RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 TNFRSF25Q93038 417 aa14.77□□□□□ -0.05
CNOT1-213ENST00000568158 GJA10Q969M2 543 aa14.77□□□□□ -0.05
CNOT1-213ENST00000568158 LENG9Q96B70 501 aa14.77□□□□□ -0.05
CNOT1-213ENST00000568158 GDF15Q99988 308 aa14.77□□□□□ -0.05
CNOT1-213ENST00000568158 SDF4Q9BRK5 362 aa14.77□□□□□ -0.05
CNOT1-213ENST00000568158 SEZ6LQ9BYH1 1024 aa14.77□□□□□ -0.05
CNOT1-213ENST00000568158 TUT1Q9H6E5 874 aaKnown RBP14.77□□□□□ -0.05
CNOT1-213ENST00000568158 COLQQ9Y215 455 aaPredicted RBP14.77□□□□□ -0.05
CNOT1-213ENST00000568158 CYP3A7-CYP3A51PA0A087WV96 503 aa14.76□□□□□ -0.05
CNOT1-213ENST00000568158 IPO5O00410 1097 aaKnown RBP14.76□□□□□ -0.05
CNOT1-213ENST00000568158 CYP2C9P11712 490 aa14.76□□□□□ -0.05
CNOT1-213ENST00000568158 RAG1P15918 1043 aa14.76□□□□□ -0.05
CNOT1-213ENST00000568158 CYP3A7P24462 503 aa14.76□□□□□ -0.05
CNOT1-213ENST00000568158 ZNF200P98182 395 aaPredicted RBP14.76□□□□□ -0.05
CNOT1-213ENST00000568158 HIC1Q14526 733 aa14.76□□□□□ -0.05
CNOT1-213ENST00000568158 LETM2Q2VYF4 491 aa14.76□□□□□ -0.05
CNOT1-213ENST00000568158 GDF6Q6KF10 455 aaPredicted RBP14.76□□□□□ -0.05
CNOT1-213ENST00000568158 TRIM50Q86XT4 487 aa14.76□□□□□ -0.05
CNOT1-213ENST00000568158 PCYT2Q99447 389 aa14.76□□□□□ -0.05
CNOT1-213ENST00000568158 BRMS1Q9HCU9 246 aa14.76□□□□□ -0.05
CNOT1-213ENST00000568158 JPH1Q9HDC5 661 aaPredicted RBP14.76□□□□□ -0.05
CNOT1-213ENST00000568158 TBX21Q9UL17 535 aa14.76□□□□□ -0.05
CNOT1-213ENST00000568158 TRIP12Q14669 1992 aaPredicted RBP14.76□□□□□ -0.05
CNOT1-213ENST00000568158 ATG7O95352 703 aa14.75□□□□□ -0.05
CNOT1-213ENST00000568158 CCNE2O96020 404 aa14.75□□□□□ -0.05
CNOT1-213ENST00000568158 ACTR2P61160 394 aa14.75□□□□□ -0.05
CNOT1-213ENST00000568158 PTPN11Q06124 597 aaPredicted RBP14.75□□□□□ -0.05
CNOT1-213ENST00000568158 Q4G0T1 1027 aa14.75□□□□□ -0.05
CNOT1-213ENST00000568158 NEK8Q86SG6 692 aa14.75□□□□□ -0.05
CNOT1-213ENST00000568158 C7orf31Q8N865 590 aa14.75□□□□□ -0.05
CNOT1-213ENST00000568158 FBXO18Q8NFZ0 1043 aa14.75□□□□□ -0.05
CNOT1-213ENST00000568158 MBOAT7Q96N66 472 aa14.75□□□□□ -0.05
CNOT1-213ENST00000568158 LBHD1Q9BQE6 289 aaPredicted RBP14.75□□□□□ -0.05
CNOT1-213ENST00000568158 KATNAL1Q9BW62 490 aa14.75□□□□□ -0.05
CNOT1-213ENST00000568158 PPP1R12CQ9BZL4 782 aa14.75□□□□□ -0.05
CNOT1-213ENST00000568158 RNPEPQ9H4A4 650 aa14.75□□□□□ -0.05
CNOT1-213ENST00000568158 CEP290O15078 2479 aa14.75□□□□□ -0.05
CNOT1-213ENST00000568158 UMODL1Q5DID0 1318 aa14.74□□□□□ -0.05
CNOT1-213ENST00000568158 TIMP1P01033 207 aa14.74□□□□□ -0.05
CNOT1-213ENST00000568158 GJB2P29033 226 aa14.74□□□□□ -0.05
CNOT1-213ENST00000568158 CYP2C18P33260 490 aa14.74□□□□□ -0.05
CNOT1-213ENST00000568158 SETQ01105 290 aaPredicted RBP14.74□□□□□ -0.05
CNOT1-213ENST00000568158 SAFBQ15424 915 aaKnown RBP eCLIP14.74□□□□□ -0.05
CNOT1-213ENST00000568158 PTGISQ16647 500 aa14.74□□□□□ -0.05
CNOT1-213ENST00000568158 ABHD15Q6UXT9 468 aa14.74□□□□□ -0.05
CNOT1-213ENST00000568158 SESTD1Q86VW0 696 aa14.74□□□□□ -0.05
CNOT1-213ENST00000568158 GLG1Q92896 1179 aa14.74□□□□□ -0.05
CNOT1-213ENST00000568158 TBC1D22BQ9NU19 505 aa14.74□□□□□ -0.05
CNOT1-213ENST00000568158 GTF2IRD1Q9UHL9 959 aa14.74□□□□□ -0.05
CNOT1-213ENST00000568158 WNT7AO00755 349 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 SLC37A4O43826 429 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 CCNT1O60563 726 aaKnown RBP14.73□□□□□ -0.05
CNOT1-213ENST00000568158 LGR5O75473 907 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 SUPT20HL2P0C7V6 817 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 SMIM10L2AP0DMW4 78 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 SMIM10L2BP0DMW5 78 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 ATP2B1P20020 1258 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 MARK3P27448 753 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 CCL23P55773 120 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 CUL4AQ13619 759 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 MOXD1Q6UVY6 613 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 SLC5A5Q92911 643 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 CTAGE1Q96RT6 745 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 PRO3102Q9H379 93 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 SMARCAD1Q9H4L7 1026 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 SETD4Q9NVD3 440 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 DDX25Q9UHL0 483 aaKnown RBP14.73□□□□□ -0.05
CNOT1-213ENST00000568158 SMC3Q9UQE7 1217 aa14.73□□□□□ -0.05
CNOT1-213ENST00000568158 KAT6AQ92794 2004 aa14.72□□□□□ -0.05
CNOT1-213ENST00000568158 RBAK-RBAKDNI3L0D1 243 aa14.72□□□□□ -0.05
CNOT1-213ENST00000568158 PSMD10O75832 226 aa14.72□□□□□ -0.05
CNOT1-213ENST00000568158 BMP8BP34820 402 aa14.72□□□□□ -0.05
CNOT1-213ENST00000568158 STAT5BP51692 787 aa14.72□□□□□ -0.05
CNOT1-213ENST00000568158 PPP4R3AQ6IN85 833 aa14.72□□□□□ -0.05
CNOT1-213ENST00000568158 MFSD5Q6N075 450 aa14.72□□□□□ -0.05
CNOT1-213ENST00000568158 SWSAP1Q6NVH7 229 aa14.72□□□□□ -0.05
CNOT1-213ENST00000568158 NOC4LQ9BVI4 516 aaKnown RBP14.72□□□□□ -0.05
CNOT1-213ENST00000568158 UBE2OQ9C0C9 1292 aaKnown RBP14.72□□□□□ -0.05
CNOT1-213ENST00000568158 HIPK3Q9H422 1215 aa14.72□□□□□ -0.05
CNOT1-213ENST00000568158 NOD1Q9Y239 953 aa14.72□□□□□ -0.05
CNOT1-213ENST00000568158 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.72□□□□□ -0.05
CNOT1-213ENST00000568158 IGKV6D-21A0A0A0MT36 114 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 C17orf102A2RUQ5 167 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 KIF28PB7ZC32 967 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 TREHO43280 583 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 GAS7O60861 476 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 EPHB4P54760 987 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 LRCH2Q5VUJ6 765 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 ZNF746Q6NUN9 644 aaPredicted RBP14.71□□□□□ -0.05
CNOT1-213ENST00000568158 ETNPPLQ8TBG4 499 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 DHX38Q92620 1227 aaKnown RBP14.71□□□□□ -0.05
CNOT1-213ENST00000568158 SCLYQ96I15 445 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 RIT2Q99578 217 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 TEKT3Q9BXF9 490 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 FOXP1Q9H334 677 aaPredicted RBP14.71□□□□□ -0.05
CNOT1-213ENST00000568158 UNC45AQ9H3U1 944 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 AZI2Q9H6S1 392 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 FOXD4L1Q9NU39 408 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 ERAP1Q9NZ08 941 aa14.71□□□□□ -0.05
CNOT1-213ENST00000568158 ZNF215Q9UL58 517 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms