RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 TTC3P53804 2025 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 CEP250Q9BV73 2442 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 KIAA1671Q9BY89 1806 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 RGS20O76081 388 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 GOLGA8HP0CJ92 632 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 SNHG28P0DPA3 235 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 GHRP10912 638 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 GNAT1P11488 350 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 CDC37Q16543 378 aaPredicted RBP16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 FAM26DQ5JW98 314 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 TMEM105Q8N8V8 129 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 KLHL23Q8NBE8 558 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 POF1BQ8WVV4 589 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 SUSD6Q92537 303 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 UBA5Q9GZZ9 404 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 CPVLQ9H3G5 476 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 TLE6Q9H808 572 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 SETD4Q9NVD3 440 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 CHD6Q8TD26 2715 aa16.48■□□□□ 0.23
PPP4R1-206ENST00000577779 ENPP3O14638 875 aa16.47■□□□□ 0.23
PPP4R1-206ENST00000577779 FOXP2O15409 715 aa16.47■□□□□ 0.23
PPP4R1-206ENST00000577779 DGKIO75912 1065 aa16.47■□□□□ 0.23
PPP4R1-206ENST00000577779 LGALS2P05162 132 aa16.47■□□□□ 0.23
PPP4R1-206ENST00000577779 HSPD1P10809 573 aaKnown RBP16.47■□□□□ 0.23
PPP4R1-206ENST00000577779 MYCLP12524 364 aaPredicted RBP16.47■□□□□ 0.23
PPP4R1-206ENST00000577779 ZMYM1Q5SVZ6 1142 aa16.47■□□□□ 0.23
PPP4R1-206ENST00000577779 GPATCH4Q5T3I0 446 aaKnown RBP16.47■□□□□ 0.23
PPP4R1-206ENST00000577779 MLXIPQ9HAP2 919 aa16.47■□□□□ 0.23
PPP4R1-206ENST00000577779 TCP11L1Q9NUJ3 509 aa16.47■□□□□ 0.23
PPP4R1-206ENST00000577779 PCDHGC5Q9Y5F6 944 aa16.47■□□□□ 0.23
PPP4R1-206ENST00000577779 CCDC171Q6TFL3 1326 aa16.46■□□□□ 0.23
PPP4R1-206ENST00000577779 MED19A0JLT2 244 aaPredicted RBP16.46■□□□□ 0.23
PPP4R1-206ENST00000577779 CHRNA1P02708 482 aa16.46■□□□□ 0.23
PPP4R1-206ENST00000577779 FGRP09769 529 aa16.46■□□□□ 0.23
PPP4R1-206ENST00000577779 UBA1P22314 1058 aaKnown RBP16.46■□□□□ 0.23
PPP4R1-206ENST00000577779 RBM10P98175 930 aaKnown RBP16.46■□□□□ 0.23
PPP4R1-206ENST00000577779 SP2Q02086 613 aa16.46■□□□□ 0.23
PPP4R1-206ENST00000577779 KREMEN2Q8NCW0 462 aa16.46■□□□□ 0.23
PPP4R1-206ENST00000577779 NEK1Q96PY6 1258 aa16.46■□□□□ 0.23
PPP4R1-206ENST00000577779 DDX19BQ9UMR2 479 aa16.46■□□□□ 0.23
PPP4R1-206ENST00000577779 MRPL11Q9Y3B7 192 aaKnown RBP16.46■□□□□ 0.23
PPP4R1-206ENST00000577779 MYH6P13533 1939 aa16.45■□□□□ 0.22
PPP4R1-206ENST00000577779 PER2O15055 1255 aa16.45■□□□□ 0.22
PPP4R1-206ENST00000577779 CFBP00751 764 aa16.45■□□□□ 0.22
PPP4R1-206ENST00000577779 MS4A1P11836 297 aa16.45■□□□□ 0.22
PPP4R1-206ENST00000577779 SP100P23497 879 aaPredicted RBP16.45■□□□□ 0.22
PPP4R1-206ENST00000577779 ARHGAP4P98171 946 aa16.45■□□□□ 0.22
PPP4R1-206ENST00000577779 MTMR3Q13615 1198 aa16.45■□□□□ 0.22
PPP4R1-206ENST00000577779 UBALD2Q8IYN6 164 aa16.45■□□□□ 0.22
PPP4R1-206ENST00000577779 CMTR2Q8IYT2 770 aaKnown RBP16.45■□□□□ 0.22
PPP4R1-206ENST00000577779 MICAL1Q8TDZ2 1067 aa16.45■□□□□ 0.22
PPP4R1-206ENST00000577779 FSD2A1L4K1 749 aa16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 NOP56O00567 594 aaKnown RBP16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 PPFIA3O75145 1194 aa16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 TGFB3P10600 412 aa16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 LPIN1Q14693 890 aa16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 PAN2Q504Q3 1202 aaKnown RBP16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 ASTLQ6HA08 431 aaPredicted RBP16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 VN1R2Q8NFZ6 395 aa16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 ATP8B4Q8TF62 1192 aa16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 TTC14Q96N46 770 aa16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 PDCD2LQ9BRP1 358 aa16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 USP26Q9BXU7 913 aa16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 EHMT1Q9H9B1 1298 aa16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 MYO10Q9HD67 2058 aa16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 PLXNA4Q9HCM2 1894 aa16.44■□□□□ 0.22
PPP4R1-206ENST00000577779 CFAP47Q6ZTR5 3102 aa16.43■□□□□ 0.22
PPP4R1-206ENST00000577779 KAT6AQ92794 2004 aa16.43■□□□□ 0.22
PPP4R1-206ENST00000577779 ZFHX4Q86UP3 3567 aa16.43■□□□□ 0.22
PPP4R1-206ENST00000577779 KRT37O76014 449 aa16.43■□□□□ 0.22
PPP4R1-206ENST00000577779 VPS53Q5VIR6 699 aa16.43■□□□□ 0.22
PPP4R1-206ENST00000577779 DGLUCYQ7Z3D6 616 aa16.43■□□□□ 0.22
PPP4R1-206ENST00000577779 ADGRF4Q8IZF3 695 aa16.43■□□□□ 0.22
PPP4R1-206ENST00000577779 LMBR1Q8WVP7 490 aa16.43■□□□□ 0.22
PPP4R1-206ENST00000577779 TSHZ2Q9NRE2 1034 aa16.43■□□□□ 0.22
PPP4R1-206ENST00000577779 SORCS3Q9UPU3 1222 aa16.43■□□□□ 0.22
PPP4R1-206ENST00000577779 SUPT16HQ9Y5B9 1047 aaKnown RBP16.43■□□□□ 0.22
PPP4R1-206ENST00000577779 DHX16O60231 1041 aaKnown RBP16.42■□□□□ 0.22
PPP4R1-206ENST00000577779 BRD1O95696 1058 aa16.42■□□□□ 0.22
PPP4R1-206ENST00000577779 SRGAP2BP0DMP2 458 aa16.42■□□□□ 0.22
PPP4R1-206ENST00000577779 HSD17B4P51659 736 aa16.42■□□□□ 0.22
PPP4R1-206ENST00000577779 ADAM17P78536 824 aa16.42■□□□□ 0.22
PPP4R1-206ENST00000577779 QRICH1Q2TAL8 776 aa16.42■□□□□ 0.22
PPP4R1-206ENST00000577779 VSIG10LQ86VR7 867 aa16.42■□□□□ 0.22
PPP4R1-206ENST00000577779 GPKOWQ92917 476 aaPredicted RBP eCLIP16.42■□□□□ 0.224e-7■■□□□ 11.4
PPP4R1-206ENST00000577779 RMDN1Q96DB5 314 aa16.42■□□□□ 0.22
PPP4R1-206ENST00000577779 CDCA3Q99618 268 aaPredicted RBP16.42■□□□□ 0.22
PPP4R1-206ENST00000577779 APOL5Q9BWW9 433 aa16.42■□□□□ 0.22
PPP4R1-206ENST00000577779 MFSD1Q9H3U5 465 aa16.42■□□□□ 0.22
PPP4R1-206ENST00000577779 ZNF215Q9UL58 517 aaPredicted RBP16.42■□□□□ 0.22
PPP4R1-206ENST00000577779 NR2E1Q9Y466 385 aa16.42■□□□□ 0.22
PPP4R1-206ENST00000577779 SPTBN2O15020 2390 aa16.42■□□□□ 0.22
PPP4R1-206ENST00000577779 CHD8Q9HCK8 2581 aa16.41■□□□□ 0.22
PPP4R1-206ENST00000577779 PGM5Q15124 567 aa16.41■□□□□ 0.22
PPP4R1-206ENST00000577779 DUSP6Q16828 381 aa16.41■□□□□ 0.22
PPP4R1-206ENST00000577779 RUFY4Q6ZNE9 571 aa16.41■□□□□ 0.22
PPP4R1-206ENST00000577779 RSPH3Q86UC2 560 aa16.41■□□□□ 0.22
PPP4R1-206ENST00000577779 TRIM50Q86XT4 487 aa16.41■□□□□ 0.22
PPP4R1-206ENST00000577779 NPAS4Q8IUM7 802 aa16.41■□□□□ 0.22
PPP4R1-206ENST00000577779 IL31RAQ8NI17 732 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms