RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 CAGE1Q8TC20 777 aa17.53■□□□□ 0.4
COMMD4-212ENST00000565517 TBC1D32Q96NH3 1257 aa17.53■□□□□ 0.4
COMMD4-212ENST00000565517 CTAGE1Q96RT6 745 aa17.53■□□□□ 0.4
COMMD4-212ENST00000565517 SMARCAD1Q9H4L7 1026 aa17.53■□□□□ 0.4
COMMD4-212ENST00000565517 TBC1D22BQ9NU19 505 aa17.53■□□□□ 0.4
COMMD4-212ENST00000565517 MYH9P35579 1960 aaKnown RBP17.53■□□□□ 0.4
COMMD4-212ENST00000565517 WDR81Q562E7 1941 aa17.53■□□□□ 0.4
COMMD4-212ENST00000565517 UMODL1Q5DID0 1318 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 EMSYQ7Z589 1322 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 CYP3A7-CYP3A51PA0A087WV96 503 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 DHX15O43143 795 aaKnown RBP17.52■□□□□ 0.4
COMMD4-212ENST00000565517 ST18O60284 1047 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 LGR5O75473 907 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 CYP3A7P24462 503 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 EPHB4P54760 987 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 RBL2Q08999 1139 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 PTK7Q13308 1070 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 NONOQ15233 471 aaKnown RBP eCLIP17.52■□□□□ 0.4
COMMD4-212ENST00000565517 SHHQ15465 462 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 PRR16Q569H4 304 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 MOXD1Q6UVY6 613 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 LENG9Q96B70 501 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 ZNF577Q9BSK1 485 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 WNT8AQ9H1J5 351 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 ERAP1Q9NZ08 941 aa17.52■□□□□ 0.4
COMMD4-212ENST00000565517 TANC1Q9C0D5 1861 aa17.52■□□□□ 0.39
COMMD4-212ENST00000565517 C17orf102A2RUQ5 167 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 JAK2O60674 1132 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 SMIM10L2AP0DMW4 78 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 SMIM10L2BP0DMW5 78 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 GNAT1P11488 350 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 CCL23P55773 120 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 ACTR2P61160 394 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 SCN5AQ14524 2016 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 C9orf50Q5SZB4 431 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 TRIM50Q86XT4 487 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 CCDC83Q8IWF9 413 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 RPUSD2Q8IZ73 545 aaKnown RBP17.51■□□□□ 0.39
COMMD4-212ENST00000565517 RETREG2Q8NC44 543 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 BACH2Q9BYV9 841 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 RNPEPQ9H4A4 650 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 IL23AQ9NPF7 189 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 GJB4Q9NTQ9 266 aa17.51■□□□□ 0.39
COMMD4-212ENST00000565517 IGKV6D-21A0A0A0MT36 114 aa17.5■□□□□ 0.39
COMMD4-212ENST00000565517 CCDC194A0A1B0GVG4 234 aa17.5■□□□□ 0.39
COMMD4-212ENST00000565517 DTNBO60941 627 aa17.5■□□□□ 0.39
COMMD4-212ENST00000565517 RFC2P35250 354 aa17.5■□□□□ 0.39
COMMD4-212ENST00000565517 HIC1Q14526 733 aa17.5■□□□□ 0.39
COMMD4-212ENST00000565517 Q4G0T1 1027 aa17.5■□□□□ 0.39
COMMD4-212ENST00000565517 TMEM240Q5SV17 173 aa17.5■□□□□ 0.39
COMMD4-212ENST00000565517 PSRC1Q6PGN9 363 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-212ENST00000565517 C16orf59Q7L2K0 433 aa17.5■□□□□ 0.39
COMMD4-212ENST00000565517 PLPPR4Q7Z2D5 763 aa17.5■□□□□ 0.39
COMMD4-212ENST00000565517 AFAP1L1Q8TED9 768 aa17.5■□□□□ 0.39
COMMD4-212ENST00000565517 GLG1Q92896 1179 aa17.5■□□□□ 0.39
COMMD4-212ENST00000565517 TNPO1Q92973 898 aaKnown RBP17.5■□□□□ 0.39
COMMD4-212ENST00000565517 MBOAT7Q96N66 472 aa17.5■□□□□ 0.39
COMMD4-212ENST00000565517 AZI2Q9H6S1 392 aa17.5■□□□□ 0.39
COMMD4-212ENST00000565517 BRMS1Q9HCU9 246 aa17.5■□□□□ 0.39
COMMD4-212ENST00000565517 NRCAMQ92823 1304 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 PARNO95453 639 aaKnown RBP17.49■□□□□ 0.39
COMMD4-212ENST00000565517 CCNE2O96020 404 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 PFKMP08237 780 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 IQCF3P0C7M6 154 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 KRT2P35908 639 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 MCM2P49736 904 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 SLC26A2P50443 739 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 ADAM17P78536 824 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 HMGN5P82970 282 aaKnown RBP17.49■□□□□ 0.39
COMMD4-212ENST00000565517 ZNF200P98182 395 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-212ENST00000565517 KRT76Q01546 638 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 TRIM29Q14134 588 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 ZNF746Q6NUN9 644 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-212ENST00000565517 GPR153Q6NV75 609 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 ABHD15Q6UXT9 468 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 SERINC5Q86VE9 423 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 DHX38Q92620 1227 aaKnown RBP17.49■□□□□ 0.39
COMMD4-212ENST00000565517 ATP6V0A1Q93050 837 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 PCYT2Q99447 389 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 RIT2Q99578 217 aa17.49■□□□□ 0.39
COMMD4-212ENST00000565517 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.49■□□□□ 0.39
COMMD4-212ENST00000565517 MSH4O15457 936 aa17.48■□□□□ 0.39
COMMD4-212ENST00000565517 MMP1P03956 469 aa17.48■□□□□ 0.39
COMMD4-212ENST00000565517 SELPP16109 830 aa17.48■□□□□ 0.39
COMMD4-212ENST00000565517 STAT5BP51692 787 aa17.48■□□□□ 0.39
COMMD4-212ENST00000565517 INF2Q27J81 1249 aa17.48■□□□□ 0.39
COMMD4-212ENST00000565517 TRIM71Q2Q1W2 868 aaKnown RBP17.48■□□□□ 0.39
COMMD4-212ENST00000565517 PPP4R3AQ6IN85 833 aa17.48■□□□□ 0.39
COMMD4-212ENST00000565517 NEK8Q86SG6 692 aa17.48■□□□□ 0.39
COMMD4-212ENST00000565517 SMAP1Q8IYB5 467 aaPredicted RBP17.48■□□□□ 0.39
COMMD4-212ENST00000565517 OXER1Q8TDS5 423 aa17.48■□□□□ 0.39
COMMD4-212ENST00000565517 SLC5A5Q92911 643 aa17.48■□□□□ 0.39
COMMD4-212ENST00000565517 TNFRSF25Q93038 417 aa17.48■□□□□ 0.39
COMMD4-212ENST00000565517 SCLYQ96I15 445 aa17.48■□□□□ 0.39
COMMD4-212ENST00000565517 NAP1L4Q99733 375 aaKnown RBP17.48■□□□□ 0.39
COMMD4-212ENST00000565517 SETD4Q9NVD3 440 aa17.48■□□□□ 0.39
COMMD4-212ENST00000565517 TCEAL9Q9UHQ7 104 aa17.48■□□□□ 0.39
COMMD4-212ENST00000565517 DDX39AO00148 427 aaKnown RBP17.47■□□□□ 0.39
COMMD4-212ENST00000565517 SOX1O00570 391 aaPredicted RBP17.47■□□□□ 0.39
COMMD4-212ENST00000565517 FGBP02675 491 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms