RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 CLUL1Q15846 466 aa15.44■□□□□ 0.06
COPS3-214ENST00000577246 NAALADL2Q58DX5 795 aa15.44■□□□□ 0.06
COPS3-214ENST00000577246 CWC27Q6UX04 472 aaKnown RBP15.44■□□□□ 0.06
COPS3-214ENST00000577246 RNF135Q8IUD6 432 aa15.44■□□□□ 0.06
COPS3-214ENST00000577246 EDAQ92838 391 aa15.44■□□□□ 0.06
COPS3-214ENST00000577246 GPKOWQ92917 476 aaPredicted RBP eCLIP15.44■□□□□ 0.06
COPS3-214ENST00000577246 MAD2L2Q9UI95 211 aa15.44■□□□□ 0.06
COPS3-214ENST00000577246 FRMPD4Q14CM0 1322 aa15.43■□□□□ 0.06
COPS3-214ENST00000577246 PALM3A6NDB9 673 aaPredicted RBP15.43■□□□□ 0.06
COPS3-214ENST00000577246 GHRP10912 638 aa15.43■□□□□ 0.06
COPS3-214ENST00000577246 PTPN5P54829 565 aa15.43■□□□□ 0.06
COPS3-214ENST00000577246 ADAM17P78536 824 aa15.43■□□□□ 0.06
COPS3-214ENST00000577246 TRDNQ13061 729 aa15.43■□□□□ 0.06
COPS3-214ENST00000577246 XRRA1Q6P2D8 792 aa15.43■□□□□ 0.06
COPS3-214ENST00000577246 BMP8AQ7Z5Y6 402 aa15.43■□□□□ 0.06
COPS3-214ENST00000577246 P2RX5Q93086 422 aa15.43■□□□□ 0.06
COPS3-214ENST00000577246 SENP7Q9BQF6 1050 aa15.43■□□□□ 0.06
COPS3-214ENST00000577246 LNPKQ9C0E8 428 aa15.43■□□□□ 0.06
COPS3-214ENST00000577246 IGFLR1Q9H665 355 aa15.43■□□□□ 0.06
COPS3-214ENST00000577246 RALGAPA2Q2PPJ7 1873 aa15.42■□□□□ 0.06
COPS3-214ENST00000577246 PNMA6FA0A0J9YX94 578 aa15.42■□□□□ 0.06
COPS3-214ENST00000577246 ERICH2A1L162 156 aa15.42■□□□□ 0.06
COPS3-214ENST00000577246 UTP14CQ5TAP6 766 aaKnown RBP15.42■□□□□ 0.06
COPS3-214ENST00000577246 NLRX1Q86UT6 975 aa15.42■□□□□ 0.06
COPS3-214ENST00000577246 TRIM50Q86XT4 487 aa15.42■□□□□ 0.06
COPS3-214ENST00000577246 SUGP1Q8IWZ8 645 aaKnown RBP15.42■□□□□ 0.06
COPS3-214ENST00000577246 CUL5Q93034 780 aa15.42■□□□□ 0.06
COPS3-214ENST00000577246 ZFP91Q96JP5 570 aaPredicted RBP15.42■□□□□ 0.06
COPS3-214ENST00000577246 PIGSQ96S52 555 aa15.42■□□□□ 0.06
COPS3-214ENST00000577246 OSBPL7Q9BZF2 842 aa15.42■□□□□ 0.06
COPS3-214ENST00000577246 RIOX1Q9H6W3 641 aa15.42■□□□□ 0.06
COPS3-214ENST00000577246 EHMT1Q9H9B1 1298 aa15.42■□□□□ 0.06
COPS3-214ENST00000577246 RC3H2Q9HBD1 1191 aaKnown RBP15.42■□□□□ 0.06
COPS3-214ENST00000577246 LAMA4Q16363 1823 aa15.41■□□□□ 0.06
COPS3-214ENST00000577246 FSD2A1L4K1 749 aa15.41■□□□□ 0.06
COPS3-214ENST00000577246 TBX10O75333 385 aa15.41■□□□□ 0.06
COPS3-214ENST00000577246 EYA4O95677 639 aa15.41■□□□□ 0.06
COPS3-214ENST00000577246 CHRNA1P02708 482 aa15.41■□□□□ 0.06
COPS3-214ENST00000577246 LINC00271P0C7V0 271 aa15.41■□□□□ 0.06
COPS3-214ENST00000577246 MRPS9P82933 396 aaKnown RBP15.41■□□□□ 0.06
COPS3-214ENST00000577246 DLX2Q07687 328 aaPredicted RBP15.41■□□□□ 0.06
COPS3-214ENST00000577246 ADAM15Q13444 863 aa15.41■□□□□ 0.06
COPS3-214ENST00000577246 GRM4Q14833 912 aa15.41■□□□□ 0.06
COPS3-214ENST00000577246 SEC23AQ15436 765 aa15.41■□□□□ 0.06
COPS3-214ENST00000577246 TSHZ1Q6ZSZ6 1077 aa15.41■□□□□ 0.06
COPS3-214ENST00000577246 ZNF689Q96CS4 500 aaPredicted RBP15.41■□□□□ 0.06
COPS3-214ENST00000577246 CDHR1Q96JP9 859 aa15.41■□□□□ 0.06
COPS3-214ENST00000577246 FTHL17Q9BXU8 183 aa15.41■□□□□ 0.06
COPS3-214ENST00000577246 TUBE1Q9UJT0 475 aa15.41■□□□□ 0.06
COPS3-214ENST00000577246 ENPP3O14638 875 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 DGKIO75912 1065 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 SP4Q02446 784 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 PPFIA1Q13136 1202 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 LPIN1Q14693 890 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 SART3Q15020 963 aaKnown RBP15.4■□□□□ 0.06
COPS3-214ENST00000577246 PCNX4Q63HM2 1172 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 TRIM67Q6ZTA4 783 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 CMTR2Q8IYT2 770 aaKnown RBP15.4■□□□□ 0.06
COPS3-214ENST00000577246 EFHBQ8N7U6 833 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 SMARCC2Q8TAQ2 1214 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 TNPO1Q92973 898 aaKnown RBP15.4■□□□□ 0.06
COPS3-214ENST00000577246 PBXIP1Q96AQ6 731 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 OSBPL3Q9H4L5 887 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 BCAS3Q9H6U6 928 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 ERAP1Q9NZ08 941 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 RTEL1Q9NZ71 1219 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 PLAGL2Q9UPG8 496 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 SQORQ9Y6N5 450 aa15.4■□□□□ 0.06
COPS3-214ENST00000577246 TMEM221A6NGB7 291 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 M0QZ92 97 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 M0R296 226 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 ST18O60284 1047 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 STAG3L1P0CL83 205 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 TCF7P36402 384 aaPredicted RBP15.39■□□□□ 0.05
COPS3-214ENST00000577246 MGAT3Q09327 533 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 COASYQ13057 564 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 SEMA3FQ13275 785 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 AAMPQ13685 434 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 FBXO47Q5MNV8 452 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 IER5Q5VY09 327 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 FAM43BQ6ZT52 329 aaPredicted RBP15.39■□□□□ 0.05
COPS3-214ENST00000577246 NPAS4Q8IUM7 802 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 SMRP1Q8NCR6 262 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 MSLNLQ96KJ4 702 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 SNX27Q96L92 541 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 IRF2BPLQ9H1B7 796 aa15.39■□□□□ 0.05
COPS3-214ENST00000577246 ALG13Q9NP73 1137 aaKnown RBP15.39■□□□□ 0.05
COPS3-214ENST00000577246 LINC01565O15544 149 aa15.38■□□□□ 0.05
COPS3-214ENST00000577246 CSPG5O95196 566 aa15.38■□□□□ 0.05
COPS3-214ENST00000577246 GTF2F1P35269 517 aaKnown RBP eCLIP15.38■□□□□ 0.05
COPS3-214ENST00000577246 RRP1P56182 461 aaKnown RBP15.38■□□□□ 0.05
COPS3-214ENST00000577246 GRIK4Q16099 956 aa15.38■□□□□ 0.05
COPS3-214ENST00000577246 RUFY4Q6ZNE9 571 aa15.38■□□□□ 0.05
COPS3-214ENST00000577246 SEPT1Q8WYJ6 367 aa15.38■□□□□ 0.05
COPS3-214ENST00000577246 GLG1Q92896 1179 aa15.38■□□□□ 0.05
COPS3-214ENST00000577246 GPRASP2Q96D09 838 aa15.38■□□□□ 0.05
COPS3-214ENST00000577246 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
COPS3-214ENST00000577246 CDY2AQ9Y6F7 541 aa15.38■□□□□ 0.05
COPS3-214ENST00000577246 MYH7BA7E2Y1 1941 aa15.38■□□□□ 0.05
COPS3-214ENST00000577246 MYH6P13533 1939 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms