RNA–Protein interactions for RNA: ENST00000567705.5

INO80E-210, Transcript of INO80 complex subunit E, human

TSL 3 BASIC

Gene INO80E, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80E-210	ENST00000567705	TMEM39A	Q9NV64	488 aa		18.83	■□□□□ 0.6
INO80E-210	ENST00000567705	SLC9A2	Q9UBY0	812 aa		18.83	■□□□□ 0.6
INO80E-210	ENST00000567705	NOP56	O00567	594 aa	Known RBP	18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	SOX1	O00570	391 aa	Predicted RBP	18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	MSH4	O15457	936 aa		18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	TCF7	P36402	384 aa	Predicted RBP	18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	INF2	Q27J81	1249 aa		18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	LRIT3	Q3SXY7	679 aa		18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	PPP4R3A	Q6IN85	833 aa		18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	GDF6	Q6KF10	455 aa	Predicted RBP	18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	TRIM50	Q86XT4	487 aa		18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	FBXO18	Q8NFZ0	1043 aa		18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	ETNPPL	Q8TBG4	499 aa		18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	PPP1R13L	Q8WUF5	828 aa		18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	SLC5A5	Q92911	643 aa		18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	NOC4L	Q9BVI4	516 aa	Known RBP	18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	HDAC6	Q9UBN7	1215 aa		18.82	■□□□□ 0.6
INO80E-210	ENST00000567705	FAM205C	A6NFA0	338 aa		18.81	■□□□□ 0.6
INO80E-210	ENST00000567705	BTBD18	B2RXH4	712 aa		18.81	■□□□□ 0.6
INO80E-210	ENST00000567705	TLR3	O15455	904 aa	Known RBP	18.81	■□□□□ 0.6
INO80E-210	ENST00000567705	TDP2	O95551	362 aa		18.81	■□□□□ 0.6
INO80E-210	ENST00000567705	KRT2	P35908	639 aa		18.81	■□□□□ 0.6
INO80E-210	ENST00000567705	ZNF76	P36508	570 aa		18.81	■□□□□ 0.6
INO80E-210	ENST00000567705	ACTR2	P61160	394 aa		18.81	■□□□□ 0.6
INO80E-210	ENST00000567705	RBL2	Q08999	1139 aa		18.81	■□□□□ 0.6
INO80E-210	ENST00000567705	CUL4A	Q13619	759 aa		18.81	■□□□□ 0.6
INO80E-210	ENST00000567705	PRR16	Q569H4	304 aa		18.81	■□□□□ 0.6
INO80E-210	ENST00000567705	ABHD15	Q6UXT9	468 aa		18.81	■□□□□ 0.6
INO80E-210	ENST00000567705	BAD	Q92934	168 aa		18.81	■□□□□ 0.6
INO80E-210	ENST00000567705	TBC1D22B	Q9NU19	505 aa		18.81	■□□□□ 0.6
INO80E-210	ENST00000567705	PKD2L1	Q9P0L9	805 aa		18.81	■□□□□ 0.6
INO80E-210	ENST00000567705	UMODL1	Q5DID0	1318 aa		18.8	■□□□□ 0.6
INO80E-210	ENST00000567705	PSMD10	O75832	226 aa		18.8	■□□□□ 0.6
INO80E-210	ENST00000567705	SUPT20HL2	P0C7V6	817 aa		18.8	■□□□□ 0.6
INO80E-210	ENST00000567705	MFSD5	Q6N075	450 aa		18.8	■□□□□ 0.6
INO80E-210	ENST00000567705	DIS3L2	Q8IYB7	885 aa	Known RBP	18.8	■□□□□ 0.6
INO80E-210	ENST00000567705	DHX38	Q92620	1227 aa	Known RBP	18.8	■□□□□ 0.6
INO80E-210	ENST00000567705	RIT2	Q99578	217 aa		18.8	■□□□□ 0.6
INO80E-210	ENST00000567705	SDF4	Q9BRK5	362 aa		18.8	■□□□□ 0.6
INO80E-210	ENST00000567705	ZNF577	Q9BSK1	485 aa		18.8	■□□□□ 0.6
INO80E-210	ENST00000567705	WNT8A	Q9H1J5	351 aa		18.8	■□□□□ 0.6
INO80E-210	ENST00000567705	KCNMB3	Q9NPA1	279 aa		18.8	■□□□□ 0.6
INO80E-210	ENST00000567705	PRDM5	Q9NQX1	630 aa	Predicted RBP	18.8	■□□□□ 0.6
INO80E-210	ENST00000567705	SLC37A4	O43826	429 aa		18.79	■□□□□ 0.6
INO80E-210	ENST00000567705	TRIM71	Q2Q1W2	868 aa	Known RBP	18.79	■□□□□ 0.6
INO80E-210	ENST00000567705	ZNF746	Q6NUN9	644 aa	Predicted RBP	18.79	■□□□□ 0.6
INO80E-210	ENST00000567705	PIK3AP1	Q6ZUJ8	805 aa		18.79	■□□□□ 0.6
INO80E-210	ENST00000567705	NEK8	Q86SG6	692 aa		18.79	■□□□□ 0.6
INO80E-210	ENST00000567705	AFAP1L1	Q8TED9	768 aa		18.79	■□□□□ 0.6
INO80E-210	ENST00000567705	LRCH3	Q96II8	777 aa		18.79	■□□□□ 0.6
INO80E-210	ENST00000567705	RNPEP	Q9H4A4	650 aa		18.79	■□□□□ 0.6
INO80E-210	ENST00000567705	CCDC194	A0A1B0GVG4	234 aa		18.78	■□□□□ 0.6
INO80E-210	ENST00000567705	PITPNM1	O00562	1244 aa		18.78	■□□□□ 0.6
INO80E-210	ENST00000567705	WNT7A	O00755	349 aa		18.78	■□□□□ 0.6
INO80E-210	ENST00000567705	CYP2C9	P11712	490 aa		18.78	■□□□□ 0.6
INO80E-210	ENST00000567705	GCFC2	P16383	781 aa	Known RBP	18.78	■□□□□ 0.6
INO80E-210	ENST00000567705	EPHB4	P54760	987 aa		18.78	■□□□□ 0.6
INO80E-210	ENST00000567705	SP4	Q02446	784 aa		18.78	■□□□□ 0.6
INO80E-210	ENST00000567705	TRAF7	Q6Q0C0	670 aa		18.78	■□□□□ 0.6
INO80E-210	ENST00000567705	C16orf59	Q7L2K0	433 aa		18.78	■□□□□ 0.6
INO80E-210	ENST00000567705	PLPPR4	Q7Z2D5	763 aa		18.78	■□□□□ 0.6
INO80E-210	ENST00000567705	SMIM10L2A	P0DMW4	78 aa		18.77	■□□□□ 0.6
INO80E-210	ENST00000567705	SMIM10L2B	P0DMW5	78 aa		18.77	■□□□□ 0.6
INO80E-210	ENST00000567705	RAG1	P15918	1043 aa		18.77	■□□□□ 0.6
INO80E-210	ENST00000567705	PTGIS	Q16647	500 aa		18.77	■□□□□ 0.6
INO80E-210	ENST00000567705	GPR153	Q6NV75	609 aa		18.77	■□□□□ 0.6
INO80E-210	ENST00000567705	SERINC5	Q86VE9	423 aa		18.77	■□□□□ 0.6
INO80E-210	ENST00000567705	C7orf31	Q8N865	590 aa		18.77	■□□□□ 0.6
INO80E-210	ENST00000567705	WNT8B	Q93098	351 aa		18.77	■□□□□ 0.6
INO80E-210	ENST00000567705	C8orf76	Q96K31	380 aa		18.77	■□□□□ 0.6
INO80E-210	ENST00000567705	FOXP1	Q9H334	677 aa	Predicted RBP	18.77	■□□□□ 0.6
INO80E-210	ENST00000567705	HIPK3	Q9H422	1215 aa		18.77	■□□□□ 0.6
INO80E-210	ENST00000567705	SMARCAD1	Q9H4L7	1026 aa		18.77	■□□□□ 0.6
INO80E-210	ENST00000567705	ERAP1	Q9NZ08	941 aa		18.77	■□□□□ 0.6
INO80E-210	ENST00000567705	ZNF215	Q9UL58	517 aa	Predicted RBP	18.77	■□□□□ 0.6
INO80E-210	ENST00000567705	ATP4A	P20648	1035 aa		18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	U2AF2	P26368	475 aa	Known RBP eCLIP	18.76	■□□□□ 0.59	8e-9	■■■□□ 17.2
INO80E-210	ENST00000567705	CYP2C18	P33260	490 aa		18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	ZNF200	P98182	395 aa	Predicted RBP	18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	KRT76	Q01546	638 aa		18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	GPNMB	Q14956	572 aa		18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	LETM2	Q2VYF4	491 aa		18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	FAM47C	Q5HY64	1035 aa		18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	MARCH8	Q5T0T0	291 aa		18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	UTP14C	Q5TAP6	766 aa	Known RBP	18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	CCDC60	Q8IWA6	550 aa	Predicted RBP	18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	SMAP1	Q8IYB5	467 aa	Predicted RBP	18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	HAS1	Q92839	578 aa		18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	GJA10	Q969M2	543 aa		18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	BRMS1	Q9HCU9	246 aa		18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	DDX25	Q9UHL0	483 aa	Known RBP	18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	MAFB	Q9Y5Q3	323 aa	Predicted RBP	18.76	■□□□□ 0.59
INO80E-210	ENST00000567705	MBLAC1	A4D2B0	266 aa	Predicted RBP	18.75	■□□□□ 0.59
INO80E-210	ENST00000567705	TBX3	O15119	743 aa		18.75	■□□□□ 0.59
INO80E-210	ENST00000567705	SLC26A2	P50443	739 aa		18.75	■□□□□ 0.59
INO80E-210	ENST00000567705	GUCY1B3	Q02153	619 aa		18.75	■□□□□ 0.59
INO80E-210	ENST00000567705	PTK7	Q13308	1070 aa		18.75	■□□□□ 0.59
INO80E-210	ENST00000567705	TRIM29	Q14134	588 aa		18.75	■□□□□ 0.59
INO80E-210	ENST00000567705	LMBR1	Q8WVP7	490 aa		18.75	■□□□□ 0.59
INO80E-210	ENST00000567705	FAM20A	Q96MK3	541 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms