RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 MAN2A1Q16706 1144 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 VWA3BQ502W6 1294 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 OTOP1Q7RTM1 612 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 SGIP1Q9BQI5 828 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 REEP2Q9BRK0 252 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 NDST4Q9H3R1 872 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 RAVER2Q9HCJ3 691 aaKnown RBP11.6□□□□□ -0.55
USP43-205ENST00000574408 AGPAT5Q9NUQ2 364 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 RABGAP1Q9Y3P9 1069 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 UTRNP46939 3433 aa11.6□□□□□ -0.55
USP43-205ENST00000574408 PSMD10O75832 226 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 ARP10275 920 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 FKBP3Q00688 224 aaKnown RBP11.59□□□□□ -0.55
USP43-205ENST00000574408 GIT2Q14161 759 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 ZCWPW2Q504Y3 356 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 TPH2Q8IWU9 490 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 SMAP1Q8IYB5 467 aaPredicted RBP11.59□□□□□ -0.55
USP43-205ENST00000574408 NLGN2Q8NFZ4 835 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 PIGOQ8TEQ8 1089 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 SCFD1Q8WVM8 642 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 SLC5A5Q92911 643 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 ERGIC2Q96RQ1 377 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 DNAJC7Q99615 494 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 NUP58Q9BVL2 599 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 IRX2Q9BZI1 471 aaPredicted RBP11.59□□□□□ -0.55
USP43-205ENST00000574408 POLD4Q9HCU8 107 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 EMILIN3Q9NT22 766 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 ATAD5Q96QE3 1844 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 FRMD3A2A2Y4 597 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 VCAM1P19320 739 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 CASQ1P31415 396 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 TNNT3P45378 269 aaPredicted RBP11.59□□□□□ -0.55
USP43-205ENST00000574408 SPP2Q13103 211 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 CCDC40Q4G0X9 1142 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 SFR1Q86XK3 245 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 DYDC2Q96IM9 177 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 ZNF577Q9BSK1 485 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 RUSC1Q9BVN2 902 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 TTYH3Q9C0H2 523 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 PKD2L1Q9P0L9 805 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 COL20A1Q9P218 1284 aa11.59□□□□□ -0.55
USP43-205ENST00000574408 CTDP1Q9Y5B0 961 aaPredicted RBP11.59□□□□□ -0.55
USP43-205ENST00000574408 RASSF10A6NK89 507 aa11.58□□□□□ -0.55
USP43-205ENST00000574408 KIF20AO95235 890 aa11.58□□□□□ -0.55
USP43-205ENST00000574408 ARHGAP29Q52LW3 1261 aa11.58□□□□□ -0.55
USP43-205ENST00000574408 ANGEL2Q5VTE6 544 aaKnown RBP11.58□□□□□ -0.55
USP43-205ENST00000574408 DCAF15Q66K64 600 aa11.58□□□□□ -0.55
USP43-205ENST00000574408 ERO1AQ96HE7 468 aa11.58□□□□□ -0.55
USP43-205ENST00000574408 HSD17B14Q9BPX1 270 aa11.58□□□□□ -0.55
USP43-205ENST00000574408 FZD1Q9UP38 647 aa11.58□□□□□ -0.55
USP43-205ENST00000574408 RSPH10B2B2RC85 870 aa11.58□□□□□ -0.56
USP43-205ENST00000574408 TBCAO75347 108 aaKnown RBP11.58□□□□□ -0.56
USP43-205ENST00000574408 EYA4O95677 639 aa11.58□□□□□ -0.56
USP43-205ENST00000574408 RSPH10BP0C881 870 aa11.58□□□□□ -0.56
USP43-205ENST00000574408 HSD17B4P51659 736 aa11.58□□□□□ -0.56
USP43-205ENST00000574408 PPP2R5CQ13362 524 aa11.58□□□□□ -0.56
USP43-205ENST00000574408 RETREG2Q8NC44 543 aa11.58□□□□□ -0.56
USP43-205ENST00000574408 CLEC4DQ8WXI8 215 aa11.58□□□□□ -0.56
USP43-205ENST00000574408 RPAP3Q9H6T3 665 aaPredicted RBP11.58□□□□□ -0.56
USP43-205ENST00000574408 GINM1Q9NU53 330 aa11.58□□□□□ -0.56
USP43-205ENST00000574408 COL4A3BPQ9Y5P4 624 aa11.58□□□□□ -0.56
USP43-205ENST00000574408 EPN1Q9Y6I3 576 aaPredicted RBP11.58□□□□□ -0.56
USP43-205ENST00000574408 CASP5P51878 434 aa11.58□□□□□ -0.56
USP43-205ENST00000574408 SETQ01105 290 aaPredicted RBP11.58□□□□□ -0.56
USP43-205ENST00000574408 FOXR2Q6PJQ5 311 aa11.58□□□□□ -0.56
USP43-205ENST00000574408 ZKSCAN4Q969J2 545 aaPredicted RBP11.58□□□□□ -0.56
USP43-205ENST00000574408 WRNIP1Q96S55 665 aa11.58□□□□□ -0.56
USP43-205ENST00000574408 SLC38A10Q9HBR0 1119 aa11.58□□□□□ -0.56
USP43-205ENST00000574408 FAM207AQ9NSI2 230 aaPredicted RBP11.58□□□□□ -0.56
USP43-205ENST00000574408 DDX39AO00148 427 aaKnown RBP11.57□□□□□ -0.56
USP43-205ENST00000574408 IPO5O00410 1097 aaKnown RBP11.57□□□□□ -0.56
USP43-205ENST00000574408 KIF5CO60282 957 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 SLITRK3O94933 977 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 ZBED6P86452 979 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 WDR59Q6PJI9 974 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 IL31RAQ8NI17 732 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 TRPM4Q8TD43 1214 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 ANKRD7Q92527 254 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 MXRA8Q9BRK3 442 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 UNC45AQ9H3U1 944 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 MMRN2Q9H8L6 949 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 TUFT1Q9NNX1 390 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 ZNHIT6Q9NWK9 470 aaKnown RBP11.57□□□□□ -0.56
USP43-205ENST00000574408 PPP1R9AQ9ULJ8 1098 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 NDUFA10O95299 355 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 MUM1L1Q5H9M0 696 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 MCF2L2Q86YR7 1114 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 LRRN4CLQ8ND94 238 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 TEKT3Q9BXF9 490 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 WDR11Q9BZH6 1224 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 KCTD10Q9H3F6 313 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 ZBTB39O15060 712 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 ITGB5P18084 799 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 USP14P54578 494 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 SCYL3Q8IZE3 742 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 BCAS3Q9H6U6 928 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 PICK1Q9NRD5 415 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 SIK3Q9Y2K2 1263 aa11.57□□□□□ -0.56
USP43-205ENST00000574408 PRPF6O94906 941 aaKnown RBP11.56□□□□□ -0.56
USP43-205ENST00000574408 RINT1Q6NUQ1 792 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms