RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 PRDM9Q9NQV7 894 aa8.93□□□□□ -0.98
TCF4-246ENST00000570287 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.93□□□□□ -0.98
TCF4-246ENST00000570287 AASDHPPTQ9NRN7 309 aa8.93□□□□□ -0.98
TCF4-246ENST00000570287 TOMM22Q9NS69 142 aa8.93□□□□□ -0.98
TCF4-246ENST00000570287 ABCF2Q9UG63 623 aa8.93□□□□□ -0.98
TCF4-246ENST00000570287 GJB6O95452 261 aa8.93□□□□□ -0.98
TCF4-246ENST00000570287 SLC3A2P08195 630 aaKnown RBP8.93□□□□□ -0.98
TCF4-246ENST00000570287 PAX7P23759 505 aa8.93□□□□□ -0.98
TCF4-246ENST00000570287 PCNX4Q63HM2 1172 aa8.93□□□□□ -0.98
TCF4-246ENST00000570287 ADGRA1Q86SQ6 560 aa8.93□□□□□ -0.98
TCF4-246ENST00000570287 RIOK1Q9BRS2 568 aaKnown RBP8.93□□□□□ -0.98
TCF4-246ENST00000570287 HPSEQ9Y251 543 aa8.93□□□□□ -0.98
TCF4-246ENST00000570287 GPSM3Q9Y4H4 160 aa8.93□□□□□ -0.98
TCF4-246ENST00000570287 MRFAP1Q9Y605 127 aa8.93□□□□□ -0.98
TCF4-246ENST00000570287 CACNA1SQ13698 1873 aa8.93□□□□□ -0.98
TCF4-246ENST00000570287 COL1A1P02452 1464 aaPredicted RBP8.92□□□□□ -0.98
TCF4-246ENST00000570287 GEMIN4P57678 1058 aaKnown RBP8.92□□□□□ -0.98
TCF4-246ENST00000570287 SAFBQ15424 915 aaKnown RBP eCLIP8.92□□□□□ -0.98
TCF4-246ENST00000570287 FAM98CQ17RN3 349 aaKnown RBP8.92□□□□□ -0.98
TCF4-246ENST00000570287 FBXW10Q5XX13 1052 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 FOXR1Q6PIV2 292 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 AFAP1L2Q8N4X5 818 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 ESR2Q92731 530 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 CCDC34Q96HJ3 373 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 PAIP2Q9BPZ3 127 aaKnown RBP8.92□□□□□ -0.98
TCF4-246ENST00000570287 CARD6Q9BX69 1037 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 PARD6BQ9BYG5 372 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 SYNPO2Q9UMS6 1093 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 IPPQ9Y573 584 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 PDS5AQ29RF7 1337 aaKnown RBP8.92□□□□□ -0.98
TCF4-246ENST00000570287 MPHOSPH10O00566 681 aaKnown RBP8.92□□□□□ -0.98
TCF4-246ENST00000570287 DEXIO95424 95 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 MMP1P03956 469 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 PCP11498 1178 aaKnown RBP8.92□□□□□ -0.98
TCF4-246ENST00000570287 MARCKSP29966 332 aaPredicted RBP8.92□□□□□ -0.98
TCF4-246ENST00000570287 SYKP43405 635 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 NLRP12P59046 1061 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 LONRF2Q1L5Z9 754 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 FAM84BQ96KN1 310 aaPredicted RBP8.92□□□□□ -0.98
TCF4-246ENST00000570287 UBAC1Q9BSL1 405 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 BRIP1Q9BX63 1249 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 NARFQ9UHQ1 456 aa8.92□□□□□ -0.98
TCF4-246ENST00000570287 M0R2N6 131 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 TOM1O60784 492 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 CUTAO60888 179 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 SMC2O95347 1197 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 SFPQP23246 707 aaKnown RBP eCLIP8.91□□□□□ -0.98
TCF4-246ENST00000570287 RESP18Q5W5W9 173 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 TBC1D9BQ66K14 1250 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 NOSTRINQ8IVI9 506 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 CRACR2BQ8N4Y2 399 aaPredicted RBP8.91□□□□□ -0.98
TCF4-246ENST00000570287 AOPEPQ8N6M6 819 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 COG1Q8WTW3 980 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 SDR42E1Q8WUS8 393 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 MFSD3Q96ES6 412 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 ZKSCAN3Q9BRR0 538 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 TACO1Q9BSH4 297 aaKnown RBP8.91□□□□□ -0.98
TCF4-246ENST00000570287 RANBP17Q9H2T7 1088 aaKnown RBP8.91□□□□□ -0.98
TCF4-246ENST00000570287 FOXP1Q9H334 677 aaPredicted RBP8.91□□□□□ -0.98
TCF4-246ENST00000570287 PCDHGB3Q9Y5G1 929 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 MROH7-TTC4A0A0A0MT08 1334 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 COL24A1Q17RW2 1714 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 RPS6KA4O75676 772 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 TCEA3O75764 348 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 MAN1A1P33908 653 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 STRN3Q13033 797 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 SEC23AQ15436 765 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 C4orf48Q5BLP8 95 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 MRM1Q6IN84 353 aaKnown RBP8.91□□□□□ -0.98
TCF4-246ENST00000570287 SHC4Q6S5L8 630 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 LRRC31Q6UY01 552 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 SH3BP5LQ7L8J4 393 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 SAMD7Q7Z3H4 446 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 FANCBQ8NB91 859 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 THAP3Q8WTV1 239 aaPredicted RBP8.91□□□□□ -0.98
TCF4-246ENST00000570287 CELF1Q92879 486 aaKnown RBP8.91□□□□□ -0.98
TCF4-246ENST00000570287 ERCC4Q92889 916 aaPredicted RBP8.91□□□□□ -0.98
TCF4-246ENST00000570287 NLRP3Q96P20 1036 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 EIF2AK1Q9BQI3 630 aaKnown RBP8.91□□□□□ -0.98
TCF4-246ENST00000570287 TARS2Q9BW92 718 aaKnown RBP8.91□□□□□ -0.98
TCF4-246ENST00000570287 RHOBTB2Q9BYZ6 727 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 ANKRD2Q9GZV1 360 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 FAM8A1Q9UBU6 413 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 ZNF180Q9UJW8 692 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 RAB21Q9UL25 225 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 USP20Q9Y2K6 914 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 TAF1P21675 1872 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 A6NJY4 79 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 AGR2O95994 175 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 TXLNAP40222 546 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 RPS8P62241 208 aaKnown RBP8.91□□□□□ -0.98
TCF4-246ENST00000570287 PTPRNQ16849 979 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 BEND6Q5SZJ8 279 aaPredicted RBP8.91□□□□□ -0.98
TCF4-246ENST00000570287 CCDC174Q6PII3 467 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 TADA2BQ86TJ2 420 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 KCNK17Q96T54 332 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 CAAP1Q9H8G2 361 aa8.91□□□□□ -0.98
TCF4-246ENST00000570287 PUF60Q9UHX1 559 aaKnown RBP8.91□□□□□ -0.98
TCF4-246ENST00000570287 DUOX1Q9NRD9 1551 aa8.9□□□□□ -0.98
TCF4-246ENST00000570287 TNKSO95271 1327 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms