RNA–Protein interactions for RNA: ENST00000575570.1

TBC1D28-208, Transcript of TBC1 domain family member 28, human

TSL 5

Gene TBC1D28, Length 578 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TBC1D28-208	ENST00000575570	SHH	Q15465	462 aa		10.83	□□□□□ -0.68
TBC1D28-208	ENST00000575570	C9orf50	Q5SZB4	431 aa		10.83	□□□□□ -0.68
TBC1D28-208	ENST00000575570	MOXD1	Q6UVY6	613 aa		10.83	□□□□□ -0.68
TBC1D28-208	ENST00000575570	KRT25	Q7Z3Z0	450 aa		10.83	□□□□□ -0.68
TBC1D28-208	ENST00000575570	RPUSD2	Q8IZ73	545 aa	Known RBP	10.83	□□□□□ -0.68
TBC1D28-208	ENST00000575570	NECAB1	Q8N987	351 aa		10.83	□□□□□ -0.68
TBC1D28-208	ENST00000575570	NSUN7	Q8NE18	718 aa	Known RBP	10.83	□□□□□ -0.68
TBC1D28-208	ENST00000575570	LLPH	Q9BRT6	129 aa	Known RBP	10.83	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SMARCAD1	Q9H4L7	1026 aa		10.83	□□□□□ -0.68
TBC1D28-208	ENST00000575570	IL23A	Q9NPF7	189 aa		10.83	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.83	□□□□□ -0.68
TBC1D28-208	ENST00000575570	TBC1D22B	Q9NU19	505 aa		10.83	□□□□□ -0.68
TBC1D28-208	ENST00000575570	NOD1	Q9Y239	953 aa		10.83	□□□□□ -0.68
TBC1D28-208	ENST00000575570	NRCAM	Q92823	1304 aa		10.83	□□□□□ -0.68
TBC1D28-208	ENST00000575570	TET1	Q8NFU7	2136 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SCN5A	Q14524	2016 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	CYP3A7-CYP3A51P	A0A087WV96	503 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	IGKV6D-21	A0A0A0MT36	114 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	C17orf102	A2RUQ5	167 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	IPO5	O00410	1097 aa	Known RBP	10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	PFKM	P08237	780 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SMIM10L2A	P0DMW4	78 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SMIM10L2B	P0DMW5	78 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	GNAT1	P11488	350 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	CYP3A7	P24462	503 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	RFC2	P35250	354 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	ACTR2	P61160	394 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	ADAM17	P78536	824 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SP4	Q02446	784 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	ST3GAL1	Q11201	340 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	NONO	Q15233	471 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570		Q4G0T1	1027 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	TMEM240	Q5SV17	173 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	PSRC1	Q6PGN9	363 aa	Predicted RBP	10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	C16orf59	Q7L2K0	433 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	PLPPR4	Q7Z2D5	763 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SERINC5	Q86VE9	423 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	RETREG2	Q8NC44	543 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	TBCK	Q8TEA7	893 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	AFAP1L1	Q8TED9	768 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	PPP1R13L	Q8WUF5	828 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	DHX38	Q92620	1227 aa	Known RBP	10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	LENG9	Q96B70	501 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	MBOAT7	Q96N66	472 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	TBC1D32	Q96NH3	1257 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	ZNF577	Q9BSK1	485 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	RNPEP	Q9H4A4	650 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	ERAP1	Q9NZ08	941 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	KCNJ14	Q9UNX9	436 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	TELO2	Q9Y4R8	837 aa		10.82	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SOX1	O00570	391 aa	Predicted RBP	10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	IQCF3	P0C7M6	154 aa		10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SLC26A2	P50443	739 aa		10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	CCL23	P55773	120 aa		10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	CHMP4BP1	P59074	171 aa		10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	HIC1	Q14526	733 aa		10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	TRIM71	Q2Q1W2	868 aa	Known RBP	10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	PRR16	Q569H4	304 aa		10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	UTP14C	Q5TAP6	766 aa	Known RBP	10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	RASIP1	Q5U651	963 aa		10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	ABHD15	Q6UXT9	468 aa		10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	TRIM50	Q86XT4	487 aa		10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	TNPO1	Q92973	898 aa	Known RBP	10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	VWCE	Q96DN2	955 aa		10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	PCYT2	Q99447	389 aa		10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	RIT2	Q99578	217 aa		10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	AZI2	Q9H6S1	392 aa		10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	PKD2L1	Q9P0L9	805 aa		10.81	□□□□□ -0.68
TBC1D28-208	ENST00000575570	CCDC194	A0A1B0GVG4	234 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	MSH4	O15457	936 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	ST18	O60284	1047 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	JAK2	O60674	1132 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	CAND2	O75155	1236 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SLC34A2	O95436	690 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	FGB	P02675	491 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	CKB	P12277	381 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SELP	P16109	830 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	GCFC2	P16383	781 aa	Known RBP	10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	STAT5B	P51692	787 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	HMGN5	P82970	282 aa	Known RBP	10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SMAD3	P84022	425 aa	Known RBP	10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	ZNF200	P98182	395 aa	Predicted RBP	10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	KRT76	Q01546	638 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	PPP4R3A	Q6IN85	833 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	ZNF365	Q70YC5	407 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	RPAIN	Q86UA6	219 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	HERVK_113	Q902F9	699 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	GLG1	Q92896	1179 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	ATP6V0A1	Q93050	837 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SCLY	Q96I15	445 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	RNPC3	Q96LT9	517 aa	Known RBP	10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	NAP1L4	Q99733	375 aa	Known RBP	10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	BRMS1	Q9HCU9	246 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	GJB4	Q9NTQ9	266 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	SZT2	Q5T011	3432 aa		10.8	□□□□□ -0.68
TBC1D28-208	ENST00000575570	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.79	□□□□□ -0.68
TBC1D28-208	ENST00000575570	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms