RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 DGKDQ16760 1214 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 Q4G0T1 1027 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 MCTP2Q6DN12 878 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 GDF6Q6KF10 455 aaPredicted RBP7.93□□□□□ -1.14
SMG6-209ENST00000571442 B3GNT9Q6UX72 402 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 NEK8Q86SG6 692 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 POTEDQ86YR6 584 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 DHX38Q92620 1227 aaKnown RBP7.93□□□□□ -1.14
SMG6-209ENST00000571442 SLC5A5Q92911 643 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 VWCEQ96DN2 955 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 ZBTB10Q96DT7 871 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 CDHR1Q96JP9 859 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 ZNF577Q9BSK1 485 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 TMEM60Q9H2L4 133 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 UNC45AQ9H3U1 944 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 RNPEPQ9H4A4 650 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 JPH1Q9HDC5 661 aaPredicted RBP7.93□□□□□ -1.14
SMG6-209ENST00000571442 KCNMB3Q9NPA1 279 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 HDAC6Q9UBN7 1215 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 SLC9A2Q9UBY0 812 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 DDX25Q9UHL0 483 aaKnown RBP7.93□□□□□ -1.14
SMG6-209ENST00000571442 TBX21Q9UL17 535 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 SMC3Q9UQE7 1217 aa7.93□□□□□ -1.14
SMG6-209ENST00000571442 MYH9P35579 1960 aaKnown RBP7.92□□□□□ -1.14
SMG6-209ENST00000571442 IGKV6D-21A0A0A0MT36 114 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 EML1O00423 815 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 NOP56O00567 594 aaKnown RBP7.92□□□□□ -1.14
SMG6-209ENST00000571442 CCNT1O60563 726 aaKnown RBP7.92□□□□□ -1.14
SMG6-209ENST00000571442 PPFIA4O75335 1185 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 LGR5O75473 907 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 PSMD10O75832 226 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 CABYRO75952 493 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 CLTBP09497 229 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 ATP2B1P20020 1258 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 MARK3P27448 753 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 SETQ01105 290 aaPredicted RBP7.92□□□□□ -1.14
SMG6-209ENST00000571442 TRIM29Q14134 588 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 UGCGQ16739 394 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 KIAA0753Q2KHM9 967 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 FAM47CQ5HY64 1035 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 MOXD1Q6UVY6 613 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 ABHD15Q6UXT9 468 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 CCDC60Q8IWA6 550 aaPredicted RBP7.92□□□□□ -1.14
SMG6-209ENST00000571442 IL27Q8NEV9 243 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 SEPT1Q8WYJ6 367 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 TOX2Q96NM4 488 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 OSBPL7Q9BZF2 842 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 PRO3102Q9H379 93 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 PRDM5Q9NQX1 630 aaPredicted RBP7.92□□□□□ -1.14
SMG6-209ENST00000571442 GTF2IRD1Q9UHL9 959 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 VAV3Q9UKW4 847 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 SIP14410 1827 aa7.92□□□□□ -1.14
SMG6-209ENST00000571442 KAT6AQ92794 2004 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 TET1Q8NFU7 2136 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 H3BRB1 525 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 KIAA0355O15063 1070 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 CHMP2AO43633 222 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 KPNA6O60684 536 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 SUPT20HL2P0C7V6 817 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 SMIM10L2AP0DMW4 78 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 SMIM10L2BP0DMW5 78 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 U2AF2P26368 475 aaKnown RBP eCLIP7.91□□□□□ -1.142e-8■■■□□ 17.8
SMG6-209ENST00000571442 HOXC8P31273 242 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 CYP2C18P33260 490 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 MAGEA10P43363 369 aaPredicted RBP7.91□□□□□ -1.14
SMG6-209ENST00000571442 EPHB4P54760 987 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 ADAM17P78536 824 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 MDM2Q00987 491 aaPredicted RBP7.91□□□□□ -1.14
SMG6-209ENST00000571442 SPIRE1Q08AE8 756 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 PLCB4Q15147 1175 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 ZNF174Q15697 407 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 BRDTQ58F21 947 aaPredicted RBP7.91□□□□□ -1.14
SMG6-209ENST00000571442 LRCH2Q5VUJ6 765 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 PPP4R3AQ6IN85 833 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 NFRKBQ6P4R8 1299 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 SESTD1Q86VW0 696 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 NOSTRINQ8IVI9 506 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 SPRYD3Q8NCJ5 442 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 GIMAP8Q8ND71 665 aaPredicted RBP7.91□□□□□ -1.14
SMG6-209ENST00000571442 TRAPPC12Q8WVT3 735 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 BADQ92934 168 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 MTMR9Q96QG7 549 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 SDF4Q9BRK5 362 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 PPP1R12CQ9BZL4 782 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 WNT8AQ9H1J5 351 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 FOXP1Q9H334 677 aaPredicted RBP7.91□□□□□ -1.14
SMG6-209ENST00000571442 TUT1Q9H6E5 874 aaKnown RBP7.91□□□□□ -1.14
SMG6-209ENST00000571442 BRMS1Q9HCU9 246 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 SETD4Q9NVD3 440 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 WRAP73Q9P2S5 460 aaPredicted RBP7.91□□□□□ -1.14
SMG6-209ENST00000571442 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.91□□□□□ -1.14
SMG6-209ENST00000571442 PCDHB6Q9Y5E3 794 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 EMSYQ7Z589 1322 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 TANC1Q9C0D5 1861 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 LAMA3Q16787 3333 aa7.91□□□□□ -1.14
SMG6-209ENST00000571442 EVPLQ92817 2033 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 TMEM150BA6NC51 233 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 TREHO43280 583 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 ZNF862O60290 1169 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 GAS7O60861 476 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms