RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 SMAD3P84022 425 aaKnown RBP14.85□□□□□ -0.03
CNOT1-220ENST00000569916 PTK7Q13308 1070 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 NPY5RQ15761 445 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 ME3Q16798 604 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 Q7L0L9 218 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 CCDC155Q8N6L0 562 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 TET1Q8NFU7 2136 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 SEPT1Q8WYJ6 367 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 HERVK_113Q902F9 699 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 WNT8BQ93098 351 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 SLC9A2Q9UBY0 812 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 ZNF215Q9UL58 517 aaPredicted RBP14.85□□□□□ -0.03
CNOT1-220ENST00000569916 C17orf102A2RUQ5 167 aa14.84□□□□□ -0.03
CNOT1-220ENST00000569916 DTNBO60941 627 aa14.84□□□□□ -0.03
CNOT1-220ENST00000569916 FGBP02675 491 aa14.84□□□□□ -0.03
CNOT1-220ENST00000569916 RFC2P35250 354 aa14.84□□□□□ -0.03
CNOT1-220ENST00000569916 TRIM71Q2Q1W2 868 aaKnown RBP14.84□□□□□ -0.03
CNOT1-220ENST00000569916 FAM109BQ6ICB4 259 aaPredicted RBP14.84□□□□□ -0.03
CNOT1-220ENST00000569916 PLA2G4DQ86XP0 818 aa14.84□□□□□ -0.03
CNOT1-220ENST00000569916 RPUSD2Q8IZ73 545 aaKnown RBP14.84□□□□□ -0.03
CNOT1-220ENST00000569916 FAM177A1Q8N128 213 aaPredicted RBP14.84□□□□□ -0.03
CNOT1-220ENST00000569916 RETREG2Q8NC44 543 aa14.84□□□□□ -0.03
CNOT1-220ENST00000569916 DAGLBQ8NCG7 672 aa14.84□□□□□ -0.03
CNOT1-220ENST00000569916 AFAP1L1Q8TED9 768 aa14.84□□□□□ -0.03
CNOT1-220ENST00000569916 GTF3C6Q969F1 213 aa14.84□□□□□ -0.03
CNOT1-220ENST00000569916 SDF4Q9BRK5 362 aa14.84□□□□□ -0.03
CNOT1-220ENST00000569916 RNPEPQ9H4A4 650 aa14.84□□□□□ -0.03
CNOT1-220ENST00000569916 CXXC1Q9P0U4 656 aaPredicted RBP14.84□□□□□ -0.03
CNOT1-220ENST00000569916 PCDHA4Q9UN74 947 aa14.84□□□□□ -0.03
CNOT1-220ENST00000569916 EMSYQ7Z589 1322 aa14.84□□□□□ -0.03
CNOT1-220ENST00000569916 M0R2N6 131 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 EDIL3O43854 480 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 PFKMP08237 780 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 CKBP12277 381 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 CIITAP33076 1130 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 TRAF7Q6Q0C0 670 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 LRRC8DQ7L1W4 858 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 OTOP2Q7RTS6 562 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 DEFB128Q7Z7B8 93 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 SERINC5Q86VE9 423 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 BLIDQ8IZY5 108 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 DEFB123Q8N688 67 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 NECAB1Q8N987 351 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 LENG9Q96B70 501 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 PCYT2Q99447 389 aa14.83□□□□□ -0.04
CNOT1-220ENST00000569916 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.82□□□□□ -0.04
CNOT1-220ENST00000569916 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.82□□□□□ -0.04
CNOT1-220ENST00000569916 TREHO43280 583 aa14.82□□□□□ -0.04
CNOT1-220ENST00000569916 LGR5O75473 907 aa14.82□□□□□ -0.04
CNOT1-220ENST00000569916 SELPP16109 830 aa14.82□□□□□ -0.04
CNOT1-220ENST00000569916 ACTR2P61160 394 aa14.82□□□□□ -0.04
CNOT1-220ENST00000569916 ADAM17P78536 824 aa14.82□□□□□ -0.04
CNOT1-220ENST00000569916 SETQ01105 290 aaPredicted RBP14.82□□□□□ -0.04
CNOT1-220ENST00000569916 MAPK8IP2Q13387 824 aaPredicted RBP14.82□□□□□ -0.04
CNOT1-220ENST00000569916 GPNMBQ14956 572 aa14.82□□□□□ -0.04
CNOT1-220ENST00000569916 GALNT17Q6IS24 598 aa14.82□□□□□ -0.04
CNOT1-220ENST00000569916 LMBR1Q8WVP7 490 aa14.82□□□□□ -0.04
CNOT1-220ENST00000569916 ATP6V0A1Q93050 837 aa14.82□□□□□ -0.04
CNOT1-220ENST00000569916 KIF2CQ99661 725 aa14.82□□□□□ -0.04
CNOT1-220ENST00000569916 MTIF3Q9H2K0 278 aaKnown RBP14.82□□□□□ -0.04
CNOT1-220ENST00000569916 SETD4Q9NVD3 440 aa14.82□□□□□ -0.04
CNOT1-220ENST00000569916 ERAP1Q9NZ08 941 aa14.82□□□□□ -0.04
CNOT1-220ENST00000569916 GRXCR1A8MXD5 290 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 DDX39AO00148 427 aaKnown RBP14.81□□□□□ -0.04
CNOT1-220ENST00000569916 IPO5O00410 1097 aaKnown RBP14.81□□□□□ -0.04
CNOT1-220ENST00000569916 DHX15O43143 795 aaKnown RBP14.81□□□□□ -0.04
CNOT1-220ENST00000569916 ATG7O95352 703 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 CCNE2O96020 404 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 MARK3P27448 753 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 ST3GAL1Q11201 340 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 PRR16Q569H4 304 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 ZNF618Q5T7W0 954 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 TBCKQ8TEA7 893 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 GLG1Q92896 1179 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 ZNF577Q9BSK1 485 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 PHF20Q9BVI0 1012 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 C22orf23Q9BZE7 217 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 SMARCAD1Q9H4L7 1026 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 GJB4Q9NTQ9 266 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 KCNJ14Q9UNX9 436 aa14.81□□□□□ -0.04
CNOT1-220ENST00000569916 MYH9P35579 1960 aaKnown RBP14.81□□□□□ -0.04
CNOT1-220ENST00000569916 MICAL3Q7RTP6 2002 aa14.8□□□□□ -0.04
CNOT1-220ENST00000569916 NBNO60934 754 aa14.8□□□□□ -0.04
CNOT1-220ENST00000569916 PARNO95453 639 aaKnown RBP14.8□□□□□ -0.04
CNOT1-220ENST00000569916 GNAT1P11488 350 aa14.8□□□□□ -0.04
CNOT1-220ENST00000569916 FDPSP14324 419 aaKnown RBP14.8□□□□□ -0.04
CNOT1-220ENST00000569916 DNAJB2P25686 324 aa14.8□□□□□ -0.04
CNOT1-220ENST00000569916 USP11P51784 963 aa14.8□□□□□ -0.04
CNOT1-220ENST00000569916 MBTPS1Q14703 1052 aa14.8□□□□□ -0.04
CNOT1-220ENST00000569916 ZNF697Q5TEC3 545 aa14.8□□□□□ -0.04
CNOT1-220ENST00000569916 NSUN7Q8NE18 718 aaKnown RBP14.8□□□□□ -0.04
CNOT1-220ENST00000569916 UIMC1Q96RL1 719 aa14.8□□□□□ -0.04
CNOT1-220ENST00000569916 MTMR10Q9NXD2 777 aa14.8□□□□□ -0.04
CNOT1-220ENST00000569916 ORC3Q9UBD5 711 aaPredicted RBP14.8□□□□□ -0.04
CNOT1-220ENST00000569916 NRCAMQ92823 1304 aa14.8□□□□□ -0.04
CNOT1-220ENST00000569916 IGKV6D-21A0A0A0MT36 114 aa14.79□□□□□ -0.04
CNOT1-220ENST00000569916 ZBBXA8MT70 800 aa14.79□□□□□ -0.04
CNOT1-220ENST00000569916 RBAK-RBAKDNI3L0D1 243 aa14.79□□□□□ -0.04
CNOT1-220ENST00000569916 CXCL10P02778 98 aa14.79□□□□□ -0.04
CNOT1-220ENST00000569916 ACTN1P12814 892 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms