RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 GJD3Q8N144 294 aa16.34■□□□□ 0.21
SMARCD2-205ENST00000577686 PIBF1Q8WXW3 757 aa16.34■□□□□ 0.21
SMARCD2-205ENST00000577686 GPKOWQ92917 476 aaPredicted RBP eCLIP16.34■□□□□ 0.21
SMARCD2-205ENST00000577686 ZFP91Q96JP5 570 aaPredicted RBP16.34■□□□□ 0.21
SMARCD2-205ENST00000577686 C11orf84Q9BUA3 381 aaPredicted RBP16.34■□□□□ 0.21
SMARCD2-205ENST00000577686 PTPRSQ13332 1948 aa16.34■□□□□ 0.21
SMARCD2-205ENST00000577686 SPDYE3A6NKU9 549 aa16.33■□□□□ 0.2
SMARCD2-205ENST00000577686 PI4K2BG5E9Z4 385 aa16.33■□□□□ 0.2
SMARCD2-205ENST00000577686 CHMLP26374 656 aa16.33■□□□□ 0.2
SMARCD2-205ENST00000577686 CTNNB1P35222 781 aa16.33■□□□□ 0.2
SMARCD2-205ENST00000577686 PPFIA1Q13136 1202 aa16.33■□□□□ 0.2
SMARCD2-205ENST00000577686 CSPP1Q1MSJ5 1256 aa16.33■□□□□ 0.2
SMARCD2-205ENST00000577686 EP400NLQ6ZTU2 488 aa16.33■□□□□ 0.2
SMARCD2-205ENST00000577686 RPAINQ86UA6 219 aa16.33■□□□□ 0.2
SMARCD2-205ENST00000577686 FAM178BQ8IXR5 827 aa16.33■□□□□ 0.2
SMARCD2-205ENST00000577686 LMBR1Q8WVP7 490 aa16.33■□□□□ 0.2
SMARCD2-205ENST00000577686 PPP2R3CQ969Q6 453 aa16.33■□□□□ 0.2
SMARCD2-205ENST00000577686 PABPC5Q96DU9 382 aaKnown RBP16.33■□□□□ 0.2
SMARCD2-205ENST00000577686 TMEM87BQ96K49 555 aa16.33■□□□□ 0.2
SMARCD2-205ENST00000577686 ERAP1Q9NZ08 941 aa16.33■□□□□ 0.2
SMARCD2-205ENST00000577686 M0QZ92 97 aa16.32■□□□□ 0.2
SMARCD2-205ENST00000577686 MAFGO15525 162 aa16.32■□□□□ 0.2
SMARCD2-205ENST00000577686 GSPT1P15170 499 aaKnown RBP16.32■□□□□ 0.2
SMARCD2-205ENST00000577686 TCF7P36402 384 aaPredicted RBP16.32■□□□□ 0.2
SMARCD2-205ENST00000577686 TRIM50Q86XT4 487 aa16.32■□□□□ 0.2
SMARCD2-205ENST00000577686 SEPT1Q8WYJ6 367 aa16.32■□□□□ 0.2
SMARCD2-205ENST00000577686 GLG1Q92896 1179 aa16.32■□□□□ 0.2
SMARCD2-205ENST00000577686 YTHDC1Q96MU7 727 aaKnown RBP16.32■□□□□ 0.2
SMARCD2-205ENST00000577686 UPF3BQ9BZI7 483 aaKnown RBP16.32■□□□□ 0.2
SMARCD2-205ENST00000577686 IL25Q9H293 177 aa16.32■□□□□ 0.2
SMARCD2-205ENST00000577686 SMARCAD1Q9H4L7 1026 aa16.32■□□□□ 0.2
SMARCD2-205ENST00000577686 PSTPIP2Q9H939 334 aa16.32■□□□□ 0.2
SMARCD2-205ENST00000577686 PRKAG3Q9UGI9 489 aa16.32■□□□□ 0.2
SMARCD2-205ENST00000577686 MYH7BA7E2Y1 1941 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 ADGRA3Q8IWK6 1321 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 PRR33A8MZF0 331 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 SGSM2O43147 1006 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 MCM5P33992 734 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 PTH1RQ03431 593 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 SEMA3FQ13275 785 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 MTMR1Q13613 665 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 SLC35G1Q2M3R5 365 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 USP17L6PQ6QN14 398 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 FAM43BQ6ZT52 329 aaPredicted RBP16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 TEX2Q8IWB9 1127 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 MB21D2Q8IYB1 491 aaPredicted RBP16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 NEK9Q8TD19 979 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 IGDCC4Q8TDY8 1250 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 POP1Q99575 1024 aaKnown RBP16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 AZI2Q9H6S1 392 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 TUBE1Q9UJT0 475 aa16.31■□□□□ 0.2
SMARCD2-205ENST00000577686 MICAL3Q7RTP6 2002 aa16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 GRXCR2A6NFK2 248 aa16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 RRN3P2A6NIE6 340 aa16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 PRC1O43663 620 aa16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 GHRP10912 638 aa16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 ADAM17P78536 824 aa16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 GRIK4Q16099 956 aa16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 TCEAL5Q5H9L2 206 aa16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 IER5Q5VY09 327 aa16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 SYNE3Q6ZMZ3 975 aa16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 FTHL17Q9BXU8 183 aa16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 LY9Q9HBG7 655 aa16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 RNF216Q9NWF9 866 aaPredicted RBP16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 CLDND1Q9NY35 253 aa16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 RBM8AQ9Y5S9 174 aaKnown RBP16.3■□□□□ 0.2
SMARCD2-205ENST00000577686 C5orf67F2Z3F1 127 aa16.29■□□□□ 0.2
SMARCD2-205ENST00000577686 MEIS2O14770 477 aa16.29■□□□□ 0.2
SMARCD2-205ENST00000577686 IL9P15248 144 aa16.29■□□□□ 0.2
SMARCD2-205ENST00000577686 BTG3Q14201 252 aaPredicted RBP16.29■□□□□ 0.2
SMARCD2-205ENST00000577686 TSHZ1Q6ZSZ6 1077 aa16.29■□□□□ 0.2
SMARCD2-205ENST00000577686 MAP4K1Q92918 833 aa16.29■□□□□ 0.2
SMARCD2-205ENST00000577686 PLVAPQ9BX97 442 aa16.29■□□□□ 0.2
SMARCD2-205ENST00000577686 SENP2Q9HC62 589 aa16.29■□□□□ 0.2
SMARCD2-205ENST00000577686 SQORQ9Y6N5 450 aa16.29■□□□□ 0.2
SMARCD2-205ENST00000577686 H3BQ06 376 aaPredicted RBP16.28■□□□□ 0.2
SMARCD2-205ENST00000577686 STAG3L1P0CL83 205 aa16.28■□□□□ 0.2
SMARCD2-205ENST00000577686 PDE4AP27815 886 aa16.28■□□□□ 0.2
SMARCD2-205ENST00000577686 BMPR1AP36894 532 aa16.28■□□□□ 0.2
SMARCD2-205ENST00000577686 ANTXR2P58335 489 aa16.28■□□□□ 0.2
SMARCD2-205ENST00000577686 SDF4Q9BRK5 362 aa16.28■□□□□ 0.2
SMARCD2-205ENST00000577686 BCAS3Q9H6U6 928 aa16.28■□□□□ 0.2
SMARCD2-205ENST00000577686 SLC12A7Q9Y666 1083 aa16.28■□□□□ 0.2
SMARCD2-205ENST00000577686 MUC3AQ02505 3323 aa16.27■□□□□ 0.2
SMARCD2-205ENST00000577686 FAM86C2PA6NEL3 165 aa16.27■□□□□ 0.2
SMARCD2-205ENST00000577686 DCXO43602 365 aa16.27■□□□□ 0.2
SMARCD2-205ENST00000577686 CHRNA1P02708 482 aa16.27■□□□□ 0.2
SMARCD2-205ENST00000577686 KCNA2P16389 499 aa16.27■□□□□ 0.2
SMARCD2-205ENST00000577686 MARK3P27448 753 aa16.27■□□□□ 0.2
SMARCD2-205ENST00000577686 HOXD11P31277 338 aaPredicted RBP16.27■□□□□ 0.2
SMARCD2-205ENST00000577686 LIFRP42702 1097 aa16.27■□□□□ 0.2
SMARCD2-205ENST00000577686 MRPS6P82932 125 aaKnown RBP16.27■□□□□ 0.2
SMARCD2-205ENST00000577686 LPIN1Q14693 890 aa16.27■□□□□ 0.2
SMARCD2-205ENST00000577686 NAALADL2Q58DX5 795 aa16.27■□□□□ 0.2
SMARCD2-205ENST00000577686 ODR4Q5SWX8 454 aa16.27■□□□□ 0.2
SMARCD2-205ENST00000577686 UIMC1Q96RL1 719 aa16.27■□□□□ 0.2
SMARCD2-205ENST00000577686 MYL10Q9BUA6 226 aa16.27■□□□□ 0.2
SMARCD2-205ENST00000577686 JPH1Q9HDC5 661 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms