RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 FGD4Q96M96 766 aa6.12□□□□□ -1.43
PRPF8-211ENST00000574728 DSCC1Q9BVC3 393 aa6.12□□□□□ -1.43
PRPF8-211ENST00000574728 BRIP1Q9BX63 1249 aa6.12□□□□□ -1.43
PRPF8-211ENST00000574728 PITPNM2Q9BZ72 1349 aa6.12□□□□□ -1.43
PRPF8-211ENST00000574728 CCDC113Q9H0I3 377 aa6.12□□□□□ -1.43
PRPF8-211ENST00000574728 EPN3Q9H201 632 aa6.12□□□□□ -1.43
PRPF8-211ENST00000574728 ZSWIM4Q9H7M6 989 aa6.12□□□□□ -1.43
PRPF8-211ENST00000574728 CHST7Q9NS84 486 aa6.12□□□□□ -1.43
PRPF8-211ENST00000574728 SEMA3GQ9NS98 782 aa6.12□□□□□ -1.43
PRPF8-211ENST00000574728 FANCIQ9NVI1 1328 aa6.12□□□□□ -1.43
PRPF8-211ENST00000574728 GFOD1Q9NXC2 390 aa6.12□□□□□ -1.43
PRPF8-211ENST00000574728 ZSWIM5Q9P217 1185 aa6.12□□□□□ -1.43
PRPF8-211ENST00000574728 IBTKQ9P2D0 1353 aaPredicted RBP6.12□□□□□ -1.43
PRPF8-211ENST00000574728 SUGT1Q9Y2Z0 365 aa6.12□□□□□ -1.43
PRPF8-211ENST00000574728 LAS1LQ9Y4W2 734 aaKnown RBP6.12□□□□□ -1.43
PRPF8-211ENST00000574728 RIC1Q4ADV7 1423 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 SHISA3A0PJX4 238 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 PDPK1O15530 556 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 PRAMEF1O95521 474 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 SRGNP10124 158 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 TPP2P29144 1249 aaPredicted RBP6.11□□□□□ -1.43
PRPF8-211ENST00000574728 CD97P48960 835 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 ZNF445P59923 1031 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 RASGRF1Q13972 1273 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 CRY2Q49AN0 593 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 TSPYL5Q86VY4 417 aaPredicted RBP6.11□□□□□ -1.43
PRPF8-211ENST00000574728 FAM9BQ8IZU0 186 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 SYNE4Q8N205 404 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 NGEFQ8N5V2 710 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 ST13P5Q8NFI4 369 aaPredicted RBP6.11□□□□□ -1.43
PRPF8-211ENST00000574728 DEPDC7Q96QD5 511 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 SRPK1Q96SB4 655 aaKnown RBP6.11□□□□□ -1.43
PRPF8-211ENST00000574728 ISCA1Q9BUE6 129 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 HDAC8Q9BY41 377 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 SUSD2Q9UGT4 822 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 NIP7Q9Y221 180 aaKnown RBP eCLIP6.11□□□□□ -1.43
PRPF8-211ENST00000574728 SLC5A6Q9Y289 635 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 FHOD1Q9Y613 1164 aa6.11□□□□□ -1.43
PRPF8-211ENST00000574728 TNRC6CQ9HCJ0 1690 aaKnown RBP6.1□□□□□ -1.43
PRPF8-211ENST00000574728 KIAA1324LA8MWY0 1029 aaPredicted RBP6.1□□□□□ -1.43
PRPF8-211ENST00000574728 AGRPO00253 132 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 ELL2O00472 640 aaPredicted RBP6.1□□□□□ -1.43
PRPF8-211ENST00000574728 VAMP4O75379 141 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 SPINK2P20155 84 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 YY1P25490 414 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 CALD1Q05682 793 aaKnown RBP6.1□□□□□ -1.43
PRPF8-211ENST00000574728 IFRD2Q12894 506 aaPredicted RBP6.1□□□□□ -1.43
PRPF8-211ENST00000574728 RASA3Q14644 834 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 BMS1Q14692 1282 aaKnown RBP6.1□□□□□ -1.43
PRPF8-211ENST00000574728 SV2CQ496J9 727 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 DALRD3Q5D0E6 543 aaKnown RBP6.1□□□□□ -1.43
PRPF8-211ENST00000574728 SLC10A5Q5PT55 438 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 ZMYM1Q5SVZ6 1142 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 G2E3Q7L622 706 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 TMPRSS7Q7RTY8 843 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 VSIG10LQ86VR7 867 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 NLRP10Q86W26 655 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 DTX1Q86Y01 620 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 C2CD5Q86YS7 1000 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 TRMT2AQ8IZ69 625 aaKnown RBP6.1□□□□□ -1.43
PRPF8-211ENST00000574728 CRACR2BQ8N4Y2 399 aaPredicted RBP6.1□□□□□ -1.43
PRPF8-211ENST00000574728 ZNF655Q8N720 491 aaPredicted RBP6.1□□□□□ -1.43
PRPF8-211ENST00000574728 CNBD1Q8NA66 436 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 ADCY4Q8NFM4 1077 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 BRF1Q92994 677 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 PPP1R14AQ96A00 147 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 MRFAP1L1Q96HT8 127 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 SNTG2Q9NY99 539 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 DBF4Q9UBU7 674 aaPredicted RBP6.1□□□□□ -1.43
PRPF8-211ENST00000574728 ANGEL1Q9UNK9 670 aaKnown RBP6.1□□□□□ -1.43
PRPF8-211ENST00000574728 DIS3Q9Y2L1 958 aaKnown RBP6.1□□□□□ -1.43
PRPF8-211ENST00000574728 DLEC1Q9Y238 1755 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 COL4A1P02462 1669 aa6.1□□□□□ -1.43
PRPF8-211ENST00000574728 IQCA1LA6NCM1 817 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 NOP56O00567 594 aaKnown RBP6.09□□□□□ -1.43
PRPF8-211ENST00000574728 MED26O95402 600 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 PRNPP04156 253 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 GSNP06396 782 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 GPTP24298 496 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 EXOSC9Q06265 439 aaKnown RBP6.09□□□□□ -1.43
PRPF8-211ENST00000574728 TCIRG1Q13488 830 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 SLC10A6Q3KNW5 377 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 MTERF2Q49AM1 385 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 CWF19L1Q69YN2 538 aaKnown RBP6.09□□□□□ -1.43
PRPF8-211ENST00000574728 STYK1Q6J9G0 422 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 KIF6Q6ZMV9 814 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 NBPF5PQ86XG9 351 aaPredicted RBP6.09□□□□□ -1.43
PRPF8-211ENST00000574728 FIBCD1Q8N539 461 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 PLBD2Q8NHP8 589 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 ZNF669Q96BR6 464 aaPredicted RBP6.09□□□□□ -1.43
PRPF8-211ENST00000574728 TCTN2Q96GX1 697 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 RCC1LQ96I51 464 aaKnown RBP6.09□□□□□ -1.43
PRPF8-211ENST00000574728 NOL6Q9H6R4 1146 aaKnown RBP6.09□□□□□ -1.43
PRPF8-211ENST00000574728 ATP13A1Q9HD20 1204 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 PCMTD2Q9NV79 361 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 HYPKQ9NX55 129 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 LRP2BPQ9P2M1 347 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 CCDC39Q9UFE4 941 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 DUSP13Q9UII6 198 aa6.09□□□□□ -1.43
PRPF8-211ENST00000574728 ZNF652Q9Y2D9 606 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms