RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 NCOR1O75376 2440 aa31.73■■■□□ 2.67
UBFD1-206ENST00000566669 LCHNA4D1U4 455 aa31.72■■■□□ 2.67
UBFD1-206ENST00000566669 HMGB1P09429 215 aaKnown RBP31.72■■■□□ 2.67
UBFD1-206ENST00000566669 KCNA2P16389 499 aa31.72■■■□□ 2.67
UBFD1-206ENST00000566669 ARHGAP4P98171 946 aa31.72■■■□□ 2.67
UBFD1-206ENST00000566669 HEATR3Q7Z4Q2 680 aa31.72■■■□□ 2.67
UBFD1-206ENST00000566669 CMTR1Q8N1G2 835 aaKnown RBP31.72■■■□□ 2.67
UBFD1-206ENST00000566669 LINC01553A4QN01 128 aa31.71■■■□□ 2.67
UBFD1-206ENST00000566669 FOSP01100 380 aaPredicted RBP31.71■■■□□ 2.67
UBFD1-206ENST00000566669 ITGB5P18084 799 aa31.71■■■□□ 2.67
UBFD1-206ENST00000566669 RCAN1P53805 252 aa31.71■■■□□ 2.67
UBFD1-206ENST00000566669 HTRA4P83105 476 aaPredicted RBP31.71■■■□□ 2.67
UBFD1-206ENST00000566669 TCTN1Q2MV58 587 aa31.71■■■□□ 2.67
UBFD1-206ENST00000566669 APOA5Q6Q788 366 aa31.71■■■□□ 2.67
UBFD1-206ENST00000566669 DHX32Q7L7V1 743 aaKnown RBP31.71■■■□□ 2.67
UBFD1-206ENST00000566669 TRIM50Q86XT4 487 aa31.71■■■□□ 2.67
UBFD1-206ENST00000566669 MYOCDQ8IZQ8 938 aa31.71■■■□□ 2.67
UBFD1-206ENST00000566669 LMBR1Q8WVP7 490 aa31.71■■■□□ 2.67
UBFD1-206ENST00000566669 HLA-CQ95604 372 aa31.71■■■□□ 2.67
UBFD1-206ENST00000566669 SMARCAD1Q9H4L7 1026 aa31.71■■■□□ 2.67
UBFD1-206ENST00000566669 JADE2Q9NQC1 790 aa31.71■■■□□ 2.67
UBFD1-206ENST00000566669 PCDHA6Q9UN73 950 aa31.71■■■□□ 2.67
UBFD1-206ENST00000566669 PCDHA8Q9Y5H6 950 aa31.71■■■□□ 2.67
UBFD1-206ENST00000566669 LPXNO60711 386 aa31.7■■■□□ 2.67
UBFD1-206ENST00000566669 SP4Q02446 784 aa31.7■■■□□ 2.67
UBFD1-206ENST00000566669 TMCO2Q7Z6W1 182 aaPredicted RBP31.7■■■□□ 2.67
UBFD1-206ENST00000566669 CCDC82Q8N4S0 544 aa31.7■■■□□ 2.67
UBFD1-206ENST00000566669 MUC3AQ02505 3323 aa31.7■■■□□ 2.66
UBFD1-206ENST00000566669 BMP1P13497 986 aa31.69■■■□□ 2.66
UBFD1-206ENST00000566669 LIN28BQ6ZN17 250 aaKnown RBP eCLIP31.69■■■□□ 2.66
UBFD1-206ENST00000566669 SP7Q8TDD2 431 aaPredicted RBP31.69■■■□□ 2.66
UBFD1-206ENST00000566669 GLG1Q92896 1179 aa31.68■■■□□ 2.66
UBFD1-206ENST00000566669 TOP1MTQ969P6 601 aa31.68■■■□□ 2.66
UBFD1-206ENST00000566669 LRRC2Q9BYS8 371 aa31.68■■■□□ 2.66
UBFD1-206ENST00000566669 SUGCTQ9HAC7 445 aa31.68■■■□□ 2.66
UBFD1-206ENST00000566669 PTPRSQ13332 1948 aa31.68■■■□□ 2.66
UBFD1-206ENST00000566669 BDP1A6H8Y1 2624 aa31.68■■■□□ 2.66
UBFD1-206ENST00000566669 ZBTB43O43298 467 aa31.67■■■□□ 2.66
UBFD1-206ENST00000566669 ATP9AO75110 1047 aa31.67■■■□□ 2.66
UBFD1-206ENST00000566669 CTSHP09668 335 aa31.67■■■□□ 2.66
UBFD1-206ENST00000566669 EXOSC10Q01780 885 aaKnown RBP31.67■■■□□ 2.66
UBFD1-206ENST00000566669 PPFIA1Q13136 1202 aa31.67■■■□□ 2.66
UBFD1-206ENST00000566669 UBE2SQ16763 222 aa31.67■■■□□ 2.66
UBFD1-206ENST00000566669 RTN1Q16799 776 aa31.67■■■□□ 2.66
UBFD1-206ENST00000566669 IFIH1Q9BYX4 1025 aaKnown RBP31.67■■■□□ 2.66
UBFD1-206ENST00000566669 RIC8AQ9NPQ8 531 aa31.67■■■□□ 2.66
UBFD1-206ENST00000566669 NAPAP54920 295 aa31.66■■■□□ 2.66
UBFD1-206ENST00000566669 FAM117BQ6P1L5 589 aa31.66■■■□□ 2.66
UBFD1-206ENST00000566669 YME1L1Q96TA2 773 aa31.66■■■□□ 2.66
UBFD1-206ENST00000566669 AZI2Q9H6S1 392 aa31.66■■■□□ 2.66
UBFD1-206ENST00000566669 JPH1Q9HDC5 661 aaPredicted RBP31.66■■■□□ 2.66
UBFD1-206ENST00000566669 REV3LO60673 3130 aa31.66■■■□□ 2.66
UBFD1-206ENST00000566669 GSTTP1A0A1W2PQM5 241 aa31.65■■■□□ 2.66
UBFD1-206ENST00000566669 RRN3P2A6NIE6 340 aa31.65■■■□□ 2.66
UBFD1-206ENST00000566669 CDC45O75419 566 aa31.65■■■□□ 2.66
UBFD1-206ENST00000566669 TFF2Q03403 129 aa31.65■■■□□ 2.66
UBFD1-206ENST00000566669 FAM43BQ6ZT52 329 aaPredicted RBP31.65■■■□□ 2.66
UBFD1-206ENST00000566669 FBXO22Q8NEZ5 403 aa31.65■■■□□ 2.66
UBFD1-206ENST00000566669 GDPD5Q8WTR4 605 aa31.65■■■□□ 2.66
UBFD1-206ENST00000566669 MXRA8Q9BRK3 442 aa31.65■■■□□ 2.66
UBFD1-206ENST00000566669 SDF4Q9BRK5 362 aa31.65■■■□□ 2.66
UBFD1-206ENST00000566669 TUBE1Q9UJT0 475 aa31.65■■■□□ 2.66
UBFD1-206ENST00000566669 CNTNAP5Q8WYK1 1306 aa31.65■■■□□ 2.66
UBFD1-206ENST00000566669 COL4A6Q14031 1691 aa31.64■■■□□ 2.66
UBFD1-206ENST00000566669 CCDC196A0A1B0GTZ2 297 aa31.64■■■□□ 2.66
UBFD1-206ENST00000566669 hCG_1642624A0A1W2PR95 340 aa31.64■■■□□ 2.66
UBFD1-206ENST00000566669 MBLAC1A4D2B0 266 aaPredicted RBP31.64■■■□□ 2.66
UBFD1-206ENST00000566669 ADCY7P51828 1080 aa31.64■■■□□ 2.66
UBFD1-206ENST00000566669 AP3B2Q13367 1082 aa31.64■■■□□ 2.66
UBFD1-206ENST00000566669 GRIK4Q16099 956 aa31.64■■■□□ 2.66
UBFD1-206ENST00000566669 PTPROQ16827 1216 aa31.64■■■□□ 2.66
UBFD1-206ENST00000566669 KRT40Q6A162 431 aa31.64■■■□□ 2.66
UBFD1-206ENST00000566669 WWC2Q6AWC2 1192 aa31.64■■■□□ 2.66
UBFD1-206ENST00000566669 RAB11FIP4Q86YS3 637 aa31.64■■■□□ 2.66
UBFD1-206ENST00000566669 SLC9A2Q9UBY0 812 aa31.64■■■□□ 2.66
UBFD1-206ENST00000566669 NFASCO94856 1347 aa31.64■■■□□ 2.66
UBFD1-206ENST00000566669 XIRP2A4UGR9 3374 aa31.64■■■□□ 2.66
UBFD1-206ENST00000566669 MICAL3Q7RTP6 2002 aa31.63■■■□□ 2.65
UBFD1-206ENST00000566669 MCTP2Q6DN12 878 aa31.63■■■□□ 2.65
UBFD1-206ENST00000566669 KCNH7Q9NS40 1196 aa31.63■■■□□ 2.65
UBFD1-206ENST00000566669 MTUS1Q9ULD2 1270 aa31.63■■■□□ 2.65
UBFD1-206ENST00000566669 COL9A3Q14050 684 aaPredicted RBP31.62■■■□□ 2.65
UBFD1-206ENST00000566669 CEP55Q53EZ4 464 aa31.62■■■□□ 2.65
UBFD1-206ENST00000566669 BARHL2Q9NY43 387 aa31.62■■■□□ 2.65
UBFD1-206ENST00000566669 SLC26A2P50443 739 aa31.61■■■□□ 2.65
UBFD1-206ENST00000566669 SPRED2Q7Z698 418 aa31.61■■■□□ 2.65
UBFD1-206ENST00000566669 SQORQ9Y6N5 450 aa31.61■■■□□ 2.65
UBFD1-206ENST00000566669 V9GY48 417 aaPredicted RBP31.61■■■□□ 2.65
UBFD1-206ENST00000566669 GOLGA8AA7E2F4 631 aa31.6■■■□□ 2.65
UBFD1-206ENST00000566669 GOLGA8BA8MQT2 603 aa31.6■■■□□ 2.65
UBFD1-206ENST00000566669 CHRNA1P02708 482 aa31.6■■■□□ 2.65
UBFD1-206ENST00000566669 FGD1P98174 961 aa31.6■■■□□ 2.65
UBFD1-206ENST00000566669 FUT2Q10981 343 aa31.6■■■□□ 2.65
UBFD1-206ENST00000566669 IER5Q5VY09 327 aa31.6■■■□□ 2.65
UBFD1-206ENST00000566669 NIPA1Q7RTP0 329 aa31.6■■■□□ 2.65
UBFD1-206ENST00000566669 PLPPR4Q7Z2D5 763 aa31.6■■■□□ 2.65
UBFD1-206ENST00000566669 RWDD3Q9Y3V2 267 aa31.6■■■□□ 2.65
UBFD1-206ENST00000566669 TELO2Q9Y4R8 837 aa31.6■■■□□ 2.65
UBFD1-206ENST00000566669 KAT6AQ92794 2004 aa31.59■■■□□ 2.65
UBFD1-206ENST00000566669 SIP14410 1827 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms