RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 YBX3P16989 372 aaKnown RBP eCLIP6.5□□□□□ -1.372e-7■■■□□ 14.8
CNOT1-211ENST00000567188 GNA11P29992 359 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 MTMR2Q13614 643 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 IQUBQ8NA54 791 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 B4GALNT2Q8NHY0 566 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 KLHL29Q96CT2 875 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 CHAMP1Q96JM3 812 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 CCDC42Q96M95 316 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 SH2D4AQ9H788 454 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 ATP6V0A4Q9HBG4 840 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 DDX60Q8IY21 1712 aaKnown RBP6.5□□□□□ -1.37
CNOT1-211ENST00000567188 RASGRF2O14827 1237 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 HPDP32754 393 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-211ENST00000567188 KCNJ6P48051 423 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 IFT88Q13099 833 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 LETM2Q2VYF4 491 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 GNPTABQ3T906 1256 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 TDRD12Q587J7 1177 aaKnown RBP6.5□□□□□ -1.37
CNOT1-211ENST00000567188 LRRC8AQ8IWT6 810 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 TBC1D23Q9NUY8 699 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 ZNRF3Q9ULT6 936 aa6.5□□□□□ -1.37
CNOT1-211ENST00000567188 ARIH1Q9Y4X5 557 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-211ENST00000567188 A0A1B0GW55 424 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 BRD1O95696 1058 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 DUX4L2P0CJ85 424 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 DUX4L3P0CJ86 424 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 DUX4L4P0CJ87 422 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 DUX4L5P0CJ88 424 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 DUX4L6P0CJ89 424 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 DUX4L7P0CJ90 424 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 STAT6P42226 847 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 EVX2Q03828 476 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 CFAP221Q4G0U5 840 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 HSP90AA4PQ58FG1 418 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 HIBCHQ6NVY1 386 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-211ENST00000567188 EMBQ6PCB8 327 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 SH3GL2Q99962 352 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 OSBPL1AQ9BXW6 950 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 DUX4Q9UBX2 424 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 ENO4A6NNW6 628 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 ANKRD20A3Q5VUR7 823 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 MCF2L2Q86YR7 1114 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 MSANTD4Q8NCY6 345 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 CXorf38Q8TB03 319 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 UBLCP1Q8WVY7 318 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-211ENST00000567188 ZBTB9Q96C00 473 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 LZTS2Q9BRK4 669 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 SPC25Q9HBM1 224 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 COPRSQ9NQ92 184 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 BIN1O00499 593 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 PLSCR1O15162 318 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 PSMC1P62191 440 aaKnown RBP6.49□□□□□ -1.37
CNOT1-211ENST00000567188 CUL4BQ13620 913 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 ADRM1Q16186 407 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 CCDC122Q5T0U0 273 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 NAIF1Q69YI7 327 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-211ENST00000567188 LRRC43Q8N309 656 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 MPP4Q96JB8 637 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 TBC1D7Q9P0N9 293 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 TCP1P17987 556 aaKnown RBP6.49□□□□□ -1.37
CNOT1-211ENST00000567188 IREB2P48200 963 aaKnown RBP6.49□□□□□ -1.37
CNOT1-211ENST00000567188 EIF3BP55884 814 aaKnown RBP6.49□□□□□ -1.37
CNOT1-211ENST00000567188 OCA2Q04671 838 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 ELMSAN1Q6PJG2 1045 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 GSDMBQ8TAX9 411 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 GLIS2Q9BZE0 524 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-211ENST00000567188 TESPA1A2RU30 521 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-211ENST00000567188 MYL3P08590 195 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 SLC1A4P43007 532 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 TRIM60Q495X7 471 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 MAP1SQ66K74 1059 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-211ENST00000567188 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.49□□□□□ -1.373e-9■□□□□ 10.6
CNOT1-211ENST00000567188 E9PMD0 336 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 S100A1P23297 94 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 TM4SF1P30408 202 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 NDUFA5Q16718 116 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 ZMYM1Q5SVZ6 1142 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 ANO1Q5XXA6 986 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 NSMFQ6X4W1 530 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 TRPM4Q8TD43 1214 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 NOD1Q9Y239 953 aa6.49□□□□□ -1.37
CNOT1-211ENST00000567188 GRIN3BO60391 1043 aa6.48□□□□□ -1.37
CNOT1-211ENST00000567188 PLEKHA8P1O95397 391 aa6.48□□□□□ -1.37
CNOT1-211ENST00000567188 CC2D2BQ6DHV5 1058 aa6.48□□□□□ -1.37
CNOT1-211ENST00000567188 GAS2L3Q86XJ1 694 aa6.48□□□□□ -1.37
CNOT1-211ENST00000567188 WDR75Q8IWA0 830 aaKnown RBP6.48□□□□□ -1.37
CNOT1-211ENST00000567188 SEPT8Q92599 483 aa6.48□□□□□ -1.37
CNOT1-211ENST00000567188 BICD1Q96G01 975 aa6.48□□□□□ -1.37
CNOT1-211ENST00000567188 CCPG1Q9ULG6 757 aa6.48□□□□□ -1.37
CNOT1-211ENST00000567188 SAR1BQ9Y6B6 198 aa6.48□□□□□ -1.37
CNOT1-211ENST00000567188 ASTN2O75129 1339 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-211ENST00000567188 TBCAO75347 108 aaKnown RBP6.48□□□□□ -1.37
CNOT1-211ENST00000567188 CSF1RP07333 972 aa6.48□□□□□ -1.37
CNOT1-211ENST00000567188 MARK3P27448 753 aa6.48□□□□□ -1.37
CNOT1-211ENST00000567188 HNRNPH1P31943 449 aaKnown RBP6.48□□□□□ -1.37
CNOT1-211ENST00000567188 STX3Q13277 289 aa6.48□□□□□ -1.37
CNOT1-211ENST00000567188 CLEC17AQ6ZS10 378 aa6.48□□□□□ -1.37
CNOT1-211ENST00000567188 GPIHBP1Q8IV16 184 aa6.48□□□□□ -1.37
CNOT1-211ENST00000567188 ZFPM1Q8IX07 1006 aa6.48□□□□□ -1.37
CNOT1-211ENST00000567188 BBOF1Q8ND07 529 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms