMDN3Q96TC7 470 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 EFCC1Q9HA90 598 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 CPA4Q9UI42 421 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 CEP131Q9UPN4 1083 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 DIS3Q9Y2L1 958 aaKnown RBP9.09□□□□□ -0.95
COPS3-215ENST00000578317 THSD7BQ9C0I4 1608 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 LAD1O00515 517 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 PPP6R2O75170 966 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 STAM2O75886 525 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 GRB14Q14449 540 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 PTPAQ15257 358 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 TTC38Q5R3I4 469 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 TRAF7Q6Q0C0 670 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 SLC30A10Q6XR72 485 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 PLEKHH3Q7Z736 793 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 C4orf32Q8N8J7 132 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 TMEM87AQ8NBN3 555 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 KCNG4Q8TDN1 519 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 MMP19Q99542 508 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 PDCD2LQ9BRP1 358 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 R3HDMLQ9H3Y0 253 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 PXMP2Q9NR77 195 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 RNF186Q9NXI6 227 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 SAGE1Q9NXZ1 904 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 PLA2G2EQ9NZK7 142 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 ADD3Q9UEY8 706 aaKnown RBP9.09□□□□□ -0.95
COPS3-215ENST00000578317 PCDHB6Q9Y5E3 794 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 ELP1O95163 1332 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 SLC15A5A6NIM6 579 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 B4DLN1 442 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 MEIS1O00470 390 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 MAFGO15525 162 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 HOXC6P09630 235 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 EDNRBP24530 442 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 GGCXP38435 758 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 ATP1A2P50993 1020 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 MAP2K1Q02750 393 aaPredicted RBP9.08□□□□□ -0.96
COPS3-215ENST00000578317 SF3A1Q15459 793 aaKnown RBP9.08□□□□□ -0.96
COPS3-215ENST00000578317 LETM2Q2VYF4 491 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 Q4G0T1 1027 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 ARHGEF16Q5VV41 709 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 PCNX4Q63HM2 1172 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 ARL6IP4Q66PJ3 421 aaKnown RBP9.08□□□□□ -0.96
COPS3-215ENST00000578317 NIPA1Q7RTP0 329 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 GPR142Q7Z601 462 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 MORC4Q8TE76 937 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 LEO1Q8WVC0 666 aaPredicted RBP9.08□□□□□ -0.96
COPS3-215ENST00000578317 BAP1Q92560 729 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 CLIC4Q9Y696 253 aa9.08□□□□□ -0.96
COPS3-215ENST00000578317 WNT7AO00755 349 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 TBX3O15119 743 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 CCNT1O60563 726 aaKnown RBP9.07□□□□□ -0.96
COPS3-215ENST00000578317 EIF3JO75822 258 aaKnown RBP9.07□□□□□ -0.96
COPS3-215ENST00000578317 NR3C2P08235 984 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 PRPHP41219 470 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 PGM5Q15124 567 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 ZNF792Q3KQV3 632 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 FOXD4L6Q3SYB3 417 aaPredicted RBP9.07□□□□□ -0.96
COPS3-215ENST00000578317 CEP55Q53EZ4 464 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 FOXD4L3Q6VB84 417 aaPredicted RBP9.07□□□□□ -0.96
COPS3-215ENST00000578317 MSL3Q8N5Y2 521 aaKnown RBP9.07□□□□□ -0.96
COPS3-215ENST00000578317 USP6NLQ92738 828 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 PGBD1Q96JS3 809 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 SPATA32Q96LK8 384 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 MTMR9Q96QG7 549 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 GJD2Q9UKL4 321 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 NOD1Q9Y239 953 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 CNPY2Q9Y2B0 182 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 UBIAD1Q9Y5Z9 338 aa9.07□□□□□ -0.96
COPS3-215ENST00000578317 A0A0G2JMZ2 1700 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 IGLV3-22A0A075B6J6 115 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 FAM86B1E9PN63 330 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 GOLGA6L22H0YM25 854 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 SPTLC2O15270 562 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 NEMFO60524 1076 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 COBLO75128 1261 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 TRPA1O75762 1119 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 FAM86B2P0C5J1 330 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 ATP2B1P20020 1258 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 ADORA2AP29274 412 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 CCND2P30279 289 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 MCM4P33991 863 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 MRPS9P82933 396 aaKnown RBP9.06□□□□□ -0.96
COPS3-215ENST00000578317 LACTBP83111 547 aaPredicted RBP9.06□□□□□ -0.96
COPS3-215ENST00000578317 ATP2C1P98194 919 aaPredicted RBP9.06□□□□□ -0.96
COPS3-215ENST00000578317 CNTN2Q02246 1040 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 SP3Q02447 781 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 DPYDQ12882 1025 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 STK38Q15208 465 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 ZNF174Q15697 407 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 SWI5Q1ZZU3 235 aa9.06□□□□□ -0.96
COPS3-215ENST00000578317 LINC01559Q495D7 138 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms