RNA–Protein interactions for RNA: ENST00000573725.1

PRPF8-209, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-209ENST00000573725 RGL1Q9NZL6 768 aa7.18□□□□□ -1.26
PRPF8-209ENST00000573725 ADAMTS5Q9UNA0 930 aa7.18□□□□□ -1.26
PRPF8-209ENST00000573725 ATP11BQ9Y2G3 1177 aa7.18□□□□□ -1.26
PRPF8-209ENST00000573725 NUB1Q9Y5A7 615 aa7.18□□□□□ -1.26
PRPF8-209ENST00000573725 MYH7BA7E2Y1 1941 aa7.18□□□□□ -1.26
PRPF8-209ENST00000573725 TCF20Q9UGU0 1960 aaKnown RBP7.18□□□□□ -1.26
PRPF8-209ENST00000573725 BRWD1Q9NSI6 2320 aa7.18□□□□□ -1.26
PRPF8-209ENST00000573725 ERICH2A1L162 156 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 TRIM43BA6NCK2 446 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 SPDYE3A6NKU9 549 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 USP17L12C9JPN9 530 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 KBTBD13C9JR72 458 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 USP17L21D6R901 530 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 GOLGA6L19H0YKK7 550 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 WDR46O15213 610 aaKnown RBP7.17□□□□□ -1.26
PRPF8-209ENST00000573725 OPA1O60313 960 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 RNF40O75150 1001 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 HMMRO75330 724 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 SMNDC1O75940 238 aaKnown RBP eCLIP7.17□□□□□ -1.26
PRPF8-209ENST00000573725 KIAA0754O94854 1291 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 PGK2P07205 417 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 EEF2P13639 858 aaKnown RBP7.17□□□□□ -1.26
PRPF8-209ENST00000573725 ATP5JP18859 108 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 PAX3P23760 479 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 GBP2P32456 591 aaPredicted RBP7.17□□□□□ -1.26
PRPF8-209ENST00000573725 ADCYAP1R1P41586 468 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 ARHGAP25P42331 645 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 SFSWAPQ12872 951 aaKnown RBP7.17□□□□□ -1.26
PRPF8-209ENST00000573725 CASP8Q14790 479 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 SHHQ15465 462 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 TRIM60Q495X7 471 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 FAM47AQ5JRC9 791 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 C9orf50Q5SZB4 431 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 ACBD5Q5T8D3 534 aaPredicted RBP7.17□□□□□ -1.26
PRPF8-209ENST00000573725 FAM109BQ6ICB4 259 aaPredicted RBP7.17□□□□□ -1.26
PRPF8-209ENST00000573725 MIS18BP1Q6P0N0 1132 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 C16orf86Q6ZW13 317 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 B4GALNT4Q76KP1 1039 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 SH3RF1Q7Z6J0 888 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 FCHSD1Q86WN1 690 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 HOMER1Q86YM7 354 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 REPS2Q8NFH8 660 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 TET1Q8NFU7 2136 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 ATL2Q8NHH9 583 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 FAM81AQ8TBF8 368 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 FERMT2Q96AC1 680 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 TRIM43Q96BQ3 446 aaPredicted RBP7.17□□□□□ -1.26
PRPF8-209ENST00000573725 RSRC1Q96IZ7 334 aaKnown RBP7.17□□□□□ -1.26
PRPF8-209ENST00000573725 FAM161BQ96MY7 647 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 HAUS7Q99871 368 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.17□□□□□ -1.26
PRPF8-209ENST00000573725 YIPF2Q9BWQ6 316 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 TSGA10Q9BZW7 698 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 DNAJC25Q9H1X3 360 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 MMADHCQ9H3L0 296 aaPredicted RBP7.17□□□□□ -1.26
PRPF8-209ENST00000573725 VIPAS39Q9H9C1 493 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 SLC40A1Q9NP59 571 aa7.17□□□□□ -1.26
PRPF8-209ENST00000573725 G3BP2Q9UN86 482 aaKnown RBP7.17□□□□□ -1.26
PRPF8-209ENST00000573725 VWA5AO00534 786 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 LIN7AO14910 233 aaPredicted RBP7.16□□□□□ -1.26
PRPF8-209ENST00000573725 STX6O43752 255 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 ZEB2O60315 1214 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 RAB11FIP3O75154 756 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 SLC25A27O95847 323 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 FCER1AP12319 257 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 TAL1P17542 331 aaPredicted RBP7.16□□□□□ -1.26
PRPF8-209ENST00000573725 ITGB8P26012 769 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 SLC8A1P32418 973 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 IRAK1P51617 712 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 ZBED6P86452 979 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 ROR2Q01974 943 aaKnown RBP7.16□□□□□ -1.26
PRPF8-209ENST00000573725 UBE3CQ15386 1083 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 CCDC181Q5TID7 509 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 CAPRIN2Q6IMN6 1127 aaKnown RBP7.16□□□□□ -1.26
PRPF8-209ENST00000573725 ARMCX5Q6P1M9 558 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 SLC30A9Q6PML9 568 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 FAM228AQ86W67 206 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 RIOX2Q8IUF8 465 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 TRIM58Q8NG06 486 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 ZFAND2BQ8WV99 257 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 C17orf50Q8WW18 174 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 BADQ92934 168 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 LENG1Q96BZ8 264 aaPredicted RBP7.16□□□□□ -1.26
PRPF8-209ENST00000573725 BICD1Q96G01 975 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 CCDC17Q96LX7 622 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 AGAP3Q96P47 875 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 ALS2CR12Q96Q35 445 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 MMP19Q99542 508 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 ARPC5LQ9BPX5 153 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.16□□□□□ -1.262e-7■■□□□ 13.6
PRPF8-209ENST00000573725 PUS7LQ9H0K6 701 aaKnown RBP7.16□□□□□ -1.26
PRPF8-209ENST00000573725 TSPYL2Q9H2G4 693 aaPredicted RBP7.16□□□□□ -1.26
PRPF8-209ENST00000573725 SH2D4AQ9H788 454 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 ANKZF1Q9H8Y5 726 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 KANSL2Q9H9L4 492 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 TMEM165Q9HC07 324 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 ABCB6Q9NP58 842 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 PRDM5Q9NQX1 630 aaPredicted RBP7.16□□□□□ -1.26
PRPF8-209ENST00000573725 PDLIM7Q9NR12 457 aa7.16□□□□□ -1.26
PRPF8-209ENST00000573725 SLC5A4Q9NY91 659 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms