RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 PPFIA3O75145 1194 aa22.49■■□□□ 1.19
SCARF1-208ENST00000574545 CYP3A4P08684 503 aa22.49■■□□□ 1.19
SCARF1-208ENST00000574545 ATP6V0A1Q93050 837 aa22.49■■□□□ 1.19
SCARF1-208ENST00000574545 SETD4Q9NVD3 440 aa22.49■■□□□ 1.19
SCARF1-208ENST00000574545 PKD2L1Q9P0L9 805 aa22.49■■□□□ 1.19
SCARF1-208ENST00000574545 YBX2Q9Y2T7 364 aaKnown RBP22.49■■□□□ 1.19
SCARF1-208ENST00000574545 NFASCO94856 1347 aa22.49■■□□□ 1.19
SCARF1-208ENST00000574545 ZBBXA8MT70 800 aa22.48■■□□□ 1.19
SCARF1-208ENST00000574545 RBAK-RBAKDNI3L0D1 243 aa22.48■■□□□ 1.19
SCARF1-208ENST00000574545 ACTN1P12814 892 aa22.48■■□□□ 1.19
SCARF1-208ENST00000574545 ARHGAP4P98171 946 aa22.48■■□□□ 1.19
SCARF1-208ENST00000574545 ITGB3BPQ13352 177 aaPredicted RBP22.48■■□□□ 1.19
SCARF1-208ENST00000574545 RAB30Q15771 203 aa22.48■■□□□ 1.19
SCARF1-208ENST00000574545 TCTN1Q2MV58 587 aa22.48■■□□□ 1.19
SCARF1-208ENST00000574545 NIPA1Q7RTP0 329 aa22.48■■□□□ 1.19
SCARF1-208ENST00000574545 CCDC12Q8WUD4 166 aaPredicted RBP22.48■■□□□ 1.19
SCARF1-208ENST00000574545 MYLIPQ8WY64 445 aa22.48■■□□□ 1.19
SCARF1-208ENST00000574545 IL17RAQ96F46 866 aa22.48■■□□□ 1.19
SCARF1-208ENST00000574545 PCYT2Q99447 389 aa22.48■■□□□ 1.19
SCARF1-208ENST00000574545 LARP6Q9BRS8 491 aaKnown RBP22.48■■□□□ 1.19
SCARF1-208ENST00000574545 SLC26A6Q9BXS9 759 aa22.48■■□□□ 1.19
SCARF1-208ENST00000574545 FTOQ9C0B1 505 aaKnown RBP eCLIP22.48■■□□□ 1.19
SCARF1-208ENST00000574545 AGO4Q9HCK5 861 aaKnown RBP22.48■■□□□ 1.19
SCARF1-208ENST00000574545 C6orf50Q9HD87 102 aa22.48■■□□□ 1.19
SCARF1-208ENST00000574545 ZNF215Q9UL58 517 aaPredicted RBP22.48■■□□□ 1.19
SCARF1-208ENST00000574545 MYO9BQ13459 2157 aa22.48■■□□□ 1.19
SCARF1-208ENST00000574545 IGLV3-22A0A075B6J6 115 aa22.47■■□□□ 1.19
SCARF1-208ENST00000574545 FAM86B1E9PN63 330 aa22.47■■□□□ 1.19
SCARF1-208ENST00000574545 LGR5O75473 907 aa22.47■■□□□ 1.19
SCARF1-208ENST00000574545 FAM86B2P0C5J1 330 aa22.47■■□□□ 1.19
SCARF1-208ENST00000574545 ATP2A2P16615 1042 aaKnown RBP22.47■■□□□ 1.19
SCARF1-208ENST00000574545 RABGGTBP53611 331 aa22.47■■□□□ 1.19
SCARF1-208ENST00000574545 PHOSPHO2Q8TCD6 241 aa22.47■■□□□ 1.19
SCARF1-208ENST00000574545 JPH1Q9HDC5 661 aaPredicted RBP22.47■■□□□ 1.19
SCARF1-208ENST00000574545 PDRG1Q9NUG6 133 aa22.47■■□□□ 1.19
SCARF1-208ENST00000574545 MSRAQ9UJ68 235 aa22.47■■□□□ 1.19
SCARF1-208ENST00000574545 GBF1Q92538 1859 aa22.46■■□□□ 1.19
SCARF1-208ENST00000574545 EDIL3O43854 480 aa22.46■■□□□ 1.19
SCARF1-208ENST00000574545 BAIAP3O94812 1187 aa22.46■■□□□ 1.19
SCARF1-208ENST00000574545 GNA11P29992 359 aa22.46■■□□□ 1.19
SCARF1-208ENST00000574545 ANAPC15P60006 121 aa22.46■■□□□ 1.19
SCARF1-208ENST00000574545 AKAP17AQ02040 695 aaKnown RBP22.46■■□□□ 1.19
SCARF1-208ENST00000574545 MCTP2Q6DN12 878 aa22.46■■□□□ 1.19
SCARF1-208ENST00000574545 LMBR1Q8WVP7 490 aa22.46■■□□□ 1.19
SCARF1-208ENST00000574545 NKX2-4Q9H2Z4 354 aa22.46■■□□□ 1.19
SCARF1-208ENST00000574545 SLC9A2Q9UBY0 812 aa22.46■■□□□ 1.19
SCARF1-208ENST00000574545 PCDHA11Q9Y5I1 949 aa22.46■■□□□ 1.19
SCARF1-208ENST00000574545 CHD7Q9P2D1 2997 aa22.46■■□□□ 1.19
SCARF1-208ENST00000574545 A0A0C4DFX4 3053 aa22.46■■□□□ 1.19
SCARF1-208ENST00000574545 SPTBN5Q9NRC6 3674 aaKnown RBP22.45■■□□□ 1.18
SCARF1-208ENST00000574545 ATG7O95352 703 aa22.45■■□□□ 1.18
SCARF1-208ENST00000574545 GNAT1P11488 350 aa22.45■■□□□ 1.18
SCARF1-208ENST00000574545 MYOGP15173 224 aa22.45■■□□□ 1.18
SCARF1-208ENST00000574545 CNKSR3Q6P9H4 555 aa22.45■■□□□ 1.18
SCARF1-208ENST00000574545 REXO1Q8N1G1 1221 aaKnown RBP22.45■■□□□ 1.18
SCARF1-208ENST00000574545 SLC9A7Q96T83 725 aa22.45■■□□□ 1.18
SCARF1-208ENST00000574545 SMARCAD1Q9H4L7 1026 aa22.45■■□□□ 1.18
SCARF1-208ENST00000574545 SH3GLB2Q9NR46 395 aa22.45■■□□□ 1.18
SCARF1-208ENST00000574545 VPS54Q9P1Q0 977 aa22.45■■□□□ 1.18
SCARF1-208ENST00000574545 EMSYQ7Z589 1322 aa22.45■■□□□ 1.18
SCARF1-208ENST00000574545 NRCAMQ92823 1304 aa22.45■■□□□ 1.18
SCARF1-208ENST00000574545 RSPH10B2B2RC85 870 aa22.44■■□□□ 1.18
SCARF1-208ENST00000574545 DHX15O43143 795 aaKnown RBP22.44■■□□□ 1.18
SCARF1-208ENST00000574545 RSPH10BP0C881 870 aa22.44■■□□□ 1.18
SCARF1-208ENST00000574545 THPOP40225 353 aa22.44■■□□□ 1.18
SCARF1-208ENST00000574545 UNC80Q8N2C7 3258 aa22.44■■□□□ 1.18
SCARF1-208ENST00000574545 CCDC148Q8NFR7 591 aa22.44■■□□□ 1.18
SCARF1-208ENST00000574545 RASGRP4Q8TDF6 673 aa22.44■■□□□ 1.18
SCARF1-208ENST00000574545 ERAP1Q9NZ08 941 aa22.44■■□□□ 1.18
SCARF1-208ENST00000574545 CAND2O75155 1236 aa22.43■■□□□ 1.18
SCARF1-208ENST00000574545 CIITAP33076 1130 aa22.43■■□□□ 1.18
SCARF1-208ENST00000574545 ZNF76P36508 570 aa22.43■■□□□ 1.18
SCARF1-208ENST00000574545 ACTR2P61160 394 aa22.43■■□□□ 1.18
SCARF1-208ENST00000574545 WDR5P61964 334 aaKnown RBP22.43■■□□□ 1.18
SCARF1-208ENST00000574545 SSRP1Q08945 709 aaKnown RBP22.43■■□□□ 1.18
SCARF1-208ENST00000574545 MKRN4PQ13434 485 aaPredicted RBP22.43■■□□□ 1.18
SCARF1-208ENST00000574545 RPAINQ86UA6 219 aa22.43■■□□□ 1.18
SCARF1-208ENST00000574545 PLA2G4DQ86XP0 818 aa22.43■■□□□ 1.18
SCARF1-208ENST00000574545 SDF4Q9BRK5 362 aa22.43■■□□□ 1.18
SCARF1-208ENST00000574545 OSBPL7Q9BZF2 842 aa22.43■■□□□ 1.18
SCARF1-208ENST00000574545 PRUNE2Q8WUY3 3088 aa22.43■■□□□ 1.18
SCARF1-208ENST00000574545 KAT6AQ92794 2004 aa22.43■■□□□ 1.18
SCARF1-208ENST00000574545 IGKV6D-21A0A0A0MT36 114 aa22.42■■□□□ 1.18
SCARF1-208ENST00000574545 CCNE2O96020 404 aa22.42■■□□□ 1.18
SCARF1-208ENST00000574545 STK3Q13188 491 aa22.42■■□□□ 1.18
SCARF1-208ENST00000574545 FAM26DQ5JW98 314 aa22.42■■□□□ 1.18
SCARF1-208ENST00000574545 MARCH8Q5T0T0 291 aa22.42■■□□□ 1.18
SCARF1-208ENST00000574545 PLPPR4Q7Z2D5 763 aa22.42■■□□□ 1.18
SCARF1-208ENST00000574545 HERC6Q8IVU3 1022 aa22.42■■□□□ 1.18
SCARF1-208ENST00000574545 SLC17A8Q8NDX2 589 aa22.42■■□□□ 1.18
SCARF1-208ENST00000574545 BICD2Q8TD16 824 aa22.42■■□□□ 1.18
SCARF1-208ENST00000574545 GLG1Q92896 1179 aa22.42■■□□□ 1.18
SCARF1-208ENST00000574545 SLC28A3Q9HAS3 691 aa22.42■■□□□ 1.18
SCARF1-208ENST00000574545 PTPRSQ13332 1948 aa22.41■■□□□ 1.18
SCARF1-208ENST00000574545 ABHD14A-ACY1A0A1B0GW23 586 aa22.41■■□□□ 1.18
SCARF1-208ENST00000574545 MBLAC1A4D2B0 266 aaPredicted RBP22.41■■□□□ 1.18
SCARF1-208ENST00000574545 DEXIO95424 95 aa22.41■■□□□ 1.18
SCARF1-208ENST00000574545 FOSL2P15408 326 aa22.41■■□□□ 1.18
SCARF1-208ENST00000574545 MARK3P27448 753 aa22.41■■□□□ 1.18
SCARF1-208ENST00000574545 SCRN1Q12765 414 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms