RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 TCTN1Q2MV58 587 aa17.75■□□□□ 0.43
SCAMP2-210ENST00000569124 TMEM31Q5JXX7 168 aa17.75■□□□□ 0.43
SCAMP2-210ENST00000569124 ZNF618Q5T7W0 954 aa17.75■□□□□ 0.43
SCAMP2-210ENST00000569124 FAM117BQ6P1L5 589 aa17.75■□□□□ 0.43
SCAMP2-210ENST00000569124 CCDC83Q8IWF9 413 aa17.75■□□□□ 0.43
SCAMP2-210ENST00000569124 NECAB1Q8N987 351 aa17.75■□□□□ 0.43
SCAMP2-210ENST00000569124 LRFN3Q9BTN0 628 aa17.75■□□□□ 0.43
SCAMP2-210ENST00000569124 JMJD4Q9H9V9 463 aa17.75■□□□□ 0.43
SCAMP2-210ENST00000569124 SUGCTQ9HAC7 445 aa17.75■□□□□ 0.43
SCAMP2-210ENST00000569124 NCOA5Q9HCD5 579 aaKnown RBP17.75■□□□□ 0.43
SCAMP2-210ENST00000569124 MUC6Q6W4X9 2439 aa17.74■□□□□ 0.43
SCAMP2-210ENST00000569124 KLRF2D3W0D1 207 aa17.74■□□□□ 0.43
SCAMP2-210ENST00000569124 LGR5O75473 907 aa17.74■□□□□ 0.43
SCAMP2-210ENST00000569124 MYCLP12524 364 aaPredicted RBP17.74■□□□□ 0.43
SCAMP2-210ENST00000569124 HSD17B4P51659 736 aa17.74■□□□□ 0.43
SCAMP2-210ENST00000569124 AKAP17AQ02040 695 aaKnown RBP17.74■□□□□ 0.43
SCAMP2-210ENST00000569124 TRIM71Q2Q1W2 868 aaKnown RBP17.74■□□□□ 0.43
SCAMP2-210ENST00000569124 KCNV1Q6PIU1 500 aa17.74■□□□□ 0.43
SCAMP2-210ENST00000569124 TMTC3Q6ZXV5 915 aa17.74■□□□□ 0.43
SCAMP2-210ENST00000569124 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.74■□□□□ 0.43
SCAMP2-210ENST00000569124 AMHP03971 560 aa17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 HOXD8P13378 290 aaPredicted RBP17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 SMARCA1P28370 1054 aa17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 CDC27P30260 824 aa17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 ADD1P35611 737 aaKnown RBP17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 GHRHRQ02643 423 aa17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 TRIM22Q8IYM9 498 aa17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 STAG2Q8N3U4 1231 aa17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 FBXO22Q8NEZ5 403 aa17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 WNT8BQ93098 351 aa17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 SPATA33Q96N06 139 aa17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 PDCD2LQ9BRP1 358 aa17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 UBE2ZQ9H832 354 aaPredicted RBP17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 MAP3K20Q9NYL2 800 aaKnown RBP17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 INSL6Q9Y581 213 aa17.73■□□□□ 0.43
SCAMP2-210ENST00000569124 OPLAHO14841 1288 aa17.72■□□□□ 0.43
SCAMP2-210ENST00000569124 SORBS3O60504 671 aa17.72■□□□□ 0.43
SCAMP2-210ENST00000569124 PLEKHA8P1O95397 391 aa17.72■□□□□ 0.43
SCAMP2-210ENST00000569124 GGPS1O95749 300 aa17.72■□□□□ 0.43
SCAMP2-210ENST00000569124 ZNF200P98182 395 aaPredicted RBP17.72■□□□□ 0.43
SCAMP2-210ENST00000569124 MBTPS1Q14703 1052 aa17.72■□□□□ 0.43
SCAMP2-210ENST00000569124 CELF3Q5SZQ8 465 aaKnown RBP17.72■□□□□ 0.43
SCAMP2-210ENST00000569124 MYSM1Q5VVJ2 828 aa17.72■□□□□ 0.43
SCAMP2-210ENST00000569124 TRAF7Q6Q0C0 670 aa17.72■□□□□ 0.43
SCAMP2-210ENST00000569124 MYOCDQ8IZQ8 938 aa17.72■□□□□ 0.43
SCAMP2-210ENST00000569124 CCDC82Q8N4S0 544 aa17.72■□□□□ 0.43
SCAMP2-210ENST00000569124 LLPHQ9BRT6 129 aaKnown RBP17.72■□□□□ 0.43
SCAMP2-210ENST00000569124 SPZ1Q9BXG8 430 aa17.72■□□□□ 0.43
SCAMP2-210ENST00000569124 ZBTB5O15062 677 aa17.71■□□□□ 0.43
SCAMP2-210ENST00000569124 PPFIA4O75335 1185 aa17.71■□□□□ 0.43
SCAMP2-210ENST00000569124 IFNAR1P17181 557 aa17.71■□□□□ 0.43
SCAMP2-210ENST00000569124 UBA1P22314 1058 aaKnown RBP17.71■□□□□ 0.43
SCAMP2-210ENST00000569124 THPOP40225 353 aa17.71■□□□□ 0.43
SCAMP2-210ENST00000569124 SSRP1Q08945 709 aaKnown RBP17.71■□□□□ 0.43
SCAMP2-210ENST00000569124 PGM5Q15124 567 aa17.71■□□□□ 0.43
SCAMP2-210ENST00000569124 HSDL1Q3SXM5 330 aa17.71■□□□□ 0.43
SCAMP2-210ENST00000569124 SERINC5Q86VE9 423 aa17.71■□□□□ 0.43
SCAMP2-210ENST00000569124 SAMD3Q8N6K7 520 aa17.71■□□□□ 0.43
SCAMP2-210ENST00000569124 FAM217BQ9NTX9 383 aaPredicted RBP17.71■□□□□ 0.43
SCAMP2-210ENST00000569124 SEC63Q9UGP8 760 aaKnown RBP17.71■□□□□ 0.43
SCAMP2-210ENST00000569124 ARIH1Q9Y4X5 557 aaPredicted RBP17.71■□□□□ 0.43
SCAMP2-210ENST00000569124 PCDHA1Q9Y5I3 950 aa17.71■□□□□ 0.43
SCAMP2-210ENST00000569124 C17orf102A2RUQ5 167 aa17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 RSPH10B2B2RC85 870 aa17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 RGS20O76081 388 aa17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 RSPH10BP0C881 870 aa17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 CCND2P30279 289 aa17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 HOXA13P31271 388 aaPredicted RBP17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 HMGN5P82970 282 aaKnown RBP17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 CUL4AQ13619 759 aa17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 HOMER1Q86YM7 354 aa17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 CMTR1Q8N1G2 835 aaKnown RBP17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 SRBD1Q8N5C6 995 aaKnown RBP17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 RRP36Q96EU6 259 aaKnown RBP17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 INTS4Q96HW7 963 aaKnown RBP17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 C17orf80Q9BSJ5 609 aa17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 RNF26Q9BY78 433 aaPredicted RBP17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 MLXIPQ9HAP2 919 aa17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 SMC3Q9UQE7 1217 aa17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 KIF3AQ9Y496 699 aa17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 CNTNAP5Q8WYK1 1306 aa17.7■□□□□ 0.42
SCAMP2-210ENST00000569124 TTC3P53804 2025 aa17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 FAM86C2PA6NEL3 165 aa17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 GPR37L1O60883 481 aa17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 PPP1R11O60927 126 aaPredicted RBP17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 TGFB3P10600 412 aa17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 KCNA5P22460 613 aa17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 TRAF1Q13077 416 aa17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 HIC1Q14526 733 aa17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 NTRK3Q16288 839 aa17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 PTPROQ16827 1216 aa17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 LEXMQ3ZCV2 418 aa17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 NSUN7Q8NE18 718 aaKnown RBP17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 DBF4BQ8NFT6 615 aa17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 IL31RAQ8NI17 732 aa17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 KHSRPQ92945 711 aaKnown RBP eCLIP17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 ATP6V0A1Q93050 837 aa17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 MTMR8Q96EF0 704 aa17.69■□□□□ 0.42
SCAMP2-210ENST00000569124 SAMD11Q96NU1 681 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms