RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 JPH1Q9HDC5 661 aaPredicted RBP15.09■□□□□ 0.01
RPAIN-216ENST00000575599 HDAC6Q9UBN7 1215 aa15.09■□□□□ 0.01
RPAIN-216ENST00000575599 H3BRB1 525 aa15.08■□□□□ 0
RPAIN-216ENST00000575599 DDX39AO00148 427 aaKnown RBP15.08■□□□□ 0
RPAIN-216ENST00000575599 HAS3O00219 553 aa15.08■□□□□ 0
RPAIN-216ENST00000575599 MEIS1O00470 390 aa15.08■□□□□ 0
RPAIN-216ENST00000575599 JAK2O60674 1132 aa15.08■□□□□ 0
RPAIN-216ENST00000575599 CYP3A4P08684 503 aa15.08■□□□□ 0
RPAIN-216ENST00000575599 TCF7P36402 384 aaPredicted RBP15.08■□□□□ 0
RPAIN-216ENST00000575599 FOSBP53539 338 aa15.08■□□□□ 0
RPAIN-216ENST00000575599 ST3GAL1Q11201 340 aa15.08■□□□□ 0
RPAIN-216ENST00000575599 GDF6Q6KF10 455 aaPredicted RBP15.08■□□□□ 0
RPAIN-216ENST00000575599 MFSD5Q6N075 450 aa15.08■□□□□ 0
RPAIN-216ENST00000575599 CCDC83Q8IWF9 413 aa15.08■□□□□ 0
RPAIN-216ENST00000575599 TMEM199Q8N511 208 aa15.08■□□□□ 0
RPAIN-216ENST00000575599 DAGLBQ8NCG7 672 aa15.08■□□□□ 0
RPAIN-216ENST00000575599 NSUN7Q8NE18 718 aaKnown RBP15.08■□□□□ 0
RPAIN-216ENST00000575599 CRYGNQ8WXF5 182 aa15.08■□□□□ 0
RPAIN-216ENST00000575599 NOC4LQ9BVI4 516 aaKnown RBP15.08■□□□□ 0
RPAIN-216ENST00000575599 TUT1Q9H6E5 874 aaKnown RBP15.08■□□□□ 0
RPAIN-216ENST00000575599 GJB4Q9NTQ9 266 aa15.08■□□□□ 0
RPAIN-216ENST00000575599 GTF2IRD1Q9UHL9 959 aa15.08■□□□□ 0
RPAIN-216ENST00000575599 IGLV3-22A0A075B6J6 115 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 ST18O60284 1047 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 FDPSP14324 419 aaKnown RBP15.07■□□□□ 0
RPAIN-216ENST00000575599 CSF2RAP15509 400 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 EPHB4P54760 987 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 CCL23P55773 120 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 SETQ01105 290 aaPredicted RBP15.07■□□□□ 0
RPAIN-216ENST00000575599 ITGB3BPQ13352 177 aaPredicted RBP15.07■□□□□ 0
RPAIN-216ENST00000575599 NPY5RQ15761 445 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 PRR16Q569H4 304 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 C9orf50Q5SZB4 431 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 GALNT17Q6IS24 598 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 NIPA1Q7RTP0 329 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 SESTD1Q86VW0 696 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 FAM177A1Q8N128 213 aaPredicted RBP15.07■□□□□ 0
RPAIN-216ENST00000575599 IL27Q8NEV9 243 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 TBCKQ8TEA7 893 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 MS4A3Q96HJ5 214 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 PHF20Q9BVI0 1012 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 SLC9A2Q9UBY0 812 aa15.07■□□□□ 0
RPAIN-216ENST00000575599 ZNF215Q9UL58 517 aaPredicted RBP15.07■□□□□ 0
RPAIN-216ENST00000575599 NFASCO94856 1347 aa15.06■□□□□ 0
RPAIN-216ENST00000575599 FXR1P51114 621 aaKnown RBP eCLIP15.06■□□□□ 0
RPAIN-216ENST00000575599 PPIGQ13427 754 aaKnown RBP eCLIP15.06■□□□□ 02e-8■■■□□ 15.8
RPAIN-216ENST00000575599 SHHQ15465 462 aa15.06■□□□□ 0
RPAIN-216ENST00000575599 SEPT1Q8WYJ6 367 aa15.06■□□□□ 0
RPAIN-216ENST00000575599 WNT8AQ9H1J5 351 aa15.06■□□□□ 0
RPAIN-216ENST00000575599 DAXXQ9UER7 740 aaPredicted RBP15.06■□□□□ 0
RPAIN-216ENST00000575599 LAMA3Q16787 3333 aa15.05■□□□□ 0
RPAIN-216ENST00000575599 GSTTP1A0A1W2PQM5 241 aa15.05■□□□□ -0
RPAIN-216ENST00000575599 M0R2N6 131 aa15.05■□□□□ -0
RPAIN-216ENST00000575599 SMIM10L2AP0DMW4 78 aa15.05■□□□□ -0
RPAIN-216ENST00000575599 SMIM10L2BP0DMW5 78 aa15.05■□□□□ -0
RPAIN-216ENST00000575599 MARK3P27448 753 aa15.05■□□□□ -0
RPAIN-216ENST00000575599 ZNF200P98182 395 aaPredicted RBP15.05■□□□□ -0
RPAIN-216ENST00000575599 GLG1Q92896 1179 aa15.05■□□□□ -0
RPAIN-216ENST00000575599 SCLYQ96I15 445 aa15.05■□□□□ -0
RPAIN-216ENST00000575599 ZSCAN31Q96LW9 406 aaPredicted RBP15.05■□□□□ -0
RPAIN-216ENST00000575599 ZNF577Q9BSK1 485 aa15.05■□□□□ -0
RPAIN-216ENST00000575599 CCDC194A0A1B0GVG4 234 aa15.04■□□□□ -0
RPAIN-216ENST00000575599 C17orf102A2RUQ5 167 aa15.04■□□□□ -0
RPAIN-216ENST00000575599 IPO5O00410 1097 aaKnown RBP15.04■□□□□ -0
RPAIN-216ENST00000575599 SOX1O00570 391 aaPredicted RBP15.04■□□□□ -0
RPAIN-216ENST00000575599 ACRP10323 421 aa15.04■□□□□ -0
RPAIN-216ENST00000575599 CIITAP33076 1130 aa15.04■□□□□ -0
RPAIN-216ENST00000575599 ACTR2P61160 394 aa15.04■□□□□ -0
RPAIN-216ENST00000575599 BFSP2Q13515 415 aa15.04■□□□□ -0
RPAIN-216ENST00000575599 BECN1Q14457 450 aa15.04■□□□□ -0
RPAIN-216ENST00000575599 HIC1Q14526 733 aa15.04■□□□□ -0
RPAIN-216ENST00000575599 NONOQ15233 471 aaKnown RBP eCLIP15.04■□□□□ -0
RPAIN-216ENST00000575599 INF2Q27J81 1249 aa15.04■□□□□ -0
RPAIN-216ENST00000575599 KRT25Q7Z3Z0 450 aa15.04■□□□□ -0
RPAIN-216ENST00000575599 OXER1Q8TDS5 423 aa15.04■□□□□ -0
RPAIN-216ENST00000575599 RNPC3Q96LT9 517 aaKnown RBP15.04■□□□□ -0
RPAIN-216ENST00000575599 CTAGE1Q96RT6 745 aa15.04■□□□□ -0
RPAIN-216ENST00000575599 SH2B1Q9NRF2 756 aaPredicted RBP15.04■□□□□ -0
RPAIN-216ENST00000575599 TANC1Q9C0D5 1861 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 EDIL3O43854 480 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 TDP2O95551 362 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 KRT2P35908 639 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 USP11P51784 963 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 TRIM29Q14134 588 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 PIK3AP1Q6ZUJ8 805 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 HSCBQ8IWL3 235 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 CCDC155Q8N6L0 562 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 RETREG2Q8NC44 543 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 LENG9Q96B70 501 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 LRCH3Q96II8 777 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 AZI2Q9H6S1 392 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 BRMS1Q9HCU9 246 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 TCEAL9Q9UHQ7 104 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 EMSYQ7Z589 1322 aa15.03■□□□□ -0
RPAIN-216ENST00000575599 CCNE2O96020 404 aa15.02■□□□□ -0
RPAIN-216ENST00000575599 LRIT3Q3SXY7 679 aa15.02■□□□□ -0
RPAIN-216ENST00000575599 CAGE1Q8TC20 777 aa15.02■□□□□ -0
RPAIN-216ENST00000575599 DHX38Q92620 1227 aaKnown RBP15.02■□□□□ -0
RPAIN-216ENST00000575599 ATP6V0A1Q93050 837 aa15.02■□□□□ -0
RPAIN-216ENST00000575599 PCYT2Q99447 389 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms