RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 CDHR1Q96JP9 859 aa12.02□□□□□ -0.49
TVP23B-208ENST00000575261 TMEM87BQ96K49 555 aa12.02□□□□□ -0.49
TVP23B-208ENST00000575261 IFIH1Q9BYX4 1025 aaKnown RBP12.02□□□□□ -0.49
TVP23B-208ENST00000575261 RAPGEFL1Q9UHV5 662 aa12.02□□□□□ -0.49
TVP23B-208ENST00000575261 NRCAMQ92823 1304 aa12.02□□□□□ -0.49
TVP23B-208ENST00000575261 CCDC69A6NI79 296 aa12.01□□□□□ -0.49
TVP23B-208ENST00000575261 RBAK-RBAKDNI3L0D1 243 aa12.01□□□□□ -0.49
TVP23B-208ENST00000575261 PRC1O43663 620 aa12.01□□□□□ -0.49
TVP23B-208ENST00000575261 PLEKHA8P1O95397 391 aa12.01□□□□□ -0.49
TVP23B-208ENST00000575261 CALM1P0DP23 149 aa12.01□□□□□ -0.49
TVP23B-208ENST00000575261 CALM2P0DP24 149 aa12.01□□□□□ -0.49
TVP23B-208ENST00000575261 CALM3P0DP25 149 aa12.01□□□□□ -0.49
TVP23B-208ENST00000575261 MCM5P33992 734 aa12.01□□□□□ -0.49
TVP23B-208ENST00000575261 TCF7P36402 384 aaPredicted RBP12.01□□□□□ -0.49
TVP23B-208ENST00000575261 ADAM17P78536 824 aa12.01□□□□□ -0.49
TVP23B-208ENST00000575261 EPC2Q52LR7 807 aa12.01□□□□□ -0.49
TVP23B-208ENST00000575261 TIGD5Q53EQ6 642 aa12.01□□□□□ -0.49
TVP23B-208ENST00000575261 TAF2Q6P1X5 1199 aa12.01□□□□□ -0.49
TVP23B-208ENST00000575261 TMTC2Q8N394 836 aa12.01□□□□□ -0.49
TVP23B-208ENST00000575261 SUPT16HQ9Y5B9 1047 aaKnown RBP12.01□□□□□ -0.49
TVP23B-208ENST00000575261 KAT6AQ92794 2004 aa12.01□□□□□ -0.49
TVP23B-208ENST00000575261 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12□□□□□ -0.49
TVP23B-208ENST00000575261 SH2B2O14492 632 aaPredicted RBP12□□□□□ -0.49
TVP23B-208ENST00000575261 UPP2O95045 317 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 KCNA2P16389 499 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 KCNA5P22460 613 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 PPFIA1Q13136 1202 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 MTMR1Q13613 665 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 LEXMQ3ZCV2 418 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 FAM26DQ5JW98 314 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 RPAINQ86UA6 219 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 RSPH3Q86UC2 560 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 SRBD1Q8N5C6 995 aaKnown RBP12□□□□□ -0.49
TVP23B-208ENST00000575261 OSBPL7Q9BZF2 842 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 PSTPIP2Q9H939 334 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 ERAP1Q9NZ08 941 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 TUBE1Q9UJT0 475 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 TELO2Q9Y4R8 837 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 C5orf42Q9H799 3197 aa12□□□□□ -0.49
TVP23B-208ENST00000575261 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.99□□□□□ -0.49
TVP23B-208ENST00000575261 SPDYE3A6NKU9 549 aa11.99□□□□□ -0.49
TVP23B-208ENST00000575261 H3BNC9 293 aa11.99□□□□□ -0.49
TVP23B-208ENST00000575261 RXRAP19793 462 aa11.99□□□□□ -0.49
TVP23B-208ENST00000575261 MARK3P27448 753 aa11.99□□□□□ -0.49
TVP23B-208ENST00000575261 PLA2G5P39877 138 aa11.99□□□□□ -0.49
TVP23B-208ENST00000575261 LIFRP42702 1097 aa11.99□□□□□ -0.49
TVP23B-208ENST00000575261 TMEM31Q5JXX7 168 aa11.99□□□□□ -0.49
TVP23B-208ENST00000575261 CMTR1Q8N1G2 835 aaKnown RBP11.99□□□□□ -0.49
TVP23B-208ENST00000575261 SEPT1Q8WYJ6 367 aa11.99□□□□□ -0.49
TVP23B-208ENST00000575261 EPHX3Q9H6B9 360 aa11.99□□□□□ -0.49
TVP23B-208ENST00000575261 EHMT1Q9H9B1 1298 aa11.99□□□□□ -0.49
TVP23B-208ENST00000575261 HCN4Q9Y3Q4 1203 aa11.99□□□□□ -0.49
TVP23B-208ENST00000575261 SLC12A7Q9Y666 1083 aa11.99□□□□□ -0.49
TVP23B-208ENST00000575261 ADGRA3Q8IWK6 1321 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 ATP9AO75110 1047 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 CHRNA1P02708 482 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 RPLP2P05387 115 aaKnown RBP11.98□□□□□ -0.49
TVP23B-208ENST00000575261 GHRP10912 638 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 ITGB5P18084 799 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 MGAT3Q09327 533 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 GPM6BQ13491 265 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 GRIK4Q16099 956 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 UBE2SQ16763 222 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 RUFY4Q6ZNE9 571 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 TMTC3Q6ZXV5 915 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 MICU3Q86XE3 530 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 TMEM192Q8IY95 271 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 BANK1Q8NDB2 785 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 GLG1Q92896 1179 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 FAM122AQ96E09 287 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 IL17RAQ96F46 866 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 LRFN3Q9BTN0 628 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 LSG1Q9H089 658 aaKnown RBP11.98□□□□□ -0.49
TVP23B-208ENST00000575261 NSUN3Q9H649 340 aaKnown RBP11.98□□□□□ -0.49
TVP23B-208ENST00000575261 UBIAD1Q9Y5Z9 338 aa11.98□□□□□ -0.49
TVP23B-208ENST00000575261 GSTTP1A0A1W2PQM5 241 aa11.97□□□□□ -0.49
TVP23B-208ENST00000575261 MBLAC1A4D2B0 266 aaPredicted RBP11.97□□□□□ -0.49
TVP23B-208ENST00000575261 SLC27A2O14975 620 aa11.97□□□□□ -0.49
TVP23B-208ENST00000575261 MAFGO15525 162 aa11.97□□□□□ -0.49
TVP23B-208ENST00000575261 CTNNB1P35222 781 aa11.97□□□□□ -0.49
TVP23B-208ENST00000575261 PUS10Q3MIT2 529 aaKnown RBP11.97□□□□□ -0.49
TVP23B-208ENST00000575261 PTCRAQ6ISU1 281 aaPredicted RBP11.97□□□□□ -0.49
TVP23B-208ENST00000575261 HEATR3Q7Z4Q2 680 aa11.97□□□□□ -0.49
TVP23B-208ENST00000575261 FAM178BQ8IXR5 827 aa11.97□□□□□ -0.49
TVP23B-208ENST00000575261 FIBCD1Q8N539 461 aa11.97□□□□□ -0.49
TVP23B-208ENST00000575261 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.97□□□□□ -0.49
TVP23B-208ENST00000575261 KHSRPQ92945 711 aaKnown RBP eCLIP11.97□□□□□ -0.49
TVP23B-208ENST00000575261 PABPC5Q96DU9 382 aaKnown RBP11.97□□□□□ -0.49
TVP23B-208ENST00000575261 SMARCAD1Q9H4L7 1026 aa11.97□□□□□ -0.49
TVP23B-208ENST00000575261 JPH1Q9HDC5 661 aaPredicted RBP11.97□□□□□ -0.49
TVP23B-208ENST00000575261 JADE2Q9NQC1 790 aa11.97□□□□□ -0.49
TVP23B-208ENST00000575261 PKD2L1Q9P0L9 805 aa11.97□□□□□ -0.49
TVP23B-208ENST00000575261 RWDD3Q9Y3V2 267 aa11.97□□□□□ -0.49
TVP23B-208ENST00000575261 ATG2AQ2TAZ0 1938 aa11.96□□□□□ -0.49
TVP23B-208ENST00000575261 hCG_1642624A0A1W2PR95 340 aa11.96□□□□□ -0.49
TVP23B-208ENST00000575261 C5orf67F2Z3F1 127 aa11.96□□□□□ -0.49
TVP23B-208ENST00000575261 RB1P06400 928 aa11.96□□□□□ -0.49
TVP23B-208ENST00000575261 IL9P15248 144 aa11.96□□□□□ -0.49
TVP23B-208ENST00000575261 IRX6P78412 446 aaPredicted RBP11.96□□□□□ -0.49
TVP23B-208ENST00000575261 LPIN1Q14693 890 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms