RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 SENP7Q9BQF6 1050 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 IGFLR1Q9H665 355 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 ZSWIM5Q9P217 1185 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 MCM3APO60318 1980 aa10.42□□□□□ -0.74
SMG6-218ENST00000575454 B4E1Z4 1266 aa10.41□□□□□ -0.74
SMG6-218ENST00000575454 ENPP3O14638 875 aa10.41□□□□□ -0.74
SMG6-218ENST00000575454 ADAM17P78536 824 aa10.41□□□□□ -0.74
SMG6-218ENST00000575454 FOXK2Q01167 660 aa10.41□□□□□ -0.74
SMG6-218ENST00000575454 DLX2Q07687 328 aaPredicted RBP10.41□□□□□ -0.74
SMG6-218ENST00000575454 COASYQ13057 564 aa10.41□□□□□ -0.74
SMG6-218ENST00000575454 CYFIP1Q7L576 1253 aa10.41□□□□□ -0.74
SMG6-218ENST00000575454 FCHSD1Q86WN1 690 aa10.41□□□□□ -0.74
SMG6-218ENST00000575454 EFHBQ8N7U6 833 aa10.41□□□□□ -0.74
SMG6-218ENST00000575454 IL31RAQ8NI17 732 aa10.41□□□□□ -0.74
SMG6-218ENST00000575454 RILPL2Q969X0 211 aa10.41□□□□□ -0.74
SMG6-218ENST00000575454 FTHL17Q9BXU8 183 aa10.41□□□□□ -0.74
SMG6-218ENST00000575454 EHMT1Q9H9B1 1298 aa10.41□□□□□ -0.74
SMG6-218ENST00000575454 PLAGL2Q9UPG8 496 aa10.41□□□□□ -0.74
SMG6-218ENST00000575454 PNMA6FA0A0J9YX94 578 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 PALM3A6NDB9 673 aaPredicted RBP10.4□□□□□ -0.74
SMG6-218ENST00000575454 LOC730098B7Z3J9 87 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 HIP1O00291 1037 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 TBX10O75333 385 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 DGKIO75912 1065 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 CHRNA1P02708 482 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 LINC00271P0C7V0 271 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 GHRP10912 638 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 SDSP20132 328 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 NUBP1P53384 320 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 ZXDAP98168 799 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 CBX2Q14781 532 aaPredicted RBP10.4□□□□□ -0.74
SMG6-218ENST00000575454 NLRX1Q86UT6 975 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 CMTR2Q8IYT2 770 aaKnown RBP10.4□□□□□ -0.74
SMG6-218ENST00000575454 FBXL6Q8N531 539 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 SMRP1Q8NCR6 262 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 PRSS33Q8NF86 280 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 LMBR1Q8WVP7 490 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 TNPO1Q92973 898 aaKnown RBP10.4□□□□□ -0.74
SMG6-218ENST00000575454 ZNF689Q96CS4 500 aaPredicted RBP10.4□□□□□ -0.74
SMG6-218ENST00000575454 CDHR1Q96JP9 859 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 MSLNLQ96KJ4 702 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 DSCC1Q9BVC3 393 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 RC3H2Q9HBD1 1191 aaKnown RBP10.4□□□□□ -0.74
SMG6-218ENST00000575454 RNF216Q9NWF9 866 aaPredicted RBP10.4□□□□□ -0.74
SMG6-218ENST00000575454 COL4A6Q14031 1691 aa10.4□□□□□ -0.74
SMG6-218ENST00000575454 ZNF318Q5VUA4 2279 aa10.4□□□□□ -0.75
SMG6-218ENST00000575454 MYH4Q9Y623 1939 aa10.39□□□□□ -0.75
SMG6-218ENST00000575454 PPP1R11O60927 126 aaPredicted RBP10.39□□□□□ -0.75
SMG6-218ENST00000575454 STAG3L1P0CL83 205 aa10.39□□□□□ -0.75
SMG6-218ENST00000575454 SIGLEC14Q08ET2 396 aa10.39□□□□□ -0.75
SMG6-218ENST00000575454 PPFIA1Q13136 1202 aa10.39□□□□□ -0.75
SMG6-218ENST00000575454 HDAC1Q13547 482 aaPredicted RBP10.39□□□□□ -0.75
SMG6-218ENST00000575454 LPIN1Q14693 890 aa10.39□□□□□ -0.75
SMG6-218ENST00000575454 UTP14CQ5TAP6 766 aaKnown RBP10.39□□□□□ -0.75
SMG6-218ENST00000575454 IER5Q5VY09 327 aa10.39□□□□□ -0.75
SMG6-218ENST00000575454 TSHZ1Q6ZSZ6 1077 aa10.39□□□□□ -0.75
SMG6-218ENST00000575454 HOMER1Q86YM7 354 aa10.39□□□□□ -0.75
SMG6-218ENST00000575454 STAG2Q8N3U4 1231 aa10.39□□□□□ -0.75
SMG6-218ENST00000575454 GPKOWQ92917 476 aaPredicted RBP eCLIP10.39□□□□□ -0.75
SMG6-218ENST00000575454 PHF7Q9BWX1 381 aaPredicted RBP10.39□□□□□ -0.75
SMG6-218ENST00000575454 OSBPL7Q9BZF2 842 aa10.39□□□□□ -0.75
SMG6-218ENST00000575454 ALG13Q9NP73 1137 aaKnown RBP10.39□□□□□ -0.75
SMG6-218ENST00000575454 DIAPH3Q9NSV4 1193 aa10.39□□□□□ -0.75
SMG6-218ENST00000575454 ERAP1Q9NZ08 941 aa10.39□□□□□ -0.75
SMG6-218ENST00000575454 MAD2L2Q9UI95 211 aa10.39□□□□□ -0.75
SMG6-218ENST00000575454 SQORQ9Y6N5 450 aa10.39□□□□□ -0.75
SMG6-218ENST00000575454 FRMPD4Q14CM0 1322 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 RRN3P2A6NIE6 340 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 LINC01565O15544 149 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 SRGAP2BP0DMP2 458 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 ATF7P17544 494 aaPredicted RBP10.38□□□□□ -0.75
SMG6-218ENST00000575454 MRPS9P82933 396 aaKnown RBP10.38□□□□□ -0.75
SMG6-218ENST00000575454 UBE3AQ05086 875 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 MGAT3Q09327 533 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 TRDNQ13061 729 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 CAMK1Q14012 370 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 FBXO47Q5MNV8 452 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 IER5LQ5T953 404 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 PCNX4Q63HM2 1172 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 DIEXFQ68CQ4 756 aaKnown RBP10.38□□□□□ -0.75
SMG6-218ENST00000575454 CWC27Q6UX04 472 aaKnown RBP10.38□□□□□ -0.75
SMG6-218ENST00000575454 TRIM50Q86XT4 487 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 NPAS4Q8IUM7 802 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 SPPL3Q8TCT6 385 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 SEPT1Q8WYJ6 367 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 CUL5Q93034 780 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 PIGSQ96S52 555 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 CDCA3Q99618 268 aaPredicted RBP10.38□□□□□ -0.75
SMG6-218ENST00000575454 BCAS3Q9H6U6 928 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 RIOX1Q9H6W3 641 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 RTEL1Q9NZ71 1219 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 CLEC1BQ9P126 229 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 TUBE1Q9UJT0 475 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 EPG5Q9HCE0 2579 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 MYO15AQ9UKN7 3530 aa10.38□□□□□ -0.75
SMG6-218ENST00000575454 VPS13AQ96RL7 3174 aa10.37□□□□□ -0.75
SMG6-218ENST00000575454 ERICH2A1L162 156 aa10.37□□□□□ -0.75
SMG6-218ENST00000575454 MBLAC1A4D2B0 266 aaPredicted RBP10.37□□□□□ -0.75
SMG6-218ENST00000575454 M0QZ92 97 aa10.37□□□□□ -0.75
SMG6-218ENST00000575454 GFRA3O60609 400 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms