RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 TTMPQ5BVD1 217 aa7.13□□□□□ -1.27
GINS3-206ENST00000567143 CFAP58Q5T655 872 aa7.13□□□□□ -1.27
GINS3-206ENST00000567143 C12orf60Q5U649 245 aa7.13□□□□□ -1.27
GINS3-206ENST00000567143 HAUS3Q68CZ6 603 aa7.13□□□□□ -1.27
GINS3-206ENST00000567143 USP17L6PQ6QN14 398 aa7.13□□□□□ -1.27
GINS3-206ENST00000567143 MTMR14Q8NCE2 650 aa7.13□□□□□ -1.27
GINS3-206ENST00000567143 LARP4BQ92615 738 aaKnown RBP7.13□□□□□ -1.27
GINS3-206ENST00000567143 TLR10Q9BXR5 811 aa7.13□□□□□ -1.27
GINS3-206ENST00000567143 TTYH3Q9C0H2 523 aa7.13□□□□□ -1.27
GINS3-206ENST00000567143 SH2D4AQ9H788 454 aa7.13□□□□□ -1.27
GINS3-206ENST00000567143 C6orf50Q9HD87 102 aa7.13□□□□□ -1.27
GINS3-206ENST00000567143 ATP8A2Q9NTI2 1148 aa7.13□□□□□ -1.27
GINS3-206ENST00000567143 STIM2Q9P246 746 aa7.13□□□□□ -1.27
GINS3-206ENST00000567143 A0A1W2PQC6 194 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 GLTPD2A6NH11 291 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 ORC4O43929 436 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 CEP104O60308 925 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 ERLIN2O94905 339 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 MAGEA9P43362 315 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 CACNB3P54284 484 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 TUBB2AQ13885 445 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 NBPF9Q3BBW0 867 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 CEP85LQ5SZL2 805 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 CNNM4Q6P4Q7 775 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 TBC1D16Q8TBP0 767 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 KAT2BQ92831 832 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 DHTKD1Q96HY7 919 aaPredicted RBP7.12□□□□□ -1.27
GINS3-206ENST00000567143 GMLQ99445 158 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 TUBB2BQ9BVA1 445 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 KIAA1024Q9UPX6 916 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 SUGT1Q9Y2Z0 365 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 CAPN7Q9Y6W3 813 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 FLT1P17948 1338 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 A0A087X0T9 212 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 FAM228BP0C875 321 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 RASA1P20936 1047 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 CDK8P49336 464 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 SCNN1DP51172 638 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 ZNF280AP59817 542 aaPredicted RBP7.12□□□□□ -1.27
GINS3-206ENST00000567143 GPSM2P81274 684 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 IKQ13123 557 aaPredicted RBP7.12□□□□□ -1.27
GINS3-206ENST00000567143 GRB10Q13322 594 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 PLS1Q14651 629 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 MEA1Q16626 185 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 KRT79Q5XKE5 535 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 GJB7Q6PEY0 223 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 FAM114A1Q8IWE2 563 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 GPC2Q8N158 579 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 ZBED3Q96IU2 234 aaPredicted RBP7.12□□□□□ -1.27
GINS3-206ENST00000567143 NOX5Q96PH1 765 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 DPH5Q9H2P9 285 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 BLOC1S4Q9NUP1 217 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 MYH7P12883 1935 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 POTEB3A0JP26 581 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 POTECB2RU33 542 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 C6orf229H3BNL8 230 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 VIL1P09327 827 aaKnown RBP7.12□□□□□ -1.27
GINS3-206ENST00000567143 ABCB4P21439 1286 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 FECHP22830 423 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 RCAN1P53805 252 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 CORO7P57737 925 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 AMPD3Q01432 767 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 KLHL30Q0D2K2 578 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 GRM4Q14833 912 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 FAM83BQ5T0W9 1011 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 IQCEQ6IPM2 695 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 POTEBQ6S5H4 581 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 FBXO33Q7Z6M2 555 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 TADA2BQ86TJ2 420 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 RNPC3Q96LT9 517 aaKnown RBP7.12□□□□□ -1.27
GINS3-206ENST00000567143 SPAG5Q96R06 1193 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 COA1Q9GZY4 146 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 DDX47Q9H0S4 455 aaKnown RBP7.12□□□□□ -1.27
GINS3-206ENST00000567143 MKRN1Q9UHC7 482 aaKnown RBP7.12□□□□□ -1.27
GINS3-206ENST00000567143 PLAGL2Q9UPG8 496 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 SCN9AQ15858 1988 aa7.12□□□□□ -1.27
GINS3-206ENST00000567143 COL2A1P02458 1487 aaPredicted RBP7.12□□□□□ -1.27
GINS3-206ENST00000567143 E7EVH7 732 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 CLIC2O15247 247 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 UFL1O94874 794 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 TMOD1P28289 359 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 IFT88Q13099 833 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 GPR162Q16538 588 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 CHADLQ6NUI6 762 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 DPP8Q6V1X1 898 aaPredicted RBP7.11□□□□□ -1.27
GINS3-206ENST00000567143 CCDC170Q8IYT3 715 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 RDH13Q8NBN7 331 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 PYM1Q9BRP8 204 aaKnown RBP7.11□□□□□ -1.27
GINS3-206ENST00000567143 NUP58Q9BVL2 599 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 CCSER1Q9C0I3 900 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 GOPCQ9HD26 462 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 ZNF219Q9P2Y4 722 aaPredicted RBP7.11□□□□□ -1.27
GINS3-206ENST00000567143 POLLQ9UGP5 575 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.11□□□□□ -1.27
GINS3-206ENST00000567143 FOCADQ5VW36 1801 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 MYH6P13533 1939 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 MYO3BQ8WXR4 1341 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 TLDC2A0PJX2 215 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 POTEFA5A3E0 1075 aa7.11□□□□□ -1.27
GINS3-206ENST00000567143 TLR2O60603 784 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms