RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 TCF20Q9UGU0 1960 aaKnown RBP27.24■■□□□ 1.95
RAB40C-209ENST00000565511 KIF28PB7ZC32 967 aa27.24■■□□□ 1.95
RAB40C-209ENST00000565511 POU3F3P20264 500 aaPredicted RBP27.24■■□□□ 1.95
RAB40C-209ENST00000565511 ARHGAP4P98171 946 aa27.24■■□□□ 1.95
RAB40C-209ENST00000565511 GRB10Q13322 594 aa27.24■■□□□ 1.95
RAB40C-209ENST00000565511 PLEKHG4Q58EX7 1191 aa27.24■■□□□ 1.95
RAB40C-209ENST00000565511 RUFY4Q6ZNE9 571 aa27.24■■□□□ 1.95
RAB40C-209ENST00000565511 CYP2W1Q8TAV3 490 aa27.24■■□□□ 1.95
RAB40C-209ENST00000565511 BRWD1Q9NSI6 2320 aa27.23■■□□□ 1.95
RAB40C-209ENST00000565511 KLF18A0A0U1RQI7 1052 aa27.23■■□□□ 1.95
RAB40C-209ENST00000565511 STXBP3O00186 592 aa27.23■■□□□ 1.95
RAB40C-209ENST00000565511 ADAMTS3O15072 1205 aa27.23■■□□□ 1.95
RAB40C-209ENST00000565511 ZBTB43O43298 467 aa27.23■■□□□ 1.95
RAB40C-209ENST00000565511 IKBKEQ14164 716 aa27.23■■□□□ 1.95
RAB40C-209ENST00000565511 GDPD5Q8WTR4 605 aa27.23■■□□□ 1.95
RAB40C-209ENST00000565511 ASB2Q96Q27 587 aa27.23■■□□□ 1.95
RAB40C-209ENST00000565511 ZBED2Q9BTP6 218 aa27.23■■□□□ 1.95
RAB40C-209ENST00000565511 JADE2Q9NQC1 790 aa27.23■■□□□ 1.95
RAB40C-209ENST00000565511 RBM28Q9NW13 759 aaKnown RBP27.23■■□□□ 1.95
RAB40C-209ENST00000565511 ZNF215Q9UL58 517 aaPredicted RBP27.23■■□□□ 1.95
RAB40C-209ENST00000565511 NCOR1O75376 2440 aa27.22■■□□□ 1.95
RAB40C-209ENST00000565511 EMSYQ7Z589 1322 aa27.22■■□□□ 1.95
RAB40C-209ENST00000565511 SPDYE3A6NKU9 549 aa27.22■■□□□ 1.95
RAB40C-209ENST00000565511 GOLGA8AA7E2F4 631 aa27.22■■□□□ 1.95
RAB40C-209ENST00000565511 GOLGA8BA8MQT2 603 aa27.22■■□□□ 1.95
RAB40C-209ENST00000565511 TFF2Q03403 129 aa27.22■■□□□ 1.95
RAB40C-209ENST00000565511 MTMR1Q13613 665 aa27.22■■□□□ 1.95
RAB40C-209ENST00000565511 SYNE3Q6ZMZ3 975 aa27.22■■□□□ 1.95
RAB40C-209ENST00000565511 ATXN2LQ8WWM7 1075 aaKnown RBP27.22■■□□□ 1.95
RAB40C-209ENST00000565511 KCNB2Q92953 911 aa27.22■■□□□ 1.95
RAB40C-209ENST00000565511 PCYT2Q99447 389 aa27.22■■□□□ 1.95
RAB40C-209ENST00000565511 RIC8AQ9NPQ8 531 aa27.22■■□□□ 1.95
RAB40C-209ENST00000565511 TMEM260Q9NX78 707 aa27.22■■□□□ 1.95
RAB40C-209ENST00000565511 V9GY48 417 aaPredicted RBP27.22■■□□□ 1.95
RAB40C-209ENST00000565511 XIRP2A4UGR9 3374 aa27.22■■□□□ 1.95
RAB40C-209ENST00000565511 LINC01553A4QN01 128 aa27.21■■□□□ 1.95
RAB40C-209ENST00000565511 MARK3P27448 753 aa27.21■■□□□ 1.95
RAB40C-209ENST00000565511 NAPAP54920 295 aa27.21■■□□□ 1.95
RAB40C-209ENST00000565511 ZBTB10Q96DT7 871 aa27.21■■□□□ 1.95
RAB40C-209ENST00000565511 MTUS1Q9ULD2 1270 aa27.21■■□□□ 1.95
RAB40C-209ENST00000565511 GIMAP8Q8ND71 665 aaPredicted RBP27.2■■□□□ 1.94
RAB40C-209ENST00000565511 SYMPKQ92797 1274 aaKnown RBP27.2■■□□□ 1.94
RAB40C-209ENST00000565511 RAD9AQ99638 391 aa27.2■■□□□ 1.94
RAB40C-209ENST00000565511 EFCAB14O75071 495 aa27.19■■□□□ 1.94
RAB40C-209ENST00000565511 APOBRQ0VD83 1088 aa27.19■■□□□ 1.94
RAB40C-209ENST00000565511 PPP1R18Q6NYC8 613 aa27.19■■□□□ 1.94
RAB40C-209ENST00000565511 MYOCDQ8IZQ8 938 aa27.19■■□□□ 1.94
RAB40C-209ENST00000565511 SEPT1Q8WYJ6 367 aa27.19■■□□□ 1.94
RAB40C-209ENST00000565511 CDHR1Q96JP9 859 aa27.19■■□□□ 1.94
RAB40C-209ENST00000565511 MXRA8Q9BRK3 442 aa27.19■■□□□ 1.94
RAB40C-209ENST00000565511 ANO3Q9BYT9 981 aa27.19■■□□□ 1.94
RAB40C-209ENST00000565511 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.18■■□□□ 1.94
RAB40C-209ENST00000565511 CAND2O75155 1236 aa27.18■■□□□ 1.94
RAB40C-209ENST00000565511 CHRNA1P02708 482 aa27.18■■□□□ 1.94
RAB40C-209ENST00000565511 ARP10275 920 aa27.18■■□□□ 1.94
RAB40C-209ENST00000565511 ADD1P35611 737 aaKnown RBP27.18■■□□□ 1.94
RAB40C-209ENST00000565511 ADCY7P51828 1080 aa27.18■■□□□ 1.94
RAB40C-209ENST00000565511 MRPS5P82675 430 aaKnown RBP27.18■■□□□ 1.94
RAB40C-209ENST00000565511 PPFIA1Q13136 1202 aa27.18■■□□□ 1.94
RAB40C-209ENST00000565511 FAM26DQ5JW98 314 aa27.18■■□□□ 1.94
RAB40C-209ENST00000565511 MARCH8Q5T0T0 291 aa27.18■■□□□ 1.94
RAB40C-209ENST00000565511 KCNH7Q9NS40 1196 aa27.18■■□□□ 1.94
RAB40C-209ENST00000565511 BARHL2Q9NY43 387 aa27.18■■□□□ 1.94
RAB40C-209ENST00000565511 SNX14Q9Y5W7 946 aa27.18■■□□□ 1.94
RAB40C-209ENST00000565511 NRCAMQ92823 1304 aa27.17■■□□□ 1.94
RAB40C-209ENST00000565511 GTPBP6O43824 516 aaPredicted RBP27.17■■□□□ 1.94
RAB40C-209ENST00000565511 GNAT1P11488 350 aa27.17■■□□□ 1.94
RAB40C-209ENST00000565511 CLK2P49760 499 aaKnown RBP27.17■■□□□ 1.94
RAB40C-209ENST00000565511 ERVK-21P61565 698 aa27.17■■□□□ 1.94
RAB40C-209ENST00000565511 MGAT3Q09327 533 aa27.17■■□□□ 1.94
RAB40C-209ENST00000565511 ITGB3BPQ13352 177 aaPredicted RBP27.17■■□□□ 1.94
RAB40C-209ENST00000565511 KRT32Q14532 448 aa27.17■■□□□ 1.94
RAB40C-209ENST00000565511 GRIK4Q16099 956 aa27.17■■□□□ 1.94
RAB40C-209ENST00000565511 ADAMTS19Q8TE59 1207 aa27.17■■□□□ 1.94
RAB40C-209ENST00000565511 LOXHD1Q8IVV2 1947 aa27.17■■□□□ 1.94
RAB40C-209ENST00000565511 NLRC5Q86WI3 1866 aa27.17■■□□□ 1.94
RAB40C-209ENST00000565511 HTRA4P83105 476 aaPredicted RBP27.16■■□□□ 1.94
RAB40C-209ENST00000565511 Q6ZUG5 572 aa27.16■■□□□ 1.94
RAB40C-209ENST00000565511 SEPT8Q92599 483 aa27.16■■□□□ 1.94
RAB40C-209ENST00000565511 JAKMIP1Q96N16 626 aaKnown RBP27.16■■□□□ 1.94
RAB40C-209ENST00000565511 NECAB3Q96P71 396 aaPredicted RBP27.16■■□□□ 1.94
RAB40C-209ENST00000565511 C17orf80Q9BSJ5 609 aa27.16■■□□□ 1.94
RAB40C-209ENST00000565511 SUGCTQ9HAC7 445 aa27.16■■□□□ 1.94
RAB40C-209ENST00000565511 JPH1Q9HDC5 661 aaPredicted RBP27.16■■□□□ 1.94
RAB40C-209ENST00000565511 NAP1L2Q9ULW6 460 aaPredicted RBP27.16■■□□□ 1.94
RAB40C-209ENST00000565511 BDP1A6H8Y1 2624 aa27.15■■□□□ 1.94
RAB40C-209ENST00000565511 SMCO2A6NFE2 343 aa27.15■■□□□ 1.94
RAB40C-209ENST00000565511 AMHP03971 560 aa27.15■■□□□ 1.94
RAB40C-209ENST00000565511 HSPA4P34932 840 aa27.15■■□□□ 1.94
RAB40C-209ENST00000565511 KCNQ1P51787 676 aa27.15■■□□□ 1.94
RAB40C-209ENST00000565511 SKIV2LQ15477 1246 aaKnown RBP27.15■■□□□ 1.94
RAB40C-209ENST00000565511 SP7Q8TDD2 431 aaPredicted RBP27.15■■□□□ 1.94
RAB40C-209ENST00000565511 TGS1Q96RS0 853 aaKnown RBP27.15■■□□□ 1.94
RAB40C-209ENST00000565511 ERAP1Q9NZ08 941 aa27.15■■□□□ 1.94
RAB40C-209ENST00000565511 ATG2AQ2TAZ0 1938 aa27.14■■□□□ 1.94
RAB40C-209ENST00000565511 NID2Q14112 1375 aa27.14■■□□□ 1.94
RAB40C-209ENST00000565511 MBLAC1A4D2B0 266 aaPredicted RBP27.14■■□□□ 1.94
RAB40C-209ENST00000565511 GLG1Q92896 1179 aa27.14■■□□□ 1.94
RAB40C-209ENST00000565511 BRF1Q92994 677 aa27.14■■□□□ 1.94
RAB40C-209ENST00000565511 EHMT1Q9H9B1 1298 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms