RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 WNT8AQ9H1J5 351 aa11.94□□□□□ -0.5
LINC00564-201ENST00000567258 TTYH1Q9H313 450 aaPredicted RBP11.94□□□□□ -0.5
LINC00564-201ENST00000567258 SH2B2O14492 632 aaPredicted RBP11.93□□□□□ -0.5
LINC00564-201ENST00000567258 TLL1O43897 1013 aa11.93□□□□□ -0.5
LINC00564-201ENST00000567258 CDC45O75419 566 aa11.93□□□□□ -0.5
LINC00564-201ENST00000567258 PARNO95453 639 aaKnown RBP11.93□□□□□ -0.5
LINC00564-201ENST00000567258 GGPS1O95749 300 aa11.93□□□□□ -0.5
LINC00564-201ENST00000567258 NEDD9Q14511 834 aa11.93□□□□□ -0.5
LINC00564-201ENST00000567258 KRT32Q14532 448 aa11.93□□□□□ -0.5
LINC00564-201ENST00000567258 NECTIN1Q15223 517 aa11.93□□□□□ -0.5
LINC00564-201ENST00000567258 KIAA0753Q2KHM9 967 aa11.93□□□□□ -0.5
LINC00564-201ENST00000567258 CELF3Q5SZQ8 465 aaKnown RBP11.93□□□□□ -0.5
LINC00564-201ENST00000567258 RASIP1Q5U651 963 aa11.93□□□□□ -0.5
LINC00564-201ENST00000567258 AFAP1L1Q8TED9 768 aa11.93□□□□□ -0.5
LINC00564-201ENST00000567258 PPP1R13LQ8WUF5 828 aa11.93□□□□□ -0.5
LINC00564-201ENST00000567258 NEK1Q96PY6 1258 aa11.93□□□□□ -0.5
LINC00564-201ENST00000567258 PBX4Q9BYU1 374 aa11.93□□□□□ -0.5
LINC00564-201ENST00000567258 EHMT1Q9H9B1 1298 aa11.93□□□□□ -0.5
LINC00564-201ENST00000567258 A0A0C4DFX4 3053 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 GRXCR1A8MXD5 290 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 KIF28PB7ZC32 967 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 SORBS3O60504 671 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 DGAT1O75907 488 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 ZNF286BP0CG31 522 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 ATP2A2P16615 1042 aaKnown RBP11.92□□□□□ -0.5
LINC00564-201ENST00000567258 KCNJ6P48051 423 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 MYSM1Q5VVJ2 828 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 XRRA1Q6P2D8 792 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 ZNF598Q86UK7 904 aaKnown RBP11.92□□□□□ -0.5
LINC00564-201ENST00000567258 NLRX1Q86UT6 975 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 SESTD1Q86VW0 696 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00564-201ENST00000567258 CCDC82Q8N4S0 544 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 FANCBQ8NB91 859 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 GIMAP8Q8ND71 665 aaPredicted RBP11.92□□□□□ -0.5
LINC00564-201ENST00000567258 PSTPIP2Q9H939 334 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 CXXC1Q9P0U4 656 aaPredicted RBP11.92□□□□□ -0.5
LINC00564-201ENST00000567258 TET1Q8NFU7 2136 aa11.92□□□□□ -0.5
LINC00564-201ENST00000567258 SPDYE3A6NKU9 549 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 FIBPO43427 364 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 PLEKHA8P1O95397 391 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 NEFLP07196 543 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 HMGB1P09429 215 aaKnown RBP11.91□□□□□ -0.5
LINC00564-201ENST00000567258 IQCF3P0C7M6 154 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 SELPP16109 830 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 RXRAP19793 462 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 UBA1P22314 1058 aaKnown RBP11.91□□□□□ -0.5
LINC00564-201ENST00000567258 GRIN2CQ14957 1233 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 GDF6Q6KF10 455 aaPredicted RBP11.91□□□□□ -0.5
LINC00564-201ENST00000567258 MICU3Q86XE3 530 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 IL31RAQ8NI17 732 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 USP26Q9BXU7 913 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 RBM28Q9NW13 759 aaKnown RBP11.91□□□□□ -0.5
LINC00564-201ENST00000567258 RTEL1Q9NZ71 1219 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 HDAC6Q9UBN7 1215 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 GTF2IRD1Q9UHL9 959 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 NAP1L2Q9ULW6 460 aaPredicted RBP11.91□□□□□ -0.5
LINC00564-201ENST00000567258 PCDHA11Q9Y5I1 949 aa11.91□□□□□ -0.5
LINC00564-201ENST00000567258 PIK3CDO00329 1044 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 F2P00734 622 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 GNAT1P11488 350 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 PTK7Q13308 1070 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 SLC35G1Q2M3R5 365 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 HSDL1Q3SXM5 330 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 PCNX4Q63HM2 1172 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 PPP2R2DQ66LE6 453 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 USP17L6PQ6QN14 398 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 LRRC8DQ7L1W4 858 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 DHX32Q7L7V1 743 aaKnown RBP11.9□□□□□ -0.5
LINC00564-201ENST00000567258 HEATR3Q7Z4Q2 680 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 SGMS1Q86VZ5 419 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 RAB11FIP4Q86YS3 637 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 CMTR1Q8N1G2 835 aaKnown RBP11.9□□□□□ -0.5
LINC00564-201ENST00000567258 SRBD1Q8N5C6 995 aaKnown RBP11.9□□□□□ -0.5
LINC00564-201ENST00000567258 KAT2BQ92831 832 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 CDHR1Q96JP9 859 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 SLC9A7Q96T83 725 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 NKX2-4Q9H2Z4 354 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 PRDM12Q9H4Q4 367 aa11.9□□□□□ -0.5
LINC00564-201ENST00000567258 ZNF215Q9UL58 517 aaPredicted RBP11.9□□□□□ -0.5
LINC00564-201ENST00000567258 C17orf102A2RUQ5 167 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 H3BRB1 525 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 ZBTB43O43298 467 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 BAIAP3O94812 1187 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 IGFBP4P22692 258 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 ICAM3P32942 547 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 PRR20EP86478 221 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 PRR20CP86479 221 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 PRR20DP86480 221 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 PRR20BP86481 221 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 PRR20AP86496 221 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 SP2Q02086 613 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 METTL7BQ6UX53 244 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 CYFIP1Q7L576 1253 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 PHOSPHO2Q8TCD6 241 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 INPP4AQ96PE3 977 aaPredicted RBP11.89□□□□□ -0.51
LINC00564-201ENST00000567258 TUT1Q9H6E5 874 aaKnown RBP11.89□□□□□ -0.51
LINC00564-201ENST00000567258 EYSQ5T1H1 3165 aa11.89□□□□□ -0.51
LINC00564-201ENST00000567258 UNC80Q8N2C7 3258 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms