RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 ENPP3O14638 875 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 STAM2O75886 525 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 CTNNB1P35222 781 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 GTF2F1P35269 517 aaKnown RBP eCLIP11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 SEMA3FQ13275 785 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 ADAM15Q13444 863 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 CAMK1Q14012 370 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 NEDD9Q14511 834 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 IFIT1BQ5T764 474 aaKnown RBP11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 CYFIP1Q7L576 1253 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 BMP8AQ7Z5Y6 402 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 RNF135Q8IUD6 432 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 LMBR1Q8WVP7 490 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 EDAQ92838 391 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 INPP4AQ96PE3 977 aaPredicted RBP11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 DSCC1Q9BVC3 393 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 KRT23Q9C075 422 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 RIOX1Q9H6W3 641 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 RWDD3Q9Y3V2 267 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 TELO2Q9Y4R8 837 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 FRMPD4Q14CM0 1322 aa11.56□□□□□ -0.56
CALCOCO2-227ENST00000575560 LINC01565O15544 149 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 TBX10O75333 385 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 EYA4O95677 639 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 MGAT3Q09327 533 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 TRAF1Q13077 416 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 SMAD4Q13485 552 aaKnown RBP11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 CLUL1Q15846 466 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 IMMTQ16891 758 aaKnown RBP11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 GNPTABQ3T906 1256 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 CWC27Q6UX04 472 aaKnown RBP11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 FCHSD1Q86WN1 690 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 TRIM50Q86XT4 487 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 CRIPAKQ8N1N5 446 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 MSLNLQ96KJ4 702 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 PIGSQ96S52 555 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 SENP7Q9BQF6 1050 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 UBAC1Q9BSL1 405 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 PLVAPQ9BX97 442 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 CNNM2Q9H8M5 875 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 SUPT16HQ9Y5B9 1047 aaKnown RBP11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 ADGRA3Q8IWK6 1321 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 NRCAMQ92823 1304 aa11.55□□□□□ -0.56
CALCOCO2-227ENST00000575560 MYH6P13533 1939 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 TECTAO75443 2155 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 STXBP3O00186 592 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 FIBPO43427 364 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 CYTH3O43739 400 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 DGKIO75912 1065 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 MMP1P03956 469 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 ARHGAP4P98171 946 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 LPIN1Q14693 890 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 CYB5R4Q7L1T6 521 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 PHOX2BQ99453 314 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 LNPKQ9C0E8 428 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 OSBPL3Q9H4L5 887 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 IGFLR1Q9H665 355 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 ALG13Q9NP73 1137 aaKnown RBP11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 RTEL1Q9NZ71 1219 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 CD207Q9UJ71 328 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 ZNF215Q9UL58 517 aaPredicted RBP11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 PLAGL2Q9UPG8 496 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 RALGAPA2Q2PPJ7 1873 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 NLRC5Q86WI3 1866 aa11.54□□□□□ -0.56
CALCOCO2-227ENST00000575560 PNMA6FA0A0J9YX94 578 aa11.53□□□□□ -0.56
CALCOCO2-227ENST00000575560 GHRP10912 638 aa11.53□□□□□ -0.56
CALCOCO2-227ENST00000575560 DNAJB1P25685 340 aa11.53□□□□□ -0.56
CALCOCO2-227ENST00000575560 BTG3Q14201 252 aaPredicted RBP11.53□□□□□ -0.56
CALCOCO2-227ENST00000575560 GRM4Q14833 912 aa11.53□□□□□ -0.56
CALCOCO2-227ENST00000575560 IER5LQ5T953 404 aa11.53□□□□□ -0.56
CALCOCO2-227ENST00000575560 UTP14CQ5TAP6 766 aaKnown RBP11.53□□□□□ -0.56
CALCOCO2-227ENST00000575560 TAF2Q6P1X5 1199 aa11.53□□□□□ -0.56
CALCOCO2-227ENST00000575560 RUFY4Q6ZNE9 571 aa11.53□□□□□ -0.56
CALCOCO2-227ENST00000575560 TRIM67Q6ZTA4 783 aa11.53□□□□□ -0.56
CALCOCO2-227ENST00000575560 HOMER1Q86YM7 354 aa11.53□□□□□ -0.56
CALCOCO2-227ENST00000575560 PRSS33Q8NF86 280 aa11.53□□□□□ -0.56
CALCOCO2-227ENST00000575560 P2RX5Q93086 422 aa11.53□□□□□ -0.56
CALCOCO2-227ENST00000575560 CLEC1BQ9P126 229 aa11.53□□□□□ -0.56
CALCOCO2-227ENST00000575560 LAMA4Q16363 1823 aa11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 MBLAC1A4D2B0 266 aaPredicted RBP11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 LOC730098B7Z3J9 87 aa11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 COASYQ13057 564 aa11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 CBX2Q14781 532 aaPredicted RBP11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 PKN1Q16512 942 aa11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 NAALADL2Q58DX5 795 aa11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 FBXO47Q5MNV8 452 aa11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 MARCH8Q5T0T0 291 aa11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 RTN4RL1Q86UN2 441 aaPredicted RBP11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 PLEKHM2Q8IWE5 1019 aa11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 SPPL3Q8TCT6 385 aa11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 SNX27Q96L92 541 aa11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 DIAPH3Q9NSV4 1193 aa11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 ATG2AQ2TAZ0 1938 aa11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 TTC3P53804 2025 aa11.52□□□□□ -0.57
CALCOCO2-227ENST00000575560 TMEM221A6NGB7 291 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 M0R296 226 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 HIP1O00291 1037 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 ATP9AO75110 1047 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 ITGB1P05556 798 aa11.51□□□□□ -0.57
CALCOCO2-227ENST00000575560 TCF7P36402 384 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms