RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 NPY5RQ15761 445 aa15.71■□□□□ 0.11
HERPUD1-218ENST00000569569 LRIT3Q3SXY7 679 aa15.71■□□□□ 0.11
HERPUD1-218ENST00000569569 UTP14CQ5TAP6 766 aaKnown RBP15.71■□□□□ 0.11
HERPUD1-218ENST00000569569 UMODL1Q5DID0 1318 aa15.7■□□□□ 0.1
HERPUD1-218ENST00000569569 TET1Q8NFU7 2136 aa15.7■□□□□ 0.1
HERPUD1-218ENST00000569569 TANC1Q9C0D5 1861 aa15.7■□□□□ 0.1
HERPUD1-218ENST00000569569 CSF2RAP15509 400 aa15.7■□□□□ 0.1
HERPUD1-218ENST00000569569 EPHB4P54760 987 aa15.7■□□□□ 0.1
HERPUD1-218ENST00000569569 CCL23P55773 120 aa15.7■□□□□ 0.1
HERPUD1-218ENST00000569569 ITGB3BPQ13352 177 aaPredicted RBP15.7■□□□□ 0.1
HERPUD1-218ENST00000569569 BFSP2Q13515 415 aa15.7■□□□□ 0.1
HERPUD1-218ENST00000569569 TBCKQ8TEA7 893 aa15.7■□□□□ 0.1
HERPUD1-218ENST00000569569 IPO5O00410 1097 aaKnown RBP15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 PITPNM1O00562 1244 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 EDIL3O43854 480 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 ST3GAL1Q11201 340 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 NONOQ15233 471 aaKnown RBP eCLIP15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 PRR16Q569H4 304 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 C9orf50Q5SZB4 431 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 KRT25Q7Z3Z0 450 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 TRIM50Q86XT4 487 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 CCDC155Q8N6L0 562 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 RETREG2Q8NC44 543 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 CAGE1Q8TC20 777 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 CTAGE1Q96RT6 745 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 LLPHQ9BRT6 129 aaKnown RBP15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 ZNF577Q9BSK1 485 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 WNT8AQ9H1J5 351 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 RNPEPQ9H4A4 650 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 SMARCAD1Q9H4L7 1026 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 IL23AQ9NPF7 189 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 SH2B1Q9NRF2 756 aaPredicted RBP15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 GJB4Q9NTQ9 266 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 TBC1D22BQ9NU19 505 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 ERAP1Q9NZ08 941 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 LAMA3Q16787 3333 aa15.69■□□□□ 0.1
HERPUD1-218ENST00000569569 EVPLQ92817 2033 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 C17orf102A2RUQ5 167 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 DHX15O43143 795 aaKnown RBP15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 ST18O60284 1047 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 JAK2O60674 1132 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 ATG7O95352 703 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 SMIM10L2AP0DMW4 78 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 SMIM10L2BP0DMW5 78 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 GNAT1P11488 350 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 ACTR2P61160 394 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 ZNF200P98182 395 aaPredicted RBP15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 PTK7Q13308 1070 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 C16orf59Q7L2K0 433 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 CCDC83Q8IWF9 413 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 RPUSD2Q8IZ73 545 aaKnown RBP15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 GLG1Q92896 1179 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 AZI2Q9H6S1 392 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 EMSYQ7Z589 1322 aa15.68■□□□□ 0.1
HERPUD1-218ENST00000569569 CYP3A7-CYP3A51PA0A087WV96 503 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 CCDC194A0A1B0GVG4 234 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 DDX39AO00148 427 aaKnown RBP15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 LGR5O75473 907 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 IQCF3P0C7M6 154 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 ACRP10323 421 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 CYP3A7P24462 503 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 HOXC8P31273 242 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 HIC1Q14526 733 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 TMEM240Q5SV17 173 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 PSRC1Q6PGN9 363 aaPredicted RBP15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 MOXD1Q6UVY6 613 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 AFAP1L1Q8TED9 768 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 ATP6V0A1Q93050 837 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 LENG9Q96B70 501 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 SCLYQ96I15 445 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 TBC1D32Q96NH3 1257 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.67■□□□□ 0.17e-9■■□□□ 12
HERPUD1-218ENST00000569569 BRMS1Q9HCU9 246 aa15.67■□□□□ 0.1
HERPUD1-218ENST00000569569 SOX1O00570 391 aaPredicted RBP15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 RFC2P35250 354 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 KRT2P35908 639 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 STAT5BP51692 787 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 RBL2Q08999 1139 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 TRIM29Q14134 588 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 INF2Q27J81 1249 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 Q4G0T1 1027 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 ZNF746Q6NUN9 644 aaPredicted RBP15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 ZNF365Q70YC5 407 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 PLPPR4Q7Z2D5 763 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 OXER1Q8TDS5 423 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 DHX38Q92620 1227 aaKnown RBP15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 TNPO1Q92973 898 aaKnown RBP15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 RNPC3Q96LT9 517 aaKnown RBP15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 UIMC1Q96RL1 719 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 PCYT2Q99447 389 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 SETD4Q9NVD3 440 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 TCEAL9Q9UHQ7 104 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 NRCAMQ92823 1304 aa15.66■□□□□ 0.1
HERPUD1-218ENST00000569569 LOXHD1Q8IVV2 1947 aa15.65■□□□□ 0.1
HERPUD1-218ENST00000569569 IGKV6D-21A0A0A0MT36 114 aa15.65■□□□□ 0.1
HERPUD1-218ENST00000569569 MSH4O15457 936 aa15.65■□□□□ 0.1
HERPUD1-218ENST00000569569 TREHO43280 583 aa15.65■□□□□ 0.1
HERPUD1-218ENST00000569569 PARNO95453 639 aaKnown RBP15.65■□□□□ 0.1
HERPUD1-218ENST00000569569 CCNE2O96020 404 aa15.65■□□□□ 0.1
HERPUD1-218ENST00000569569 FGBP02675 491 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms