RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 TYW1BQ6NUM6 668 aa13.87□□□□□ -0.19
PRPF8-215ENST00000576958 CYP2W1Q8TAV3 490 aa13.87□□□□□ -0.19
PRPF8-215ENST00000576958 LINC01599Q8WXQ3 324 aa13.87□□□□□ -0.19
PRPF8-215ENST00000576958 PCYT2Q99447 389 aa13.87□□□□□ -0.19
PRPF8-215ENST00000576958 LRFN3Q9BTN0 628 aa13.87□□□□□ -0.19
PRPF8-215ENST00000576958 SPZ1Q9BXG8 430 aa13.87□□□□□ -0.19
PRPF8-215ENST00000576958 SLC27A2O14975 620 aa13.86□□□□□ -0.19
PRPF8-215ENST00000576958 GTF2F1P35269 517 aaKnown RBP eCLIP13.86□□□□□ -0.19
PRPF8-215ENST00000576958 TCF7P36402 384 aaPredicted RBP13.86□□□□□ -0.19
PRPF8-215ENST00000576958 MGAT3Q09327 533 aa13.86□□□□□ -0.19
PRPF8-215ENST00000576958 AAK1Q2M2I8 961 aa13.86□□□□□ -0.19
PRPF8-215ENST00000576958 TRAPPC12Q8WVT3 735 aa13.86□□□□□ -0.19
PRPF8-215ENST00000576958 SEPT8Q92599 483 aa13.86□□□□□ -0.19
PRPF8-215ENST00000576958 TOP1MTQ969P6 601 aa13.86□□□□□ -0.19
PRPF8-215ENST00000576958 RRP36Q96EU6 259 aaKnown RBP13.86□□□□□ -0.19
PRPF8-215ENST00000576958 INSL6Q9Y581 213 aa13.86□□□□□ -0.19
PRPF8-215ENST00000576958 EMSYQ7Z589 1322 aa13.86□□□□□ -0.19
PRPF8-215ENST00000576958 DDAH1O94760 285 aa13.85□□□□□ -0.19
PRPF8-215ENST00000576958 PARNO95453 639 aaKnown RBP13.85□□□□□ -0.19
PRPF8-215ENST00000576958 IGBP1P78318 339 aa13.85□□□□□ -0.19
PRPF8-215ENST00000576958 TMEM62Q0P6H9 643 aa13.85□□□□□ -0.19
PRPF8-215ENST00000576958 NEDD9Q14511 834 aa13.85□□□□□ -0.19
PRPF8-215ENST00000576958 LPIN1Q14693 890 aa13.85□□□□□ -0.19
PRPF8-215ENST00000576958 GNPTABQ3T906 1256 aa13.85□□□□□ -0.19
PRPF8-215ENST00000576958 TCEAL5Q5H9L2 206 aa13.85□□□□□ -0.19
PRPF8-215ENST00000576958 NFXL1Q6ZNB6 911 aa13.85□□□□□ -0.19
PRPF8-215ENST00000576958 SAMD3Q8N6K7 520 aa13.85□□□□□ -0.19
PRPF8-215ENST00000576958 CTCFLQ8NI51 663 aaPredicted RBP13.85□□□□□ -0.19
PRPF8-215ENST00000576958 RUFY2Q8WXA3 655 aa13.85□□□□□ -0.19
PRPF8-215ENST00000576958 YME1L1Q96TA2 773 aa13.85□□□□□ -0.19
PRPF8-215ENST00000576958 USP26Q9BXU7 913 aa13.85□□□□□ -0.19
PRPF8-215ENST00000576958 IFIH1Q9BYX4 1025 aaKnown RBP13.85□□□□□ -0.19
PRPF8-215ENST00000576958 AGO3Q9H9G7 860 aaKnown RBP13.85□□□□□ -0.19
PRPF8-215ENST00000576958 KIAA1671Q9BY89 1806 aa13.85□□□□□ -0.19
PRPF8-215ENST00000576958 LOXHD1Q8IVV2 1947 aa13.84□□□□□ -0.19
PRPF8-215ENST00000576958 PIK3CDO00329 1044 aa13.84□□□□□ -0.19
PRPF8-215ENST00000576958 GRM6O15303 877 aa13.84□□□□□ -0.19
PRPF8-215ENST00000576958 GATMP50440 423 aa13.84□□□□□ -0.19
PRPF8-215ENST00000576958 DLX2Q07687 328 aaPredicted RBP13.84□□□□□ -0.19
PRPF8-215ENST00000576958 GPM6BQ13491 265 aa13.84□□□□□ -0.19
PRPF8-215ENST00000576958 SART3Q15020 963 aaKnown RBP13.84□□□□□ -0.19
PRPF8-215ENST00000576958 CLUL1Q15846 466 aa13.84□□□□□ -0.19
PRPF8-215ENST00000576958 FAM26DQ5JW98 314 aa13.84□□□□□ -0.19
PRPF8-215ENST00000576958 CREB3L3Q68CJ9 461 aa13.84□□□□□ -0.19
PRPF8-215ENST00000576958 TMEM192Q8IY95 271 aa13.84□□□□□ -0.19
PRPF8-215ENST00000576958 DNAJB3Q8WWF6 145 aa13.84□□□□□ -0.19
PRPF8-215ENST00000576958 TMEM260Q9NX78 707 aa13.84□□□□□ -0.19
PRPF8-215ENST00000576958 UBIAD1Q9Y5Z9 338 aa13.84□□□□□ -0.19
PRPF8-215ENST00000576958 TRIOO75962 3097 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 EFCAB14O75071 495 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 IBSPP21815 317 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-215ENST00000576958 PPFIA1Q13136 1202 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 GRIK4Q16099 956 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 LEXMQ3ZCV2 418 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 WWC2Q6AWC2 1192 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 PTCRAQ6ISU1 281 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-215ENST00000576958 EP400NLQ6ZTU2 488 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 TMTC3Q6ZXV5 915 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 HEATR3Q7Z4Q2 680 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 RTN4RL1Q86UN2 441 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-215ENST00000576958 MICU3Q86XE3 530 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 MRPL38Q96DV4 380 aaKnown RBP13.83□□□□□ -0.2
PRPF8-215ENST00000576958 ESYT1Q9BSJ8 1104 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 FAM49AQ9H0Q0 323 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-215ENST00000576958 PSTPIP2Q9H939 334 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 EHMT1Q9H9B1 1298 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 RC3H2Q9HBD1 1191 aaKnown RBP13.83□□□□□ -0.2
PRPF8-215ENST00000576958 LMCD1Q9NZU5 365 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 BRPF3Q9ULD4 1205 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 PCDHA6Q9UN73 950 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 PCDHGC5Q9Y5F6 944 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 PCDHA8Q9Y5H6 950 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 KAT6AQ92794 2004 aa13.83□□□□□ -0.2
PRPF8-215ENST00000576958 CCDC69A6NI79 296 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 H3BNC9 293 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 LINC01565O15544 149 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 ARP10275 920 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 CPA1P15085 419 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 CD52P31358 61 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 CTNNB1P35222 781 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 LTBRP36941 435 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 PLA2G5P39877 138 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 ITGB3BPQ13352 177 aaPredicted RBP13.82□□□□□ -0.2
PRPF8-215ENST00000576958 NECTIN1Q15223 517 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 ADCK5Q3MIX3 580 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 CASC1Q6TDU7 716 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 FAM178BQ8IXR5 827 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 CUL5Q93034 780 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 HCSTQ9UBK5 93 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 SEC63Q9UGP8 760 aaKnown RBP13.82□□□□□ -0.2
PRPF8-215ENST00000576958 CDY2AQ9Y6F7 541 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 CNTNAP5Q8WYK1 1306 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 RALGAPA2Q2PPJ7 1873 aa13.82□□□□□ -0.2
PRPF8-215ENST00000576958 WDFY4Q6ZS81 3184 aa13.81□□□□□ -0.2
PRPF8-215ENST00000576958 ENPP3O14638 875 aa13.81□□□□□ -0.2
PRPF8-215ENST00000576958 PPFIA3O75145 1194 aa13.81□□□□□ -0.2
PRPF8-215ENST00000576958 STAM2O75886 525 aa13.81□□□□□ -0.2
PRPF8-215ENST00000576958 INSRRP14616 1297 aa13.81□□□□□ -0.2
PRPF8-215ENST00000576958 DNAJB1P25685 340 aa13.81□□□□□ -0.2
PRPF8-215ENST00000576958 MCM5P33992 734 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms