RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 CDHR1Q96JP9 859 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 UIMC1Q96RL1 719 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 PCYT2Q99447 389 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 RNF26Q9BY78 433 aaPredicted RBP6.18□□□□□ -1.42
CHD3-212ENST00000570758 OSBPL7Q9BZF2 842 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 ZMYND12Q9H0C1 365 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 GLT8D2Q9H1C3 349 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 MTIF3Q9H2K0 278 aaKnown RBP6.18□□□□□ -1.42
CHD3-212ENST00000570758 RNPEPQ9H4A4 650 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 AGO4Q9HCK5 861 aaKnown RBP6.18□□□□□ -1.42
CHD3-212ENST00000570758 KCNH7Q9NS40 1196 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 PDRG1Q9NUG6 133 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 SETD4Q9NVD3 440 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 VPS54Q9P1Q0 977 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 SLC4A7Q9Y6M7 1214 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 TRIP12Q14669 1992 aaPredicted RBP6.18□□□□□ -1.42
CHD3-212ENST00000570758 IGLV3-22A0A075B6J6 115 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 FAM86B1E9PN63 330 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 MEIS1O00470 390 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 LGR5O75473 907 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 ARHGEF15O94989 841 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 SEC24BO95487 1268 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 CYP3A4P08684 503 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 FAM86B2P0C5J1 330 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 ACTN1P12814 892 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 ZNF76P36508 570 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 THPOP40225 353 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 DEFB103AP81534 67 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 AKAP17AQ02040 695 aaKnown RBP6.17□□□□□ -1.42
CHD3-212ENST00000570758 SSRP1Q08945 709 aaKnown RBP6.17□□□□□ -1.42
CHD3-212ENST00000570758 STK3Q13188 491 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 RAB30Q15771 203 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 CEP55Q53EZ4 464 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 CNKSR3Q6P9H4 555 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 RUFY4Q6ZNE9 571 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 NIPA1Q7RTP0 329 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 TMCO2Q7Z6W1 182 aaPredicted RBP6.17□□□□□ -1.42
CHD3-212ENST00000570758 PLA2G4DQ86XP0 818 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 LMBR1Q8WVP7 490 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 ATP6V0A1Q93050 837 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 ZBTB10Q96DT7 871 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 ZNF274Q96GC6 653 aaPredicted RBP6.17□□□□□ -1.42
CHD3-212ENST00000570758 AIFM3Q96NN9 605 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 SDF4Q9BRK5 362 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 ZNF576Q9H609 170 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 C6orf50Q9HD87 102 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 JPH1Q9HDC5 661 aaPredicted RBP6.17□□□□□ -1.42
CHD3-212ENST00000570758 SLC9A2Q9UBY0 812 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 MSRAQ9UJ68 235 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 ZNF215Q9UL58 517 aaPredicted RBP6.17□□□□□ -1.42
CHD3-212ENST00000570758 NFASCO94856 1347 aa6.17□□□□□ -1.42
CHD3-212ENST00000570758 GBF1Q92538 1859 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 RSPH10B2B2RC85 870 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 DDX39AO00148 427 aaKnown RBP6.16□□□□□ -1.42
CHD3-212ENST00000570758 MAFGO15525 162 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 DHX15O43143 795 aaKnown RBP6.16□□□□□ -1.42
CHD3-212ENST00000570758 BAIAP3O94812 1187 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 ATG7O95352 703 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 PARNO95453 639 aaKnown RBP6.16□□□□□ -1.42
CHD3-212ENST00000570758 CCNE2O96020 404 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 CTSHP09668 335 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 RSPH10BP0C881 870 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 GNAT1P11488 350 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 FOSL2P15408 326 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 GNA11P29992 359 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 NLRP5P59047 1200 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 ACTR2P61160 394 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 WDR5P61964 334 aaKnown RBP6.16□□□□□ -1.42
CHD3-212ENST00000570758 MGAT3Q09327 533 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 SCRN1Q12765 414 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 PPFIA1Q13136 1202 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 ADGRE1Q14246 886 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 NPY5RQ15761 445 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 GRIK4Q16099 956 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 MARCH8Q5T0T0 291 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 SPRED2Q7Z698 418 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 HERC6Q8IVU3 1022 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 REXO1Q8N1G1 1221 aaKnown RBP6.16□□□□□ -1.42
CHD3-212ENST00000570758 USP38Q8NB14 1042 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 SLC17A8Q8NDX2 589 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 CCDC148Q8NFR7 591 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 MAFAQ8NHW3 353 aaPredicted RBP6.16□□□□□ -1.42
CHD3-212ENST00000570758 CCDC12Q8WUD4 166 aaPredicted RBP6.16□□□□□ -1.42
CHD3-212ENST00000570758 GLG1Q92896 1179 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 IL17RAQ96F46 866 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 SLC9A7Q96T83 725 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 SMARCAD1Q9H4L7 1026 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 PRDM12Q9H4Q4 367 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 ERAP1Q9NZ08 941 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 TPCN1Q9ULQ1 816 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 PCDHA11Q9Y5I1 949 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 EMSYQ7Z589 1322 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 NRCAMQ92823 1304 aa6.16□□□□□ -1.42
CHD3-212ENST00000570758 PTPRSQ13332 1948 aa6.15□□□□□ -1.42
CHD3-212ENST00000570758 IGKV6D-21A0A0A0MT36 114 aa6.15□□□□□ -1.42
CHD3-212ENST00000570758 ABHD14A-ACY1A0A1B0GW23 586 aa6.15□□□□□ -1.42
CHD3-212ENST00000570758 LCHNA4D1U4 455 aa6.15□□□□□ -1.42
CHD3-212ENST00000570758 MBLAC1A4D2B0 266 aaPredicted RBP6.15□□□□□ -1.42
CHD3-212ENST00000570758 EPOPA6NHQ4 379 aa6.15□□□□□ -1.42
CHD3-212ENST00000570758 M0R2N6 131 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms