RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 BLIDQ8IZY5 108 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 FAM177A1Q8N128 213 aaPredicted RBP10.68□□□□□ -0.7
UBR1-210ENST00000569337 RETREG2Q8NC44 543 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 FOXD4L4Q8WXT5 416 aaPredicted RBP10.68□□□□□ -0.7
UBR1-210ENST00000569337 PGBD1Q96JS3 809 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.68□□□□□ -0.7
UBR1-210ENST00000569337 C6orf50Q9HD87 102 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 IL23AQ9NPF7 189 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 HDAC6Q9UBN7 1215 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 DAXXQ9UER7 740 aaPredicted RBP10.68□□□□□ -0.7
UBR1-210ENST00000569337 KIF3AQ9Y496 699 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 UBIAD1Q9Y5Z9 338 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 TRIOBPQ9H2D6 2365 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 KIAA1217Q5T5P2 1943 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 H3BQV1 296 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 H3BRB1 525 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 HAS3O00219 553 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 BRD1O95696 1058 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 FGBP02675 491 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 XBP1P17861 261 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 PDCP20941 246 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 GNA11P29992 359 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 KRT2P35908 639 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 ZNF76P36508 570 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 SP4Q02446 784 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 BFSP2Q13515 415 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 TRIM29Q14134 588 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 JAKMIP3Q5VZ66 844 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 MCTP2Q6DN12 878 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 GDF6Q6KF10 455 aaPredicted RBP10.67□□□□□ -0.7
UBR1-210ENST00000569337 ZNF365Q70YC5 407 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 C16orf59Q7L2K0 433 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 FERMT3Q86UX7 667 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 DEFB123Q8N688 67 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 SCLYQ96I15 445 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 MXRA8Q9BRK3 442 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 C16orf70Q9BSU1 422 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 ANO3Q9BYT9 981 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 WNT8AQ9H1J5 351 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 TUT1Q9H6E5 874 aaKnown RBP10.67□□□□□ -0.7
UBR1-210ENST00000569337 JADE2Q9NQC1 790 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 GTF2IRD1Q9UHL9 959 aa10.67□□□□□ -0.7
UBR1-210ENST00000569337 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.66□□□□□ -0.7
UBR1-210ENST00000569337 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.66□□□□□ -0.7
UBR1-210ENST00000569337 PITPNM1O00562 1244 aa10.66□□□□□ -0.7
UBR1-210ENST00000569337 WNT7AO00755 349 aa10.66□□□□□ -0.7
UBR1-210ENST00000569337 ATP9AO75110 1047 aa10.66□□□□□ -0.7
UBR1-210ENST00000569337 LGALS2P05162 132 aa10.66□□□□□ -0.7
UBR1-210ENST00000569337 U2AF2P26368 475 aaKnown RBP eCLIP10.66□□□□□ -0.7
UBR1-210ENST00000569337 SMAD3P84022 425 aaKnown RBP10.66□□□□□ -0.7
UBR1-210ENST00000569337 RESTQ13127 1097 aa10.66□□□□□ -0.7
UBR1-210ENST00000569337 UTP14CQ5TAP6 766 aaKnown RBP10.66□□□□□ -0.7
UBR1-210ENST00000569337 MCTP1Q6DN14 999 aa10.66□□□□□ -0.7
UBR1-210ENST00000569337 GALNT17Q6IS24 598 aa10.66□□□□□ -0.7
UBR1-210ENST00000569337 REXO1Q8N1G1 1221 aaKnown RBP10.66□□□□□ -0.7
UBR1-210ENST00000569337 CAGE1Q8TC20 777 aa10.66□□□□□ -0.7
UBR1-210ENST00000569337 BICD2Q8TD16 824 aa10.66□□□□□ -0.7
UBR1-210ENST00000569337 GPR20Q99678 358 aa10.66□□□□□ -0.7
UBR1-210ENST00000569337 MTIF3Q9H2K0 278 aaKnown RBP10.66□□□□□ -0.7
UBR1-210ENST00000569337 FOXP1Q9H334 677 aaPredicted RBP10.66□□□□□ -0.7
UBR1-210ENST00000569337 PKD2L1Q9P0L9 805 aa10.66□□□□□ -0.7
UBR1-210ENST00000569337 ZNF215Q9UL58 517 aaPredicted RBP10.66□□□□□ -0.7
UBR1-210ENST00000569337 C17orf102A2RUQ5 167 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 PFKMP08237 780 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 IQCF3P0C7M6 154 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 ZSCAN22P10073 491 aaPredicted RBP10.65□□□□□ -0.7
UBR1-210ENST00000569337 KCNA2P16389 499 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 SREBF1P36956 1147 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 TOB1P50616 345 aaPredicted RBP10.65□□□□□ -0.7
UBR1-210ENST00000569337 ARHGAP4P98171 946 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 PTK7Q13308 1070 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 CEP55Q53EZ4 464 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 FAM173BQ6P4H8 233 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 PIK3AP1Q6ZUJ8 805 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 Q7L0L9 218 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 OTOP2Q7RTS6 562 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 DEFB128Q7Z7B8 93 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 NOSTRINQ8IVI9 506 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 CYP2W1Q8TAV3 490 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 SEPT1Q8WYJ6 367 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 HERVK_113Q902F9 699 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 CHAMP1Q96JM3 812 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 KCNH7Q9NS40 1196 aa10.65□□□□□ -0.7
UBR1-210ENST00000569337 LAMA3Q16787 3333 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 LTBP2Q14767 1821 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 MEIS1O00470 390 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 F13A1P00488 732 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 SMIM10L2AP0DMW4 78 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 SMIM10L2BP0DMW5 78 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 ARP10275 920 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 GNAT1P11488 350 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 RFC2P35250 354 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 TCF7P36402 384 aaPredicted RBP10.64□□□□□ -0.71
UBR1-210ENST00000569337 ZNF200P98182 395 aaPredicted RBP10.64□□□□□ -0.71
UBR1-210ENST00000569337 SAFBQ15424 915 aaKnown RBP eCLIP10.64□□□□□ -0.71
UBR1-210ENST00000569337 ZNF697Q5TEC3 545 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 FAM109BQ6ICB4 259 aaPredicted RBP10.64□□□□□ -0.71
UBR1-210ENST00000569337 TRIM50Q86XT4 487 aa10.64□□□□□ -0.71
UBR1-210ENST00000569337 AFAP1L1Q8TED9 768 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms